Perognathus longimembris pacificus (Pacific pocket mouse): 125349022
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Entry
125349022 CDS
T08928
Symbol
Ung
Name
(RefSeq) uracil-DNA glycosylase isoform X1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03410
Base excision repair
plop05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125349022 (Ung)
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
125349022 (Ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plop03400
]
125349022 (Ung)
Enzymes [BR:
plop01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
125349022 (Ung)
DNA repair and recombination proteins [BR:
plop03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
125349022 (Ung)
Prokaryotic type
125349022 (Ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-GeneID:
125349022
NCBI-ProteinID:
XP_048198739
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All DBs
Position
3:80076954..80087406
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AA seq
318 aa
AA seq
DB search
MIGQKTLYSFFSPSPSRKRPACSPEPAAPGTGVAAAAGESGEEAVRPDEASPAKKIRAGQ
DEPGTPPSSPLSPEQLGRIQRNKAAALLRLAARNVPVGFGESWKQHLSGEFGKPYFIKLM
GFVAEERKHYTVYPPPHQVFTWTQMCDMRDVKVVILGQDPYHGPNQAHGLCFSVQRPVPP
PPSLENIYKELSTDIDGFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFT
DAVVSWLNQNLSGLVFLLWGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGFFGCRHFSK
ANELLKKSGKKPINWKEL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgatcggccagaagaccctctactccttcttctccccgagcccttcccggaagcgacct
gcctgcagccccgagccagccgccccggggaccggcgtggcggccgcagctggggagagc
ggcgaggaggcggtgagaccggacgaggccagccctgccaagaagatccgagcgggccag
gatgagccgggcacgccgccctcttcgcccctgagccccgagcagctgggccgcatccag
agaaacaaggccgcggccctgctccgactcgcggcccgcaacgtgccggtgggcttcggg
gagagctggaagcaacatcttagcggggagttcgggaaaccctacttcataaagctaatg
ggatttgttgcagaagaaagaaaacattacactgtttatcctcccccacaccaagtcttc
acatggacccaaatgtgtgacatgagagatgtaaaggttgtcatcctgggacaggatccc
tatcatggaccaaaccaagctcacgggctctgctttagtgtccaaaggcctgttccccct
ccacccagtttggaaaacatttacaaagagctgtctacagacatagatggctttgtgcat
cccggccatggagatttatctggatgggccaaacaaggtgtcctcctcctcaatgccgtc
ctcaccgtccgggcccatcaagccaactcccataaggagagaggttgggagcagttcact
gatgcagttgtgtcctggctcaatcagaacctgagtggccttgtcttcttgctctggggc
tcttatgctcagaagaaaggcagtgccattgaccggaagcgacaccacgtcctgcagacc
gctcacccctccccactctccgtgtaccgagggttctttggttgtagacatttttccaaa
gccaatgagttgctgaagaagtctggcaagaagcccatcaactggaaggagctgtga
DBGET
integrated database retrieval system
