Perognathus longimembris pacificus (Pacific pocket mouse): 125348346
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Entry
125348346 CDS
T08928
Symbol
Exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125348346 (Exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125348346 (Exosc8)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
125348346 (Exosc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
125348346
NCBI-ProteinID:
XP_048197451
LinkDB
All DBs
Position
3:complement(49649014..49657883)
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AA seq
276 aa
AA seq
DB search
MAAGFKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVIC
GVKAEFAAPPTDAPDKGYVVPNVDLPPLCSSRFRAGPPGEEAQVASQFIADVIENSQIIQ
KEDLCISPGKLAWVLYCDLICLDYDGNILDACTFALLTALKNVQLPEVTINEETALAQVN
LKKKSYLNIRTHPVATSFAVFDDTLLIVDPTGEEERLATGTLTVVMDEESRLCCLHKPGG
SGLTGAKLQDCMSRAVTRHKEVKKLMDEVIKSIKPK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgggttcaagactgtggaacctctggagtattacaggagatttcttaaagaa
aactgtcgtccagatggaagagaactcggcgaatttcgaaccactactgtcaacataggt
tcaatttctacagcagatggttctgctttagtcaagctgggaaatacgacagtaatttgt
ggagttaaagcggaatttgcagcaccaccaacggatgcccctgataaaggatatgttgta
cctaacgtggatctaccacctctgtgttcatcgcgatttcgggctggacctccaggagaa
gaggcccaagtggctagccagttcattgcggatgtcattgaaaattcacagataattcag
aaagaagacttgtgcatttctccgggaaagcttgcttgggttctatactgtgatctcatc
tgcctcgactatgatgggaacattttggatgcctgtacatttgccttgttaacggctcta
aaaaatgtacagctgcctgaagtcactataaatgaagaaactgctttagcacaagttaat
ttaaagaagaaaagttatttgaatattagaacacatccagttgcaacttcctttgctgtg
tttgatgacactttgctaatagttgatcctactggagaagaagaacgtctggcaacagga
actttaacagtagtaatggacgaggaaagcaggctctgttgtcttcacaaaccaggtgga
agtgggctgactggtgctaaacttcaggactgtatgagtcgtgctgttacaagacacaaa
gaagtaaaaaaattaatggatgaagtaattaagagtataaaacccaaataa
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