Perognathus longimembris pacificus (Pacific pocket mouse): 125348563
Help
Entry
125348563 CDS
T08928
Symbol
Gtf2f1
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125348563 (Gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plop03021
]
125348563 (Gtf2f1)
Transcription machinery [BR:
plop03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
125348563 (Gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
125348563
NCBI-ProteinID:
XP_048197838
LinkDB
All DBs
Position
3:66396776..66405745
Genome browser
AA seq
516 aa
AA seq
DB search
MAALVSGPGTQSVTEYVVRVPKNTTKKYNIMAFNAADKVNFATWNQARLERDLSNKKIYQ
EEEMPESGAGSEFNRKLREEARRKKYGIILKEFRPEDQPWLLRVNGKSGRKFKGIKKGGV
TENTSYYIFTQCPDGAFEAFPVHNWYNFTPLARHRTLTAEEAEEEWERRNKVLNHFSIMQ
QRRLKDQDQDEDEEEKEKRNRKKASELRIHDLEDDLEMSSDASDASGEEGSKAPKSKKKA
PLSKAGRKKKKKKGSDDEAFEDSDDGDFEGQEVDYMSDGSSSPDEEAEGKPKVTQQDEGP
KGVDEQSESSEESEEEKPPEEDKEEEEKKAPTPQEKKRRKDSSEESDSSEESDIDSEASS
ALFMAKKKTPPKRERKPSGGSSKGNSRPGTPSTEAGSTSSTLRAAASKLEQGKRSSETPA
AKRLRLDGPQSSGKSTPQPPSGKSTPSSGDVQVTEDAVRRYLTRKPMTTKDLLKKFQTKK
TGLSSEQTVNVLAQILKRLNPERKMINDKMHFSLKE
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggtgagtggccccggcacccagagcgttaccgagtacgttgtccgcgtg
cccaagaacaccacgaaaaaatataacataatggctttcaacgcagctgataaagtcaac
tttgctacatggaatcaggcccggctggagcgggacctgagcaacaagaagatttaccag
gaggaggagatgccagagtctggtgcgggcagcgagttcaaccggaagctgcgggaagaa
gcgcgccgcaagaagtatggcatcatcttgaaggagttccggcccgaggaccagccctgg
ctgctgcgcgtcaatggcaagtctggccggaagttcaagggcataaagaaaggaggcgtg
acagagaacacttcctactacatcttcacgcagtgccctgacggggccttcgaggccttc
cctgtccacaactggtacaacttcacgccgctggcccggcaccgcacgctcaccgcggag
gaggcggaggaggagtgggagaggaggaacaaggttctgaaccacttcagcatcatgcag
cagcggcggctcaaggaccaggaccaggacgaggatgaggaagagaaggagaagcgcaac
cgcaagaaggccagtgagctacgcatccatgacctggaagacgacctggagatgtcctcg
gatgccagcgatgccagtggcgaggagggcagcaaagcccccaagagcaagaagaaggcc
cccctgagcaaggcgggcaggaagaagaagaagaagaagggctcagatgatgaggccttt
gaggacagtgacgatggggactttgagggccaggaagtggactacatgtctgacggctcc
agctccccagatgaggaggctgagggcaagcccaaggtcacgcagcaggatgaaggcccc
aagggggtggatgagcagagcgagagcagtgaggagagtgaggaggagaagccgcccgag
gaggacaaggaggaggaggagaagaaggcgcccactccacaggagaagaagcgcaggaaa
gacagcagcgaggagtcagacagctcagaggagagcgacatcgacagcgaggcctcctct
gccctcttcatggcgaagaagaagacgccccccaagagagagcggaagccgtcagggggc
agctcaaagggcaacagccggccaggcacgcccagcaccgaggctggcagcacgtcgtcc
acactgcgtgcggcagccagcaagctggagcaggggaagcgcagcagcgagactccagcg
gccaagcgcctgcggcttgatgggccccagagctctgggaagtccaccccacagccgccc
tcgggcaagtccacacccagcagcggtgatgtgcaggtgacagaggacgctgtgcgccgc
tacctgacgcggaagcccatgaccacaaaggacctgctgaagaagttccagaccaagaag
acggggctgagcagcgagcagactgtgaatgtgctggcccagatcctcaaacgcctcaac
cccgagcgcaagatgatcaatgacaagatgcacttctccctgaaggaatga
DBGET
integrated database retrieval system
