Perognathus longimembris pacificus (Pacific pocket mouse): 125348542
Help
Entry
125348542 CDS
T08928
Symbol
Rnf126
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125348542 (Rnf126)
04121 Ubiquitin system [BR:
plop04121
]
125348542 (Rnf126)
Enzymes [BR:
plop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125348542 (Rnf126)
Membrane trafficking [BR:
plop04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
125348542 (Rnf126)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125348542 (Rnf126)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
Zn_ribbon_19
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-Nse
zf-RING_16
DUF8608
C1_2
HypA
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
125348542
NCBI-ProteinID:
XP_048197796
LinkDB
All DBs
Position
3:65756760..65766940
Genome browser
AA seq
353 aa
AA seq
DB search
MRTMGERARARRPAREQQTAGGGRRAPRGGRAGGAEAAGAMAEASPQPGRYFCHCCSVEI
VPRLPDYICPRCESGFIEELPEETRNTENSSAPSTAPTDQSRQPFENVDQHLFTLPQGYG
QFAFGIFDDSFEIPTFPPGAQASDSRDPESRREREHQSRHRYGARQPRARLTARRATGRH
EGVPTLEGIIQQLVNGIITPATIPNLGLGPWGVLHSNPMDYAWGANGLDAIITQLLNQFE
NTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKDDYALGENVRQLPCNHLFHDGCIVP
WLEQHDSCPVCRKSLTGQNTATNPPGLTGVSFSSSSSSSSSSSPSNENASSNS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaccatgggtgagcgtgcgcgggcgcgtcggccggcgagggagcagcaaacggcc
ggcggcgggcggcgggcgccgcgcgggggccgggcgggcggcgcggaggcggcgggggcc
atggctgaggcgtcgccgcagccgggacggtacttctgccactgctgctcggtggagatc
gtgccgcgcttgccggattacatctgcccgagatgtgagtctggttttatcgaagagctt
ccagaagaaacaaggaatacagaaaacagttccgccccctccacggcccccactgaccaa
agccggcagccattcgagaatgtggaccagcacctgttcacactgccccagggctacgga
caatttgctttcggcatctttgacgacagcttcgagatccccacgtttcctcctggggca
caggccagtgatagcagggaccccgagagccgacgggagagagaacaccagtctcggcat
cggtatggcgcccgacagccccgcgcccgtctcaccgcccggcgggccaccggccggcac
gaaggcgtccccacgctggaaggaatcatccagcagctggtcaatggcatcatcactccg
gccaccatccccaacctgggcctgggcccctggggcgtcctgcactcaaatccgatggac
tacgcctggggagccaatggtctggacgccatcatcacacagctcctcaatcagtttgag
aacaccggccccccgcctgcagacaaggagaagatccaggccctccccactgtccctgtc
actgaggagcacgtaggctctggccttgaatgtcctgtgtgcaaggatgactacgcactg
ggcgagaatgtgaggcagctgccctgcaaccacctgttccatgacggctgcattgtgccg
tggctagagcagcatgacagctgccctgtctgtcggaagagcctcacgggacagaacaca
gccaccaaccccccgggcctgacaggggtgagcttctcctcctcgtcctcctcgtcgtcc
tccagctcgcccagcaatgagaatgcctcaagcaactcctga
DBGET
integrated database retrieval system
