Perognathus longimembris pacificus (Pacific pocket mouse): 125348602
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Entry
125348602 CDS
T08928
Name
(RefSeq) spermatid perinuclear RNA-binding protein isoform X1
KO
K13200
spermatid perinuclear RNA-binding protein
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
plop03041
]
125348602
Spliceosome [BR:
plop03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125348602
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
dsrm
SGP
Dicer_dsRBD
DUF6857
Motif
Other DBs
NCBI-GeneID:
125348602
NCBI-ProteinID:
XP_048197924
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All DBs
Position
1:complement(152754946..152854604)
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AA seq
672 aa
AA seq
DB search
MRSIRSFANDDRHVMVKHSTIYPSPEELEAVQNMVSTVECALKHVSDWLDETNKGTKTEG
ETEVKKDEAVENYSKDQSGRTLCGVMRIGLVAKGLLIKDDMDLELVLMCKDKPTETLLNT
VKDNLPIQIQKLTEEKYQVEQCVNEASIIIRNTKEPTLTLKVILTSPLIRDELEKKDGEN
VSMKDPPDLLDRQKCLNALASLRHAKWFQARANGLKSCVIVLRILRDLCNRVPTWAPLKG
WPLELICEKSIGTCNRPLGAGEALRRVMECLASGILLPGGPGLHDPCERDPTDALSYMTI
QQKEDITHSAQHALRLSAFGQIYKVLEMDPLPSSKPFQKYSWSVTDKEGAGSSAIKRPFE
DGLGDDKDPNKKMKRNLRKILDSKAIDLMNALMRLNQIRPGLQYKLLSQSGPVHAPVFTM
SVDVDGTTYEASGPSKKTAKLHVAVKVLQAMGYPTGFDADIECMSSDEKSDNESKNETVS
SNSSNNTGNSTTETSSTLEVRTQGPILTASGKNPVMELNEKRRGLKYELISETGGSHDKR
FVMEVEVDGQKFRGAGPNKKVAKASAALAALEKLFSGPNAANNKKKKIIPQAKGVVNTAV
SAAVQAVRGRGRGTLTRGAFVGATAAPGYIAPGYGTPYGYSTAAPAYGLPKRMVLLPVMK
FPTYPVPHYSFF
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgagatctattcgatcttttgccaatgatgatcgccatgttatggtgaaacattcaaca
atttacccatctccggaggaacttgaagctgttcagaatatggtgtctactgttgaatgt
gctcttaaacatgtctcagattggctggatgaaacaaataaaggcacaaaaaccgagggc
gagacagaagtgaagaaagatgaggctgtagaaaactattccaaggatcagagtggtcgg
acattgtgtggtgtaatgaggattggactggtggcaaaaggcttactgattaaggatgat
atggacttggagctagttttaatgtgcaaagacaaacccacagagaccttgctaaataca
gtcaaagataatcttcctatacagattcagaaactgacagaagagaaataccaagtggaa
caatgtgtaaatgaagcatctattataattcggaacacaaaagagccaacattaactctg
aaggtgatacttacttcccctctaattagggacgaattggagaagaaagatggagaaaat
gtttcgatgaaagatcctccggacttattggacaggcaaaaatgcctgaacgccttggcg
tctcttcgacatgccaaatggtttcaggcaagggcaaatggattaaaatcatgtgtaatt
gtcctccgaattctgcgagatttgtgcaacagagtccccacatgggcaccattgaaagga
tggccactagagcttatatgtgaaaagtctataggtacttgtaatagacctttgggcgct
ggggaggccttgagacgagtaatggagtgtttggcatctggaatactacttcctggaggt
cctggtcttcatgatccttgtgagcgagacccaacagatgctctgagctatatgaccatc
caacaaaaagaagatattacccacagtgcacagcatgcgcttagactgtcagcgtttggc
cagatttataaagtgttggagatggacccccttccctctagtaagccttttcagaagtat
tcctggtcagttactgataaagaaggtgctgggtcttcagctataaagaggccatttgaa
gatgggttaggggatgataaagatcccaataagaagatgaaacgaaacttaagaaaaatc
ctggatagtaaagcaatagaccttatgaatgcactaatgaggctaaatcagatcagacct
gggcttcagtataagctcttgtctcagtctggccctgtccacgccccagtcttcacaatg
tctgtagatgtggatggcacaacttacgaagcctcaggaccatccaagaaaacagcaaaa
cttcacgtagcagtgaaggtattacaggcaatgggatacccaacaggctttgatgcagat
attgaatgtatgagttccgatgaaaagtctgacaatgaaagcaaaaatgaaacagtgtct
tcaaactcaagcaataatactggaaattctacaactgaaacctccagtaccttagaggta
agaactcagggccctattcttacagcaagtggcaaaaatcctgtcatggagctcaatgaa
aaaagaagaggtctcaagtatgaacttatctcagaaactggtggaagccatgacaagcgc
tttgtaatggaggtagaagtagatgggcagaaattcagaggtgcaggtccaaataagaaa
gtggcaaaggcaagtgctgcattagctgccctggagaagctgttttctggccctaatgca
gcaaataataagaaaaagaagattattcctcaggcaaagggtgttgtgaatacagctgta
tctgcagcggtccaggcagttaggggcagaggaagaggaactctgacaaggggagccttt
gttggggctacggctgctcctggctatatagctccaggctatggaacaccttatggttac
agcacagctgcccctgcctatggtttgcccaagagaatggttctgttacccgttatgaaa
ttcccaacatatcctgttccccactactcattcttttag
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