Perognathus longimembris pacificus (Pacific pocket mouse): 125348940
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Entry
125348940 CDS
T08928
Symbol
Gdf1
Name
(RefSeq) embryonic growth/differentiation factor 1
KO
K05495
growth differentiation factor 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
125348940 (Gdf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125348940 (Gdf1)
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
plop04052
]
125348940 (Gdf1)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
125348940 (Gdf1)
Cytokines and neuropeptides [BR:
plop04052
]
Cytokines
Transforming growth factors (RSTK binding)
125348940 (Gdf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
Motif
Other DBs
NCBI-GeneID:
125348940
NCBI-ProteinID:
XP_048198590
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All DBs
Position
3:complement(76170312..76171713)
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AA seq
358 aa
AA seq
DB search
MPPPLHLLLVLLLLPSAPARAPASRDPAATFFRALGLRHAPRGASRLRPVPPLMWRLFRR
RDTLEARARWRWPPAVPLRPCHVEELGVAGNIVRHIPGRGAAAPRPKPEVLPAGLCPDWT
VAFDLSAVEPEEVPSRVRLELRFTVGSADLACPAEGWELSLALAGEAGPGPVLLRQAVRS
LESPVRAELLGTAWAANTSAPRSLRLALALQPRALAACAPLAEASLLLVTLDPRRCRPPA
RPRRQAQPAPAGACRARRLYVSFREVGWHRWVIAPRGFQANYCQGHCALPATLPASGGPP
ALNHAVLRALVHGATPGAGLPCCVPARLSPISVLFFDNSDNVVLRHYEDMVADDCGCR
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgccgctccacctccttttggtcctactgctgctcccgtcagcccccgcccgt
gccccagcgtcccgggaccctgccgccaccttcttccgggctctcggccttcgccatgca
ccccgcggcgcctccaggctccgacctgtgcctccgctcatgtggcgcctgttccgccgc
cgcgacaccctggaagcccgggcccggtggcggtggccccccgcggtccccctgaggcca
tgccacgtggaggagctgggggtcgctgggaacatcgtgcgccacataccgggccgtggt
gcggcggctccgcgcccaaagcccgaggtgctgcctgccgggctgtgccccgactggacc
gtggccttcgacctgtcggcggtggaaccagaagaggtccccagccgtgtccggctggag
ctgcgcttcactgtggggagcgcggacttagcgtgccccgcggaaggctgggagctgagc
ttggcgctggcaggcgaggcgggcccgggcccggtgctgctgcgccaggccgtgcgctcc
ctggagtctccggtgcgcgccgagctgctgggcaccgcctgggctgccaacacctcggcg
ccacgcagcctccgcctggccctggcgctgcagccccgggcgctcgccgcctgcgcgcct
ctggctgaggcctcactgctgctggtgaccctggacccacgccggtgccgccccccagcc
cgtccgcggcgccaggcccaaccggccccggctggcgcctgccgtgcccgccgactctac
gtgagcttccgcgaggtgggctggcaccgctgggtcatcgcgccccgaggcttccaggcc
aactactgccagggccactgcgcgctgcccgccacgctgcctgcctccggggggccgccc
gcgctcaaccacgcggtgctgcgagcgctagtgcacggggccaccccgggtgccggcctg
ccctgctgcgtgcccgcgcgcctgtcgcccatctctgtgctcttctttgacaacagcgat
aacgtggtgctgcgtcactacgaggacatggtggctgatgactgcggctgccgctga
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