Perognathus longimembris pacificus (Pacific pocket mouse): 125348540
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Entry
125348540 CDS
T08928
Symbol
Polrmt
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase, mitochondrial
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
plop03029
]
125348540 (Polrmt)
Enzymes [BR:
plop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125348540 (Polrmt)
Mitochondrial biogenesis [BR:
plop03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
125348540 (Polrmt)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
ArfGap
Motif
Other DBs
NCBI-GeneID:
125348540
NCBI-ProteinID:
XP_048197794
LinkDB
All DBs
Position
3:65779204..65792079
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AA seq
1210 aa
AA seq
DB search
MSALCWTRGATGFRRTLRYSGRTRPAALEGTMTALGGPRRSSSASPRELDRRKDWGLAEL
LEVLEARVRQLQAESLSEVTVNRVEVAQVPTAQAVWEQKLKREKQNQQKRQPQIEKWLKK
QTQKQAYKLKHPGLLLEPQFQSQQLINCLDNKKVHSPWEEKLEKVLQQVPQKLSVETQAP
PAIEEEEEDEKQVSGRPQNMLSFLQGCLSADQLPLAHHMLVTQHSALQRRKHPPLTLAMY
NVVMLGWARKGSFKELVYVFFMVKDAGLTPDLQSYAAALQCMGRVDQDAHTIKRCVKQMA
RDGLQLEQLFTDLSMSSEERAAILRAVLKAQPDFRVPQRPPQVNTSTLLSDIYAPEGLKL
YPKLHXPXKTMQDLFKDQLHLEMQATISVESVEKPPTLTEQVLKARKTLNALRTQWKAAL
LRVLQETKTRMGCEAHQGQPSLYPFLSLLSEKDLVELLMQTLQTLPSQGESLMFMAHNLS
MHLFNRHAVQQKKLSNELQHLERRYMQYVRLLASDAQVDTPCLPRQHWEALGENDEAPQQ
SWPVPLILKLGKHLVEMMVQALEMPHNLATSQGSHKLIPVLYHVYSFRSFRQIGIVKPHP
AYTQLLATAAETTLTFESAHMPMLCPPLPWTSSNTGAFLLSHTKLMRGVDSNMEHQRLLX
NCPTAELHGALDSLTQLGNCAWCVNGRLLDLVLQVFRDKGSVRLGVPPPISEAPQPPRXV
LPPHVSLIQKADIRRELLHCQKVTREMHSMRMEALYRLSLAQHLRGRIFWLPHNMDFRGR
TYPCPPHFNHLGSDLARALLQFAEGRPLGPHGLDWLKIHLINLTGFKKRDSLKTRLAFAN
QMMDDILDSADQPMTGRKWWMEADEPWQTLACCMEVAQAVRSPDPAAFVSHLPVHQDGSC
NGLQHYTALGRDSIGAASVNLLPSDLPQDVYSEVAAQVEVFRMQDVKKGDPMAQLLEGFI
SRKVVKQTVMTVVYGVTRYGGRLQIEKRLRELSNFPQDYVWEASHYLVRLVFKSLQEMFS
GTRAIQQWLSESARLIAQAGHAVEWVTPLGVPVIQPYYQDTKYQVHGGIQSITCTTTVNS
NQKPNTLKQRNGFPPNFIHSLDSTHMMLTALHCYRKGLTFVSVHDCFWTHAADIPVMNQV
CREQFIKLHSQPILQDLSAYLLKRFCNPDIWSHKSSDQALLSQLQGWLKSVPQTGDFDLE
QVKHSKYFFS
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccttgtgttggacccgcggcgcgaccgggtttcgccggacgctgcggtactcc
ggccgcacccgccctgcggccctggaagggaccatgactgcccttggaggccccagaagg
agttcatctgccagcccacgtgagctagaccgcaggaaggactggggcctcgcagagctg
ctggaagtgctggaggcgcgggtgcggcagctgcaggctgagagcctgtctgaggtgacc
gtgaatcgggtggaggtggcccaggtccccacagcccaggctgtgtgggaacagaagctc
aaacgggaaaagcagaatcagcagaagcgccagcctcagatagagaagtggctgaagaaa
cagacccaaaagcaggcgtacaagctgaaacacccgggcctgctcctggagccccagttc
cagagccagcagctgatcaactgcttggacaacaagaaggttcatagcccctgggaagag
aagctggaaaaggtgctacagcaggttccacagaagctgagcgtagagacccaagcccca
ccggccatcgaggaggaggaggaggatgaaaagcaggtgtccggccggccgcagaacatg
ctgtccttcctgcagggctgcctatctgccgaccagctgcccctagcccaccacatgctg
gtcactcagcactcagcactccagcgccggaagcatccaccgctcacactcgccatgtac
aacgtggtcatgcttggctgggcccgcaagggctccttcaaggagctggtgtatgtgttc
ttcatggtgaaagacgccggcctcactccagacctgcagtcctatgcagctgccctccag
tgcatggggagggtggaccaggacgcccacaccatcaaaaggtgtgtgaagcagatggcc
cgggacgggctgcagctggagcagctcttcacagacctgtccatgtcctccgaggagcgc
gccgccatcctgcgcgctgtgctcaaggctcagcctgacttccgtgtcccacagcgccca
ccccaggtcaacacgtccacgctgctcagcgacatctatgccccggaaggactcaagctg
tacccaaagctgcactgaccctaaaaaacgatgcaggacctcttcaaggaccagctgcac
ctggaaatgcaggccaccatctctgtggagtctgtggagaagcccccaacgctgaccgag
caggtcttaaaggcgcggaagaccctgaacgccctgcgcacccagtggaaggccgcactg
ctgcgagtactgcaggagaccaagacccgcatgggctgcgaggcgcaccagggtcagccc
tcgctctaccccttcctgtcgctgctcagcgagaaggacctggtggagctgctcatgcag
actttgcagacattgccctcccagggcgagtcactcatgttcatggcccacaacctgagc
atgcacctcttcaaccggcatgctgtgcagcagaagaaactcagcaatgagttgcagcat
ctggagcggcggtacatgcagtatgtacgcctgctggcctctgatgcccaggtggacaca
ccctgcctacctcggcagcactgggaggcactgggggaaaatgacgaggcaccacagcag
tcctggcctgtgccactgatcctgaagctgggcaaacatctggtcgagatgatggtgcag
gctctggagatgccccacaacctggccaccagccagggctcccacaagctcatccccgtg
ctataccacgtctactccttccggagcttccgccagattggcattgtgaagccacacccg
gcctacacgcagctgctggccaccgctgcggagaccacactgacctttgagtcagcccac
atgcccatgctgtgccccccactgccctggacctcctcgaacacgggcgccttcctgctg
agccacaccaagctgatgcgtggcgtggacagcaacatggagcaccagcgcctgctgnat
aactgccccactgccgagctgcatggtgcgcttgactctctcactcagctggggaactgc
gcctggtgcgtcaacgggcgcctgctggacctggtgctccaggtcttccgggacaagggc
agtgtccgcctgggtgtgccgccgcccatctcggaggcgccccagccaccaaganccgtg
ctgccgccccacgtgtccctcattcagaaggccgacatccggcgggagctgctgcactgc
cagaaggtgacacgcgagatgcacagcatgcgcatggaggccctgtaccgcctctcgctg
gcccagcacctgcggggccgtatcttctggctaccccacaacatggacttccgcggccgc
acctacccctgcccacctcacttcaaccacctgggcagcgacctggcccgggccctgctg
cagttcgccgaaggccgccccctgggtccccacggccttgactggctcaagatccatctg
atcaacctcaccggcttcaagaagcgggactcgctcaagacccgcctggcctttgccaac
cagatgatggacgacattctggactctgcagaccagcccatgacgggcaggaaatggtgg
atggaggctgatgagccctggcagactctggcctgctgcatggaggtagcgcaggccgtg
cgctcccccgaccctgctgcctttgtttcccacctgcctgttcaccaggacggctcctgc
aatggtctacagcattacactgccctgggccgagacagcatcggtgccgcctccgtcaac
ctgttaccctcggacctgccacaagatgtgtacagtgaggtggctgcgcaggtggaggtg
ttccgcatgcaggacgtgaagaagggcgatcccatggcgcagctgctggagggcttcatc
agccgcaaagtcgtgaagcagacagtgatgacggtggtgtacggcgtcacccgctacggc
ggccgactccagattgagaagcgcctccgggagctgagcaacttcccccaggattacgtt
tgggaggcctcgcactacctggttcgcctggtcttcaagagcctgcaggagatgttctca
ggtacccgggccatccagcaatggctgagcgagagcgcacgcctcatcgcacaggcaggc
catgccgtggagtgggtcaccccccttggcgtccctgtcatccagccctactaccaggac
accaagtaccaggtccacggcgggattcagagcatcacctgcaccaccactgtgaacagc
aaccagaaacccaacacactgaagcagaggaatggcttcccccccaacttcatccattcg
ctggactctacccacatgatgctcacagcgctgcactgctacaggaaggggctgaccttc
gtctctgtgcacgactgcttctggacgcacgcggctgacatccccgtcatgaaccaggtg
tgccgtgagcagttcatcaaactgcacagccagcccatcctgcaggacctgtccgcctac
cttctgaagcgcttctgcaaccccgacatctggtcccacaagtcctcggatcaagccttg
ctgtcccagctgcagggctggctgaagtccgtgccccagaccggagacttcgacctggag
caggtgaagcactccaagtacttcttcagttga
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integrated database retrieval system
