Perognathus longimembris pacificus (Pacific pocket mouse): 125349016
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Entry
125349016 CDS
T08928
Symbol
Ssh1
Name
(RefSeq) protein phosphatase Slingshot homolog 1
KO
K05766
protein phosphatase slingshot [EC:
3.1.3.16
3.1.3.48
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04360
Axon guidance
plop04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
125349016 (Ssh1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
125349016 (Ssh1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
plop01009
]
125349016 (Ssh1)
Enzymes [BR:
plop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
125349016 (Ssh1)
3.1.3.48 protein-tyrosine-phosphatase
125349016 (Ssh1)
Protein phosphatases and associated proteins [BR:
plop01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Dual specificity phosphatases)
Slingshots
125349016 (Ssh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_SSH1-like_1st
DSPc
DEK_C
Y_phosphatase
PTP-SAK
Motif
Other DBs
NCBI-GeneID:
125349016
NCBI-ProteinID:
XP_048198728
LinkDB
All DBs
Position
3:complement(79913673..79966234)
Genome browser
AA seq
1049 aa
AA seq
DB search
MALVTLQRSPTPSAASSSASNSELEAGSDEERKLNLSLSESFFMVKGAALFLQQGSSPQG
QRSLQHPHKHAGDLPQHLQVMINLLRCEDRIKLAVRLESAWTDRVRYMVVVYSSGRQDTE
ENILLGVDFSSKESKSCTIGMVLRLWSDTKIHLDGDGGFSVSTAGRMHIFKPVSVQAMWS
ALQVLHKACEVARRHNYFPGGVALIWATYYESCIGSEQSCINEWNAMQDLESTRPDSPAL
FVDKPTEGERTERLIKAKLRSIMMSQDLENVTSKEIRNELEKQMNCNLKEFKEFIDNEML
LILGQMDKPSLIFDHLYLGSEWNASNLEELQGSGVDYILNVTREIDNFFPGLFAYHNIRV
YDEETTDLLAHWNEAYHFINKAKRNHSKCLVHCKMGVSRSASTVIAYAMKEFGWPLEKAY
NYVKQKRSVTRPNAGFMRQLSEYEGILDASKQRHNKLWRQQTDSSLQPPVEDPTEPSGFL
PESLDDAPDTQLLCLQDATQPGLPGGRAPGGPLLPYSFRRLSDPPNGAGSLVHLEDLERD
AVLDEAAQPVEAPKQAPHPQEGSGLCDKDVKKRLEFGSPEAHSPLQQMEDMDPEESPRAG
RWGRPTAPPERSPLNRENLNNNNSKRSCPDDFEHDAMFGILNKVKPSYKPCADCMYPTAS
GAPEAFREPCEDPSAPAICTQPAFLPHITSSPVAHVSSRSQALDKPASGPADTPPFLPSA
GSKRRDGSGSGAALELSAAPELSAGLPEPSRETPKVLPKTLLLKNFHCDKSPPCTEVVKE
EMSPRRDPRAAKDLRLLFTSESERPTINSYLTQHQESIVQLQKAGLVRKHTKQLEKLKSL
PADAVVARRDSAASRLEASIPEGQELAAGQEPGPPALPGDDEPESAPPPCEGTSLKSPPP
LLSRLDHTSNFSKDFLKTICYTPTSSSMSSNLTRSSSSDSIHSVRGKPGLVKQRTQEIET
RLRLAGLTVSSPLKRSHSLAKLGSLNFSTEDLSSEADVSTIADSQDAKWSESSFLQEPQA
TPRNPATASKPSGKSAPEHLKSPSQMNKT
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggccctggtgaccctgcagcgctcgcccacgcccagcgccgcctcctcctcggccagc
aacagcgagctggaggctggcagcgatgaagagcgaaagttaaacctcagcttaagcgag
agctttttcatggtgaaaggagctgcgctcttcctccagcagggaagcagtcctcagggc
cagcggagtctccagcaccctcacaagcatgcaggggacctgccacagcacctgcaagtg
atgattaacctcctgcgctgtgaggacagaatcaagctggctgtgcgcttggagagcgcc
tggactgaccgcgtccgctacatggtggtggtgtacagcagtgggcgccaggacaccgag
gagaatatcctgctgggtgtcgacttctccagtaaggagagtaagagttgcaccatcggg
atggttctccggctgtggagtgacacaaagatccaccttgatggagacggtggattcagt
gtgagcactgcaggaaggatgcacatatttaagcctgtatctgtccaggccatgtggtct
gcactgcaggtgctgcacaaggcctgcgaagtggcacggaggcacaactacttccctggg
ggtgtagcactcatctgggccacctactatgagagctgcattggctctgagcagagctgc
atcaatgaatggaacgccatgcaggacctagagtccacacggccggactccccagccctg
tttgtggacaagccaacagaaggggaaagaaccgagcgtctcatcaaagccaaacttcgg
agcatcatgatgagccaggatcttgaaaacgtgacctccaaagagatccgtaatgagttg
gaaaaacagatgaactgtaacttgaaagaattcaaggaattcatagacaatgagatgcta
cttatcttgggacagatggacaagccttcccttatctttgaccatctttatcttggttct
gaatggaatgcatccaatctggaggagctgcagggctcaggggttgactatattttaaat
gtcactagagaaatagacaattttttccccggcttatttgcataccacaacatccgagtg
tacgatgaggagaccacagacctgcttgcccactggaacgaggcataccacttcataaac
aaagccaagaggaaccactccaagtgcctggtccattgcaaaatgggtgtcagccgatct
gcgtccacagtcatcgcctatgccatgaaggaattcggctggcccctggagaaagcgtat
aactatgtgaagcagaagcgcagcgtcacccggcccaacgccggctttatgaggcagctg
tctgagtatgaaggcatcttggacgccagcaaacagcggcacaataagctgtggcgccag
cagacggacagcagcctccagccgcctgtggaagaccctacggagcccagcggcttcttg
cctgagagcctggatgacgccccagacacccagctgctctgcttacaagatgccacacag
cccgggctcccaggaggtcgtgccccaggagggccccttctcccctactctttccggaga
ctctctgacccccccaatggcgcaggtagcttggtccacctggaagatcttgagagggat
gctgtattggacgaggcagcccagccagtggaggcacccaagcaggccccacatccccag
gaaggctctgggctctgtgataaggatgtgaaaaagagactggagtttgggagccctgaa
gcccacagccccttgcagcagatggaggacatggacccggaggagagccccagggcaggg
agatgggggcggcccactgccccacctgagaggagcccactcaaccgggaaaacctaaat
aacaacaacagcaagaggagctgtcctgatgacttcgagcatgatgctatgtttgggatc
cttaacaaagtgaaaccttcctacaaaccctgtgcggactgcatgtaccctacagccagc
ggggctcctgaggccttccgagagccatgcgaggaccccagcgcccccgccatctgcacc
cagccagctttcctgccccacatcacatcatcccctgtggcccatgtgtccagcaggtct
caagccctggacaagccagcttctggaccagccgacactcccccattcctaccatcagca
ggctccaagaggcgtgacggtagtggctctggggctgccctagagctgtcggctgcccca
gagctgtcagctggccttccagaaccttctagagaaaccccaaaagtccttcccaagacc
ctccttttgaagaattttcactgtgataagagccctccctgcacagaggttgtcaaggaa
gagatgtcccccaggagagacccgagagcagctaaggacctgaggctcctgttcaccagc
gagtctgagagacccacaatcaacagctacctgacgcagcaccaggagtccattgtccag
ctgcagaaggcaggcctggtccgcaagcacaccaagcagcttgagaagctcaagagcctg
ccggcagatgctgtggtggcccgcagggacagtgcagccagcaggctggaggccagcatc
cctgagggccaggagctggcagccgggcaagagccaggaccccctgctctgcctggagat
gacgaaccagagtctgctccaccgccatgcgaaggaacctcgctcaagagcccccctccc
ctcctctcccgcctggaccacaccagtaacttctcgaaagacttcctaaagaccatctgc
tacacccctacctcctcctccatgagctccaacttgacccggagctcgagcagcgacagc
atccacagtgtccgtgggaagcccgggctggtaaaacagcggacgcaggagatcgagacc
cggctacggctggcaggcctgactgtctcatccccgctgaaacgctcccactctcttgcc
aagcttggaagcctcaacttctccacagaagacctgtccagcgaggctgatgtgtccacc
atcgccgactcccaggatgccaagtggagcgagtcttccttcctccaggaaccccaggcc
acgccgaggaacccagccacggcctctaaaccatcagggaaatctgccccagaacacttg
aaaagcccctcgcagatgaacaaaacctga
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