Perognathus longimembris pacificus (Pacific pocket mouse): 125348490
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Entry
125348490 CDS
T08928
Symbol
Mbd3
Name
(RefSeq) methyl-CpG-binding domain protein 3 isoform X1
KO
K11591
methyl-CpG-binding domain protein 3
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125348490 (Mbd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plop03036
]
125348490 (Mbd3)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
125348490 (Mbd3)
Chromatin remodeling factors
NuRD complex
125348490 (Mbd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD_C
MBDa
MBD
DUF7028
Motif
Other DBs
NCBI-GeneID:
125348490
NCBI-ProteinID:
XP_048197696
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All DBs
Position
3:64934395..64943693
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AA seq
291 aa
AA seq
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MERKRWECPALPQGWEREEVPRRSGLSAGHRDVFYYSPSGKKFRSKPQLARYLGGSMDLS
TFDFRTGKMLMSKMNKSRQRVRYDSSNQVKGKPDLNTALPVRQTASIFKQPVTKITNHPS
NKVKSDPQKAVDQPRQLFWEKKLSGLSAFDIAEELVRTMDLPKGLQGVGPGCTDETLLSA
IASALHTSTMPITGQLSAAVEKNPGVWLNTTQPLCKAFMVTDEDIRKQEELVQQVRKRLE
EALMADMLAHVEELARDGEAPLDKACVDEDDDDEDEDEDEEPEPDQELERV
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggagcggaagaggtgggagtgcccggcgctcccgcagggctgggagagggaagaagtg
cccagaaggtcggggctgtcggccggccacagggatgtcttttactatagccccagtggg
aagaagttccgcagcaagccccagctggcgcgctacctggggggctccatggacttgagc
acctttgacttccgcactggcaagatgctgatgagcaagatgaacaagagtcggcagcgc
gtacgctatgactcctccaaccaggtcaagggcaagccagacctgaacacagccctgcct
gtgcggcagacagcgtccatcttcaagcagccagtgaccaagatcaccaaccaccctagc
aacaaagtgaagagcgatccccagaaggcagtggaccagccgaggcagctgttctgggag
aagaagctgagtggactgagtgcctttgacattgctgaggagctagtcaggacgatggac
ctgcccaagggcctgcaaggggtgggccccgggtgtacagacgagacactgctgtcggcc
atcgccagcgccctgcacaccagcaccatgcccatcacagggcagctctcagctgctgtg
gagaagaatcccggtgtgtggctgaacaccacacagcccctgtgcaaagctttcatggtg
accgacgaggacatcaggaaacaggaagagctggtgcagcaggttcggaagcggctggag
gaggcactgatggctgacatgctggcccatgtggaggagctggcccgcgatggtgaggcg
ccattggacaaggcctgcgtggacgaggatgatgacgatgaggatgaggatgaagatgag
gagcctgagccagaccaggagctggagcgtgtctag
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