Perognathus longimembris pacificus (Pacific pocket mouse): 125348337
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Entry
125348337 CDS
T08928
Symbol
Frem2
Name
(RefSeq) FRAS1-related extracellular matrix protein 2
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125348337 (Frem2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
plop04091
]
125348337 (Frem2)
Lectins [BR:
plop04091
]
C-Type lectins
Lecticans
125348337 (Frem2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
Motif
Other DBs
NCBI-GeneID:
125348337
NCBI-ProteinID:
XP_048197421
LinkDB
All DBs
Position
3:complement(48327611..48487863)
Genome browser
AA seq
3171 aa
AA seq
DB search
MPVTRTPAIASRARPAADPTSFLPTPAAAPWPPLLLLSLVSLLSAQPAAPGAALLSPGLP
GATGVPAEEAIVLANRGLRVPFGREVWLDPLHDLVLQVQPGDRCAVTVLDNDALAQRPGR
LSPKRFPCDFGPGEVRYSHMGARSPSRDRVRLQLRYDAPGGAIVLPLALEVEVVFTQLEV
VTRNLPLVVEELLGISNALDARSLEFAYQPETEECRVGILLGLGALPRYGELLHYPQIPG
GTREGGDPEPLLMDCRAFQELGVRYRHTASSSSPNRDWVPMVVELRSRGAPVGSPALKRE
HFQVLVRIRGGAENTAPKPSFVAMMMMEVDQFVLTALTPDMLAAEDAESPPDLLIFNLTS
PFQPGQGYLVSTDDRSLPLSSFTQRDLRLLKIAYQPPSEDSNEERLFELELEVVDPEGAA
SDPFAFMVVVKPMNTLAPVVTRNTGLILYEGQSRPLAGHAGSGLQNLVISDEDDLEAVRL
EVVAGLRHGHLVILGASSGTSAPKTFTVAELAAGQVVYQHDDRDGSLSDNLVLRMVDGGG
RHQVQFLFPITLVPVDDQPPVLNANTGLTLAEGDTVPIPPLALSATDMDSDDPLLRFVLE
SPFPTTGHLLLRQTHSPGEEQELTRGQWRKQGAFYERRVTEWQQQDITQGRLFYRHTGPH
SPGPVMDQFMFRVQDNHDPPNQSGLQRFMIRIHPVDRLPPELGSGCPLRMVVQESQLTPL
RKKWLRYTDLDTDDRELRYTVTQPPVDTDENHAPAPLGMLVLTDNPSVVVTHFTQAQVNH
HKIAYRPPAQELGVAARVAQFQFQVEDQAGNVAPGTFTLYLQPVDNQPPEILNTGFTLQE
KGHHVLTETELRVKDVDTDLSHISFTLTEAPKHGHLQVSGQILHAGEIFYVEDIKQGRIS
YLHSGDKSLADSCSLEVSDRHHVVPITLRVNVRQIEHEAPVLTLPAGKIESYLDVLENEA
TEVTANVIKGTDEYTDDLMLTFLIEDPPLYGEILVNGAPAEHFTQKDILEGSVIYTHTSG
EIGQLPKADSFNLSLSDTSQEWRVGGSTIQAVTVWVTILPVDSQAPEISVGEQFIVLEGD
KGVITLMHISAEDIDSPNDDLLCTIVIQPTSGYVENISPAPGSEKSRAGIAISAFTLKDL
RQGHINYIQSIHKGVEPVEDRFVFRCSDGINFSERQFFPIVIIPTNDEQPELFMREFMVM
EGMSLVIDTPILNAADADIPSDELTFVITQFPAHGHIMNQLINGTVLVESFTLDQIIESS
SIIYEHDDSETQEDSFVIKLTDGKYSVEKVVLIMVIPVDDETPRMTINNGLEIEIGETKT
INNKILMATDLDSEDKSLVYIIRYGPGHGFLQRQKPTGVFENITLGMNFTQDEVDRNVIQ
YVHVGQEGIRDLIKFDVTDGINALIDRYFYISIGSIDMVFPDVVSKGVSLKEGGKVTLTT
DLLSTSDLNSPDENLVFTITRAPMRGHLECTDQLGVSITSFTQLQLAGNKIYYIHTAEDE
VKMDSFEFQVTDGHNPVFRTFRISISDVDNKKPVVTIHRLVVSESESKLITPFELTVEDR
DTADQLLKFTITQVPVHGHLLFNHSKPVMEFTKQDLNENLISYKHDGTESSEDSFSFTVT
DGTHTDFYVFPDTVFETRRPQVMKIQILAVDNSVPQITVNKGASTLRILTTGHLGFMITN
KILKVEDRDSLHFSLRFIVTKAPQHGYLLNLGKGNHSITHFTQADIDDMKICYVLREGAN
ATSDVFHFAVEDSGGNRLTNQNFRLNWAWISFEKEYYLVNEDSKFLDVVLKRRGYLGETS
FISIGTRDGTAVKDKDFKGKAQKQVQFNPGQTRATWRVRILSDGAHEQSETFQVILSEPV
LAALEFPAVTTVEIVDPGDESTVFIPQSEYSIEEDVGELLIPLRRTGDVSQELMVICYTQ
QGTATGTVPTSVLSYSDYISRPEDHTSVIRFDREEREKACRIIVIDDSLYEEEESFQVLL
SMPMGGKMGSEFPGARVTILPDKDDEPIFYFGDVQYSVDESAGYVEARVWRTGTDLSRPA
SITVRSQKTDPPSADAGADYVGISRHLDFAPGVNMQRVRIVIVDDLGQPVLEGIEKFELV
LRMPMNAALGEPSKATVFINDSVSDLPKMQFKEKVHTGNENDGQVVAAIRRSGDVQFTSS
VRCYTRQGSAQVMMDFEERPNTDISTITFLPGETEKPCILELMDDVVYEEVEELRLVLGT
PQSNSPFGAAVGEQNETLIRIQDDADKSIIKFGETKFSVTEPKESRESVVVRIPVIRQGD
TSKVSIVRVHTKDGSATSGEDYHPVSEEIEFKEGETQHFVEIEILFDGVREMREAFTVHL
KPDENMVAETQVTKAIVYIEEINNMADVTFPSVPQIVSLLMYDDTSKAKEGAGPVSGYPV
VCVTACNPKYSDYDKTGSICASENINDTLTLYRWLISAPAGPDGVTSPMREVDFDTFFTS
SKMITLDSIYFQPGSRVQCAARAVNMDGNEGLELMSPIVTIGQEEGLCQPRVPGVVGAEP
FSAKLRYTGSEDPDFANLIKLTVTMPHIDGMLPVISTRELSNFELTLSPDGTRVGNHKCS
NLLDYTEVKTHHGFLTEATKNPEVIGETYPYQYNSPIRGPNTLRFYRNLNLEACLWEFVS
YYDMSELLTDCGGSIGTDGQVLNLVQSYVTLRVPLYVSYVFHSPVGVGGWQHFDLKSELR
LTFVYDTAILWNDGIGSPPEAELHGSLYPTSMRIGEEGRLAVNFKTEAQFHGLFVLSHPA
SFTSSVIMSADHPGLTFSLRLIRSEPTYNQPVQQWSFISDFAVRDYSGTYTVKLVPCTTP
SSQEYRLPVTCNPREPITFDLDIRFQQVSDPVAAEFSLNTHMYLLSKKSLWLSDGSMGFG
QESDVAFAEGDVIYGRVMVDPVQNLGDSFYCSIEKVFLCTGADGYVPKYSPANEEYGCLA
DSPSLFYRFKIVDKAQPETQATSFGNVLFNAKLAVDDPEAILLVNQPGSDGFKVDSTPLF
QVTLGREWYIHTIYTVRSKDNTLRGIGKRSVEYQYHSLVHHVDSQTTPTSRKKREVRSTP
PLAWEIGAENNRGTNIQHITLDRSNKRQIPQGRVPPDGILPGEFNSPSSDVSLVTALGSM
AVGLLTICLSIVAAMVCRRKTSLGSKDTAKGSGSSEPMMSPQNHHGDSSEV
NT seq
9516 nt
NT seq
+upstream
nt +downstream
nt
atgccagtcaccaggactcccgcgatcgcctcccgagcgcgccctgccgccgaccccacc
agctttctgccgacacctgcggcggcgccctggccgccactgcttctcctgtcactggta
agcctcctctccgcccagcccgctgcacccggcgctgcactgctgtccccgggtctcccg
ggggctactggggtccctgcggaggaagccatcgtgctggcgaaccgcggactccgggta
cctttcggacgggaagtgtggctggacccgctgcacgatctcgtgttgcaggtgcagccc
ggggaccgctgcgcggtgaccgtgctggacaacgacgcgctggcccagcggccgggccgc
ctcagtcccaagcgcttcccgtgcgacttcggccccggggaggtgcgttattcccacatg
ggcgcgcgcagcccatcccgggatcgagtccggctgcagctgcgctacgacgctcccggg
ggggccatcgtgctacctctagccctggaggtggaagtggtcttcacccagctggaggtg
gtgactcgaaacttacccctggtggtggaagaactattagggattagcaacgccctggat
gcgcgcagcttggagttcgcctaccagcccgagacggaggagtgtcgcgtgggcatcctg
ctgggcttgggtgcgctgcctcgctatggagaacttctccactacccgcagatccctgga
ggaacccgagaaggaggcgaccccgagcctctcttgatggactgcagagcgttccaggag
ctaggcgtccgttaccgccacacagcttctagtagttcgcccaacagggactgggtaccc
atggtggtggagctgcgttcccgaggagcgcccgtgggaagtccggctttaaaacgcgag
cacttccaggtgctggtgaggatccgcgggggagctgagaacactgcccccaagcccagt
ttcgtggccatgatgatgatggaggtagaccagtttgtactgactgccctgactccagat
atgctggcggccgaggatgctgagtctccgcctgacctgctcatcttcaaccttacttct
cccttccagcccgggcagggctacttggtgagcacggatgaccgtagcctgcccctctct
tccttcactcagagggacctgcgcctgctgaaaattgcctaccagcccccctctgaagac
tcgaacgaagaacgcctctttgagttggaactagaggttgtggatccggagggagcagcc
tcagacccctttgccttcatggtagtggtgaagcccatgaacacgctggccccagtggtc
acccggaacaccggccttattctctatgagggtcagtctcggcccctcgcgggtcatgca
ggcagtgggctgcagaacttggtcatcagtgacgaggatgacctggaagcagtacggctg
gaggtggtggctggactccggcatggtcaccttgtcattttaggggcttccagtggtacc
tctgctcccaagaccttcacagtggcagagctggctgctggccaggtggtctaccagcat
gatgacagagatggctcactgagtgacaacctggtcctccgcatggtggatggaggaggc
agacaccaagtccagttcctattccccatcaccttggtgcctgtggatgaccagccacct
gtcctcaatgccaacacggggctgacactggcagagggggacacagtgcccatcccaccc
cttgctctgagcgcaactgacatggattcagatgaccctctgcttcgttttgtgttggag
tctccctttcccaccacagggcatctgcttcttcgccaaactcattctcctggggaggaa
caggagcttaccaggggccagtggaggaagcagggagcattttatgaacgcagagtgacc
gagtggcagcagcaggacataacccaaggcaggttgttctatagacacacgggaccccac
agtcctgggccggtgatggaccagttcatgtttagagtccaggataaccatgaccctccg
aatcaatctgggcttcagaggttcatgatacgcattcatcccgtggatcgtctccctccg
gagctgggtagcggctgtccccttcggatggtggtacaagaatctcagcttacgccccta
aggaagaagtggctgcgttacactgacctggacacagatgaccgagaacttcgttacacc
gtgacccaaccccccgtggacacagatgaaaaccatgctcctgcccctctgggtatgttg
gtcctgactgataacccctcagttgtggttacccatttcacccaagcacaggtcaaccac
cataaaattgcttacagacctccagctcaagaactgggagtggctgctcgagtggcccag
tttcagttccaggtggaggaccaagctggcaatgtggctcctggcaccttcaccctttac
ttgcagcctgtggacaaccagccccctgagatcctcaacacgggcttcactcttcaggag
aagggccaccacgtcctgactgagactgagttgcgtgtgaaggacgtcgatactgacctg
agccatatctctttcactctcactgaggcacccaaacatggccacctgcaagtgtctgga
cagatactgcatgcaggagagatcttctatgtggaagacataaaacaaggccggatttcc
taccttcattctggggacaagtctttggctgacagctgctccttggaggtgagtgacaga
caccatgtagtgccaatcacgcttagagtgaatgttcgtcagatagaacatgaggcacct
gtgctgacccttcctgctgggaaaatagaatcttatctagatgtcttagaaaatgaggct
actgaagtcacggctaatgttattaaggggactgatgagtacacagatgatttgatgttg
actttcctcatagaagacccacccttgtatggggaaatcctggtgaatggagcgccagca
gagcactttactcaaaaggacattttggagggctctgtcatctatactcacaccagtggt
gagattggtcagttgcccaaagcagattcttttaacctgagtctgtcagatacatctcaa
gaatggagagttggtgggagtaccatccaagctgttactgtatgggtgaccatcctgcct
gtggatagccaggccccagaaatttcagtgggtgaacagtttatagtattggaaggtgat
aaaggtgttatcaccttgatgcacatcagtgctgaagatattgattccccaaacgatgac
ctcttatgtaccatagtgattcagccaacttcaggttacgtggagaacatttctcccgcc
ccaggctctgagaaatcaagagcaggcattgccatcagtgccttcactctgaaagatctg
aggcagggtcacattaactacatccagagcatccataaaggggtggagcctgtggaagat
cgatttgtattccgttgctccgatggcattaacttctcagagagacagtttttccccatt
gtcatcattcctaccaatgatgaacagccagaactgtttatgagagaatttatggtgatg
gaaggaatgagcctcgtgattgacacccccattctcaatgctgctgatgctgacatcccc
tcagatgagttaacttttgtcatcacccagtttcctgctcatggtcatatcatgaaccag
ttgataaatggtactgttttggtggaaagcttcaccctggaccaaatcatagaaagttcc
agcattatctatgagcatgatgactctgagacccaggaagacagttttgtgattaaacta
acagatggcaagtactctgtggaaaaggtggtcctcatcatggttattcctgtggacgac
gagacccccagaatgaccattaataatggactggaaatagaaattggagaaacaaaaaca
atcaacaacaaaatactgatggccactgatttggactctgaagacaaatccttggtttat
attatccgttatgggccagggcatggctttctacagcgacaaaaacctacaggtgtcttt
gaaaatatcacactgggcatgaactttacccaggatgaagtggacagaaatgtcattcaa
tatgtccacgttgggcaggaaggcattcgggatctaattaaatttgatgtgaccgatgga
atcaatgccctcatagatcgctacttttatatctccattgggagcattgacatggtcttt
cctgatgtggtcagcaaaggagtctccttaaaggaaggtggtaaggtcacactcacaacg
gacctcctaagcaccagtgacttgaacagtcctgatgagaacttggtctttaccatcacc
cgggctcccatgagaggccatctagagtgcacagaccagctgggagtctccatcacatct
ttcactcagctccaactagctggtaacaaaatctactacattcacacagctgaggatgag
gtaaagatggacagctttgagtttcaagtcaccgatgggcataatcccgtctttcgcaca
ttccgtatctccattagtgatgtagacaacaaaaagccggtggtcaccatacataggttg
gtggtcagtgaaagcgagagcaagctgatcactcccttcgagctcactgtggaagataga
gatactgcagaccaactcttgaaattcaccatcacccaggtccctgttcatggtcatctc
ctcttcaaccatagcaaacctgtcatggagtttaccaaacaagacttgaatgaaaactta
atcagctacaaacatgatggcacagagtccagtgaagatagcttctctttcactgtaact
gatggtacccatacagacttctatgtttttcctgatacagtatttgaaacaaggagaccc
caagtgatgaagatccagatcttagctgttgacaatagtgtcccccaaattacagtcaat
aaaggggcctctacactccgcatcctgaccactggccacttggggttcatgatcacaaac
aaaatattgaaagtggaggacagagacagcctacacttttctcttaggtttattgtgacc
aaggcccctcaacatggatacctcctcaacctgggcaaaggcaaccacagtatcacccat
tttacccaagctgatattgatgacatgaaaatctgctacgtgttacgagaaggggcaaat
gccacaagtgacgtgtttcattttgctgttgaagatagtgggggaaacaggttaaccaac
cagaattttcgtctgaattgggcatggatctcctttgaaaaggaatattatctggtgaat
gaagactccaaatttttagatgttgttcttaaacgcagaggttacttgggagaaacttca
tttataagtattggcacgagagacgggactgcggtgaaagacaaggacttcaagggcaaa
gcacagaagcaagtgcaattcaaccccggccaaaccagggccacgtggagagtgcgcatc
ctgagcgatggcgcgcatgagcagtctgagaccttccaagtgattctctcggagccagtg
ctggctgccctggagttccccgcagtgaccacagtggagatcgtggaccccggagatgag
tcgactgtgttcatcccccagtctgaatacagcattgaagaagacgtgggtgaactgctc
atccctctccggaggacaggggacgtgagccaggagctgatggtgatctgctacacgcag
caaggaacagcaactggaactgtgccgacctccgtgttgtcttactctgattacatatcc
aggcctgaggaccacaccagtgtcattcgctttgacagagaggaacgggaaaaagcatgt
cgcataattgttattgatgactccttgtacgaagaggaggagagcttccaagtccttctg
agcatgcccatgggtgggaaaatgggctcagagttcccaggagctcgggttaccatcctc
cccgacaaagatgatgaacccatcttctacttcggcgacgtccagtactcggtggacgag
agcgccggctatgtggaggcgcgggtgtggaggacaggcactgacctctccaggccagcc
agcatcacagtgagatcccagaaaacggacccaccctctgccgatgctggagctgactat
gtgggaatcagccgccatttggatttcgcccccggagttaacatgcagagagttcggatt
gtcattgtggacgaccttggacagccagtgctggagggaattgagaaatttgagctggtg
cttcgtatgcctatgaatgctgcacttggcgagcccagcaaagccaccgtgttcataaat
gactctgtctccgatttgccaaagatgcaattcaaagaaaaagtgcatactggcaatgaa
aatgatgggcaggtagttgcagcaatccgcaggagcggggatgtccagttcacgtcttcc
gtgagatgctacacccggcagggctccgcacaggtgatgatggacttcgaagaacgtccc
aacactgacatctccaccatcacattcctcccgggtgagacagaaaagccatgcatcttg
gaattgatggatgatgtggtctatgaggaggtggaggagttgcgcctggtactgggcact
ccacaaagcaactctccctttggggctgccgttggtgaacaaaacgaaaccctgataagg
atacaagatgatgccgataagtccatcatcaaatttggagaaaccaaatttagcgtcact
gaacctaaagaatcaagagagtcggtggtggtcagaattcctgtgattcgccaaggagat
acctccaaggtttccatcgtgagggtccacaccaaggacggctctgccacctctggagaa
gactatcaccctgtgtccgaagaaattgaatttaaggaaggagaaacgcagcattttgtt
gaaattgaaatactatttgatggggtcagagagatgagagaggccttcactgtccactta
aaacccgatgaaaacatggtagcagaaacgcaggtcaccaaagccattgtgtacattgaa
gaaattaacaacatggcggatgtcacatttccttctgttcctcaaattgtgtccttgctg
atgtatgatgacacttccaaagctaaagagggcgctggacctgtgtctggctatccagtc
gtctgtgttacagcctgcaaccccaaatattctgactatgataaaacaggatctatttgt
gcaagcgagaacatcaacgacactttgaccctctaccggtggctgatcagtgctccagcc
ggccctgacggtgtgaccagccccatgagagaggtggacttcgacactttttttacatcc
tccaagatgataactttagactccatatacttccagcctggctctcgagtgcagtgtgca
gctcgagctgtgaacatggatggcaatgaaggcttggagctgatgagcccaattgtaacc
attggccaagaagaaggcctttgtcaaccacgtgtgcctggagtcgtgggggccgagccc
ttctcagctaagttgcgctacacaggctccgaagacccagactttgcaaacctgatcaaa
ctcacggtcacgatgccacacatcgacggcatgctccctgtgatctccactcgagagctc
tccaacttcgagctgaccctcagccctgacggtacaagagttgggaaccacaagtgctcc
aacctcctggactacactgaggtgaagacccaccacggttttctcactgaggccaccaaa
aaccccgaagtcatcggagagacctatccttaccagtacaactcgcccatcagaggcccc
aacaccttacgcttctaccgtaacttgaacctggaggcctgcctgtgggagtttgtcagc
tactatgacatgtcggagctcctcaccgactgcggaggctccatcggcaccgatggccag
gtcctcaacttagtacagtcctacgtgacccttcgagttcctctgtatgtttcctacgtg
ttccattccccagtcggggttggaggctggcagcattttgacttgaagtcagagcttcgt
ttgacttttgtgtacgacactgccatcttgtggaatgatggcattgggagcccaccggaa
gccgaactccatggttctctctacccaaccagtatgcgcataggtgaagaggggcgcctg
gccgtgaacttcaagacagaggctcagttccatggcttgtttgtgctatcacatcctgcg
tctttcacaagctcagtgatcatgtcagctgaccatccaggcctgaccttttcgctccgc
ctcataaggagtgaaccaacctataaccagcctgtacagcaatggagcttcatctctgac
tttgcagtacgtgactactcgggaacctacaccgtgaagctggtgccatgcactacccca
tccagtcaggagtaccgcctgccagtcacctgcaaccccagagagcccatcacctttgac
cttgacattcgattccagcaggtcagtgatcctgtggccgcagagttcagcctgaacacc
cacatgtacctgctctccaagaagagtctctggttgtcagatggctccatgggattcggg
caagagagcgacgttgctttcgcagaaggggatgtgatttatggtcgtgtcatggtagat
cctgtccagaatctgggtgactccttttactgcagcattgagaaagtgttcctgtgcaca
ggcgctgatggctatgtgcccaagtacagtccagcaaatgaagaatatggctgcctggca
gattctccttcactcttctatagattcaaaattgtggacaaagctcagccagagacacaa
gctaccagttttggaaatgtcctctttaatgccaaactagccgtggatgatccagaagcc
attcttctagtgaatcaacctggatccgatggatttaaagttgactcaacaccactattt
caggttactctgggccgagaatggtacatacacacaatctatacggtaagatccaaagac
aacacccttcgagggattggcaaaaggagtgtggagtaccagtaccactctctggtgcat
cacgtggattcccagacaactccaaccagcaggaagaagagagaggtcagaagcacaccc
ccgctggcatgggaaattggtgctgaaaacaaccgaggcacaaacatccagcatatcacc
ctggaccgcagcaacaagaggcaaatcccgcaagggcgagttcctcctgatggcattctg
cccggagagttcaacagtcccagctcagatgtcagtctggtcactgccctgggcagcatg
gcggtgggattactcaccatctgcctctccatcgttgcagccatggtgtgccggaggaag
acaagcctcggatcgaaggatactgccaagggctcgggcagcagtgagcccatgatgtcc
ccacaaaaccatcatggcgacagctcggaggtgtga
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integrated database retrieval system
