Perognathus longimembris pacificus (Pacific pocket mouse): 125348904
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Entry
125348904 CDS
T08928
Symbol
Colgalt1
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00310
Lysine degradation
plop00514
Other types of O-glycan biosynthesis
plop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
125348904 (Colgalt1)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
125348904 (Colgalt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
plop01003
]
125348904 (Colgalt1)
Enzymes [BR:
plop01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
125348904 (Colgalt1)
Glycosyltransferases [BR:
plop01003
]
O-Glycan biosynthesis
O-linked Gal type
125348904 (Colgalt1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Glycos_transf_2
Motif
Other DBs
NCBI-GeneID:
125348904
NCBI-ProteinID:
XP_048198505
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Position
3:75646701..75658806
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AA seq
623 aa
AA seq
DB search
MAAAPHARGLRGQPTPGLLLLLLLASPPPGGPAGAAAYFPEERWSPESPLQAPRVLIALL
ARNSAHALPATLGALERLRHPRERMALWVATDHNADNTSAVLREWLVAVKSLYHSVEWRP
AEEPRSYPDEEGPKHWSDSRYEHVMKLRQAALKAARDMWADYILFVDADNLITNPDMLSL
LIAENKTVVAPMLDSRAAYSNFWCGMTSQGYYRRTPAYIPIRKRDRRGCFAVPMVHSTFL
IDLRKASSRSLAFYPPHPDYTWSFDDIMVFAFSCKQAEVQMYVCNKEVFGFLPVPLRAHS
TLQDEAESFLHTQLEVMVKHSPVEYSRFISAPTRTPDKMGFDEVFMINLQRRQDRRARML
RALEEQEIACRLVDAVDGKAMNTSQVEELGIQMLPGYRDPYHGRPLTKGELGCFLSHYNI
WKEVVDRGLQKSLVFEDDLRFEIFFKRRLMNLMEDVEREGLDWDLIYVGRKRMQVEHPEK
AVPRVRNLVEADYSYWTLGYALSLRGARKLLAARPLAKMLPVDEFLPVMFDKHPVSEYKA
HFSPRDLRAFSAEPLLIYPTHYTGDDGYVSDTETSVVWDNEGVKTDWDRAKSQKMREQQA
LSREAENSDVLQSPLDSAARDEL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccccgcacgcgcgcgggttgcgcggacagccgacccctgggttgctgctg
ctactgctgctggcatcgccgcctcccgggggccccgcgggcgccgccgcctacttcccg
gaggagcgctggagcccggagtcgccgctgcaggcgccccgcgtgctcatcgcgctgctg
gcgcggaactcggcccacgcgctgcccgccacgctgggcgcgctggagcggttgcggcac
ccgcgggagcgcatggcgctgtgggtggccacggaccacaacgcagacaacacgtccgcc
gtgctgcgggagtggctggtggctgtgaagagcctgtaccactccgtggagtggcggccg
gccgaggagcccaggtcctaccctgatgaggagggacccaaacactggtccgactcccgc
tatgagcatgtcatgaagttgcgccaggcagccctgaaggcagcccgggatatgtgggcc
gattacatcctgtttgtggatgcagacaacctgatcaccaaccccgacatgctgagcctg
cttattgccgagaacaagacggtggtggcacctatgctggactcccgggccgcatactcc
aacttctggtgtggcatgacctcccagggttactacaggcgcacccctgcctacatcccc
atccgcaaacgagaccggcggggctgcttcgcagtgcccatggtccactccaccttcctc
atcgacctccggaaggcctcatcccggagcttagccttctacccgccccaccctgactac
acctggtccttcgatgacatcatggtcttcgccttctcctgtaagcaggcagaggtgcag
atgtacgtgtgcaacaaggaggtgttcggcttcctgcccgtgccattgcgcgcccacagc
accctgcaggatgaggcggagagcttcctgcacacgcagctggaggtcatggtgaagcac
tcgcctgtggagtactcgcgcttcatctctgcacccaccaggactcccgacaagatgggc
ttcgatgaggtattcatgatcaacctgcagcggcgccaggaccggcgggcgcgcatgctg
cgggcgctggaagagcaggagatcgcctgccgcctggtagatgcggtggacggcaaagcc
atgaacaccagccaggtggaggagctgggcatccagatgctgcctgggtaccgcgacccc
taccacgggcggccactgaccaagggggagctgggctgcttcctcagccactacaacatc
tggaaggaggtggtggatcgggggctgcagaaatcccttgtgtttgaggatgacctgcgt
tttgagatcttctttaagaggcgtctgatgaacctcatggaggatgtggagcgggagggc
ctggactgggacctcatctacgtgggccggaagcggatgcaggtagaacaccccgagaag
gccgtgccccgcgttcggaacctggtggaggccgactactcgtactggacgctgggctac
gccctctccctgcggggcgcacgcaagctgctggccgcacggccgctggccaagatgctg
ccggtggacgagttcctgccggtcatgttcgacaagcacccggtgtccgagtacaaggcc
cacttctccccgcgcgacctgcgtgccttctcggcggagcccctgctcatctaccccacg
cactacacgggggacgacggctacgtaagcgacacagagacttcggtggtgtgggacaac
gagggcgtcaagaccgactgggaccgagccaagtcccagaagatgcgcgagcagcaggcg
ctgagccgcgaggccgagaactcggatgtgctgcagtccccgctggacagcgcggcccgc
gacgagctctga
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