Perognathus longimembris pacificus (Pacific pocket mouse): 125348515
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Entry
125348515 CDS
T08928
Symbol
Sbno2
Name
(RefSeq) protein strawberry notch homolog 2 isoform X1
KO
K26273
protein strawberry notch
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plop03036
]
125348515 (Sbno2)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125348515 (Sbno2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Motif
Other DBs
NCBI-GeneID:
125348515
NCBI-ProteinID:
XP_048197754
LinkDB
All DBs
Position
3:65320237..65392201
Genome browser
AA seq
1389 aa
AA seq
DB search
MAGHDAAPTDTQGKTQIAVPVASVCGTPTCHLMLAVGPAMDGECPQHELPPAGSIPLQNA
LLHCPWWGSFSQAPYPAFSSESPQFMNSTFLNGHPCPDTSYASVATASSFLPKSGDFPQD
SSYLEDLSNASIFSSSVDSLSDIVDTPDFLPADSLSQVPTIWDVSTAPATNEKLFLPSVP
FPSLKEPVTSLPSTPLLVSYQSGNPPEEEEEAEEEEETEELGHAETYADYVPSKSKIGKQ
HPDRVVETSTLSSVPPPDITYTLALPTPDSGALSALQLEAITYACQQHEVVLPNGQRAGF
LIGDGAGVGKGRTVAGIIMENYLCGRKKALWFSVSNDLKYDAERDLRDIEAPGIAVHALN
KIKYGDNTTSEGVLFATYSALIGESQAGGQHRTRLRQILQWCGEAFDGVIVFDECHKAKN
ASSTKMGKAVLDLQNKLPLARVVYASATGASEPRNMIYMSRLGIWGEGTPFRTFEEFLHA
IEKRGVGAMEIVAMDMKVSGMYIARQLSFSGVTFRIEEIPLPPAFEHVYNRAALLWAEAL
GVFQQAADWIGLESRKSLWGQFWSAHQRFFKYLCIAAKVRRLVELAREELARDKCVVIGL
QSTGEARTREVLDENEGRLDCFVSAAEGVFLSLIQKHFPSTRRKRDRGGGSKRKRRLRGR
GAKVPKLALEAGVIRISDDSSTESDPGLDSDFNSSPESLVDDDVVIVDATGLPVDDRGPL
CPPQRDPHGPGVLERVERLKQDLLAKVRALGRELPVNTLDELIDQLGGPECVAEMTGRKG
RVVSRPDGTVAFESRAEQGLSIDHVNLREKQRFMSGEKLVAIISEASSSGVSLQADRRVK
NQRRRVHMTLELPWSADRAIQQFGRTHRSNQVSAPEYVFLISELAGERRFASIVAKRLES
LGALTHGDRRATESRDLSKYNFENKYGARALSSVLTTILSQIDNKVPLPQGYPGGDAAFF
RDMKQGLLSVGIGGRESRSGCLDVEKDCSIAKFLNRILGLEVHKQNALFQYFSDTFDHLI
EADKKEGRYDMGILDLAPGIDEIYEESQQVFLAPGHPQDGQVVFYKISVDRGLKWEEAFT
KSLELVGPYDGFYLSYKVRGNKPSCLLAEQNRGKHFTVYKPNVGRQNHLETLDSLCRRFH
RVTAEEAREHWESNYTYSLTHCSHTAWNQHCRLVQEGKDCTQGLRLRHHYMLCGALLRVW
GRIAAVMADVSSSSYLQIVRLKTKDKKKQVGIKIPESCVRRVLQELRLMDADVKRRGLPD
PGLPARPLTPRMLPLPCDPGEVLDLTYSPPALEAFPAPLPRFTFPPPPPESRALLQLGAP
DPTAADPAALAHQSCDINFREVLEDMLRSLNAGPSEPPGPLVGAGGAGVGGGGPERQSVI
QFSPPFPNS
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atggcaggacatgatgccgcgcccactgacacacaaggaaaaacccagatagctgtcccc
gtggcctcagtctgtggaacccccacctgccacctgatgctcgcagtgggacctgccatg
gatggggagtgtcctcagcatgaactcccgccagcgggtagcatcccactgcagaatgcc
ctgctgcactgtccatggtggggcagtttctctcaggcgccatatccagccttctccagc
gagagccctcagttcatgaactccacgttcctcaacggccatccttgcccagacaccagc
tatgcttctgtagccactgcctccagcttcctgccaaagagtggtgacttccctcaggac
tcctcatacctcgaggacctctccaatgcctccatcttctcctcatccgtggactccctg
tctgatatcgtggacacacccgacttcctgccagcagacagcctcagccaagtgcccacc
atctgggatgtcagcactgccccagccaccaatgagaagctgttcctgcccagtgtgcca
tttccaagcctcaaggaacccgtgacctccctccccagcactccgcttcttgtcagctat
cagtcagggaacccaccagaggaggaggaagaggccgaggaggaggaggagactgaggag
ctgggccatgcagagacctacgctgactatgtgccatccaaatccaagatcggtaagcag
cacccagaccgtgtagtggagaccagcacgctgtccagcgtcccaccacccgacatcacc
tacaccttggcactgcccacccctgacagtggggccctgtctgccctgcagctggaggcc
ataacctatgcatgccagcaacatgaggtcgtgctgcctaatgggcagcgcgctggcttc
ctcatcggggacggagctggtgtgggcaagggccgcacggtggctggcatcatcatggag
aactacctgtgtggcaggaagaaggccttgtggttcagtgtctcaaatgacctcaagtac
gatgcagagcgcgacctacgagacatagaggccccaggcatcgctgtgcatgcactgaac
aagatcaagtacggtgacaacactacctcagagggcgtcctcttcgctacctactctgcc
ctgatcggggagagccaggcaggtgggcagcaccgcacccgcttgcggcagatcctccag
tggtgcggggaggccttcgatggcgttatcgtgtttgacgagtgccacaaagccaagaat
gccagctctaccaagatgggcaaggctgtcctggacctgcagaacaagctgcccctggcc
agggtggtctacgccagcgccacaggtgcctctgagccacggaacatgatctatatgagc
cgcctgggcatctggggtgagggcacacccttccgcaccttcgaggagttcctgcatgcc
attgagaagaggggtgtgggtgccatggagattgtggccatggatatgaaggtcagcggg
atgtacatagcacgtcagctcagcttctctggagtcaccttccgcattgaggaaatccca
ctgccccctgcctttgaacacgtctacaaccgagcagccctgctgtgggcagaggcgctg
ggtgtgttccagcaggcagcggactggatcggcctggagtcacgcaagtccctctggggc
cagttctggtcagcccaccagcgcttcttcaagtacctatgcatcgctgccaaggtgcgc
cggctggtggagctagcccgcgaagaactggcccgtgacaagtgcgtggtcatcgggctg
cagtccacgggtgaagcacggacccgggaggtgttggatgaaaacgaggggcggctcgac
tgctttgtctctgctgctgaaggcgtcttcctgtccctgatccagaagcactttccttcc
accagaaggaagcgggaccgaggagggggcagtaagaggaaacggcggctgcggggccgc
ggtgccaaggtccccaagctggcattggaggcaggcgtgatccgcatcagtgatgacagc
agcactgagtcggaccctggcctggacagtgacttcaactcctccccagagtccctggtg
gatgatgatgtggtcattgtggatgccactgggctccctgtggatgaccgaggtcctctc
tgccctcctcagagggacccacatggccccggtgtcctggagcgtgtggagaggctgaag
caggacctgctggccaaggtgcgtgcactgggccgggagcttcccgtcaacactctggac
gagctcatcgaccagcttggaggccccgagtgtgtggctgagatgactggcaggaaaggc
cgtgtcgtgtccagacctgatgggacagtggccttcgagtcacgggcagaacagggactg
tccatcgatcatgtgaacctcagggagaaacagcgcttcatgagtggggagaagctcgtg
gctatcatctccgaggcctccagctcaggtgtctccctccaagctgaccgtcgagtcaag
aaccagcggcggcgtgtccacatgaccctcgagttgccctggagtgctgaccgtgccatc
cagcaatttggccgcacccaccggtccaaccaggtctcagcacctgagtatgtcttcctc
atctcggagctggcaggggagcgccggttcgcctccattgtagccaagcggcttgagagt
ctgggtgctctgacccacggagaccgtcgtgccaccgagtcccgagacttgagcaagtac
aactttgagaacaagtatggcgcccgggctctcagcagcgtccttaccaccattctgagc
caaatagacaacaaggtgcctttgccccagggctaccctggaggggatgccgctttcttc
cgagatatgaagcaaggcctgctgtcagtcggcattggcgggcgagagtcacggtctggc
tgcctggatgtagagaaggactgctccatcgccaagttcctgaaccgcatcctggggctg
gaggtgcacaagcagaatgcgctcttccagtacttctcagacacctttgatcacctcatc
gaggcggacaagaaggagggcagatacgacatgggcatcctggacctggctcctggcatc
gatgagatctatgaggagagccagcaggtgttcctggcccctgggcacccacaggacggg
caggtggtcttctacaagatcagcgtggaccgaggcttgaagtgggaggaggcattcacc
aagtcactggagctcgtgggcccctacgacggcttctacctctcctataaggtccggggc
aacaagcccagctgtctccttgcagagcagaaccgaggcaagcacttcactgtgtacaag
cccaacgtaggccggcagaaccacctagaaaccctggacagcctatgccgcaggttccac
cgggtcactgccgaggaggccagggagcactgggaaagcaactacacctactcgctgaca
cactgcagccacactgcctggaaccagcactgccggctggtgcaggagggcaaggactgc
acgcagggcttgcgcctgcggcaccactacatgctgtgtggggccctgctgcgcgtgtgg
ggccgcattgcggccgtgatggcggacgtcagcagcagcagctacctgcagatcgtgcgg
ctgaagaccaaagacaagaagaagcaagtgggcatcaagatcccagagagctgcgtgcgc
cgcgtgctgcaggagctgcggctgatggacgccgacgtcaagcgccggggcctgccggac
cccggactcccggcgcggcccctcaccccgcgcatgctgccactaccctgcgacccaggc
gaggttctggatctgacctacagtcccccggccttggaggccttcccggccccgctgccc
cgcttcaccttcccgccgccgcctcccgagtcccgcgccctgctgcagctgggcgcgccc
gaccccactgctgccgaccccgccgccttggcgcaccagagctgcgacattaacttcagg
gaggtgttggaggacatgctgcgctccctcaacgccgggccctcggagcccccaggcccg
ctggtgggtgcggggggcgcaggggtcggcggcgggggcccggagaggcagagcgtcatc
cagttcagccccccgttccccaactcctag
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