Perognathus longimembris pacificus (Pacific pocket mouse): 125348996
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Entry
125348996 CDS
T08928
Symbol
Tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
plop03041
]
125348996 (Tfip11)
Spliceosome [BR:
plop03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
125348996 (Tfip11)
Other components
Complex C specific factors
125348996 (Tfip11)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
125348996
NCBI-ProteinID:
XP_048198697
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Position
3:78768115..78778630
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AA seq
837 aa
AA seq
DB search
MSLSHLYRDGEGRVDDDDDERENFEITDWDLQNEFNPNRQRHWQTKEEATYGVWAEHDSD
EERPSFGGKRARDYSAPVNFISAGLKKGAAEEAELEDSDEEEKPAKQEDFPKDFGPKKLR
TGGNFKPSQKGFAGGSKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIE
AKQRKGKGAVGAYGSERATQSLQDFPVVDSEEEAEEEFQKELSQWRKDPSGGKKKPKYSY
KTVEELKAKGRISKKLTAPQKELSQVKVIDMTGREQKVYYSYSQISHKHGVPDDGLPPAA
QPPPLPGKETKAPGFALPELEHNLQLLIELTEQEIIQSDRQLQHERDMVVNLSHELEKMS
EVLEHEERVISNLSKVLEMVEECERRLQPHCPDPLTLDECARIFQTLQDKYYEEYRMSDR
VDLAVAIVYPLMKDYFKEWDPLKDCTYGTQIISKWKSLLENDQILSHGGQDLSADAFHRL
IWEVWMPFVRNIVTQWQPRNCEPMVDFLDSWAHIIPVWVLENILDQLIFPKLQKEVDSWN
PLTDTVPIHSWIHPWLPLMQARLEPLYSPIRSKLSSALQKWHPSDASAKLILQPWKDVFT
PGSWEAFMVKNIVPKLGMCLGELVINPHQQHMDAFYWVMDWEGVISVSSLVGLLEKHFFP
KWLQVLCSWLSNSPNYEEITKWYLGWKSVFSDQVLAHPAVKDKFNEALDIMNRAVSSNVG
AYMQPGARENIAYLTHTERRKDFQYEAMQERREAENMAQRGIGVAASSVPMNFKDLIETK
AEEHNIVFMPVIGKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgtcccacttgtaccgggatggagaaggccgagtggatgatgatgatgatgaa
cgggagaactttgagatcactgactgggatctccagaatgagttcaaccccaaccggcag
cggcactggcagaccaaggaagaggccacctatggagtgtgggctgagcacgactcagat
gaagagaggcccagctttggaggcaaacgggcccgagactactctgcacccgtgaacttc
atcagcgctggactcaagaaaggggcagctgaagaggcagagttggaagattctgatgag
gaagagaagcctgccaagcaggaagacttcccgaaggattttggaccaaagaagctgaga
acgggaggcaactttaagcccagccagaagggcttcgcaggcggaagcaagtccttcatg
gactttggcagttgggaaagacatacgaaggggattgggcagaagcttctgcagaagatg
ggctatgtccctggccggggcctcgggaagaatgcccaaggcatcatcaacccgattgag
gccaagcagaggaagggaaaaggtgcagtgggagcctatggctcagagcgggctacgcag
tccctgcaagacttccctgtggtggactcagaggaggaggctgaggaggagttccagaag
gagctgagccagtggaggaaagaccccagcggaggcaagaagaagcccaagtactcttac
aagacagtggaagagctgaaggccaagggtagaatcagcaagaagctcactgccccccag
aaggagctttctcaggtcaaggtcatcgacatgacgggccgggagcagaaggtctactac
agctacagccagatcagccacaagcacggcgtgccggacgatgggctgcccccggccgcc
cagccaccgccgctgccaggcaaggagaccaaggctccgggctttgcgctgcctgagctg
gagcacaacctgcagcttctcatcgagctcacggagcaggagatcatccagagcgaccgg
cagctgcagcatgagcgggacatggtggtgaacctctcgcacgagctggagaagatgtct
gaggtgctggagcacgaggagcgcgtcatctctaacctcagcaaggtgctggagatggtg
gaggagtgcgagcggcgcctgcagcctcactgcccagaccccctcacgctcgacgagtgc
gcccgcatcttccagaccctgcaggacaagtactacgaggagtaccgcatgtcggaccgc
gtggacctggccgtggccatcgtctacccactcatgaaagactacttcaaggagtgggac
cccctcaaggactgcacctatggcacccagatcatctccaagtggaagagcctgctggag
aatgaccagatcctgtcccacggtggccaggacctctcagctgatgcttttcacaggctc
atatgggaagtttggatgccttttgttcgaaatatcgtcacccagtggcagccaaggaac
tgtgagcccatggtggacttcctggacagctgggcacacatcatccctgtgtgggtgctg
gaaaacatactggaccagctcattttccccaagctgcaaaaggaggtggacagctggaac
ccactgacagacacggtgcccatccactcgtggatccacccatggctgcccctcatgcag
gcacggctggagccactctactcgcccatccgcagcaagctgtccagtgccctgcagaag
tggcaccccagcgacgcttcagccaagctcatcctgcagccctggaaggatgtcttcacc
ccgggctcctgggaggccttcatggtgaagaacattgtgcccaagctgggcatgtgtctg
ggtgagctggttatcaacccccaccagcagcacatggacgccttctactgggtgatggat
tgggaaggtgtgatctcggtctccagcctggtgggccttctggagaagcacttcttcccc
aagtggctgcaggtgctatgctcctggctcagtaatagccccaattatgaggagattacc
aagtggtacctgggctggaagtccgtgttctcagaccaggtgctggcccacccagctgtc
aaggacaagttcaacgaagcactggacatcatgaacagggcagtgtcctccaatgtcggg
gcctacatgcagccaggagcacgggagaacatcgcgtacctcacacacacagagcgcagg
aaggacttccagtacgaggccatgcaggagcggcgggaggctgagaacatggcccagagg
ggcatcggtgtggccgccagctctgtgcctatgaacttcaaggacctcattgagaccaag
gcggaggagcacaacatcgtcttcatgcctgtcatcggcaagcggcacgagggcaagcag
ctgtacacttttggccggattgtcatctacatcgaccggggtgtggtgtttgtgcagggc
gagaagacctgggtgcccacctccctgcaaagcctcatcgacatggccaaatag
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