Perognathus longimembris pacificus (Pacific pocket mouse): 125349028
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Entry
125349028 CDS
T08928
Symbol
Ube3b
Name
(RefSeq) ubiquitin-protein ligase E3B
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125349028 (Ube3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125349028 (Ube3b)
Enzymes [BR:
plop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
125349028 (Ube3b)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
HECT type E3
125349028 (Ube3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
DUF7462
Motif
Other DBs
NCBI-GeneID:
125349028
NCBI-ProteinID:
XP_048198748
LinkDB
All DBs
Position
3:80305071..80345746
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AA seq
1068 aa
AA seq
DB search
MFTVSQTSRAWFIDRARQAREERLVQKERERAAVEIQAHVRSFLSRSRLHKDIRREIDEF
FKADDSGSSKRSALCIFKTARKLLFIFRIKEDNERFEKLCRCILSSMDAESEPKVWYVSL
ALSKDLTLLWIKHIKDVLWYCCQYLEQLKPEILQDSKLITLYLTMLVTFTDTSTWKILRG
KGESLRPAMNHICANIMGHLNQRGFYSVLQVLLTRGLARPRPCLSRATLTAVFSLALRPV
TAAQFSDNLLRPFLIHIMSVPALVTHLGTVTPERLAVLESHDMLRKFIMFLRDEERCRDV
CETLEGCHTLCLTGNLLQLGSLNPRVLEEETDGFVSLLTQMLCYCQKYVSQKKSNLTHWH
PVLGWFSQSVDYGLNESMYLVTKQLQFLWGVPLIRIFFSDILSRKLLEHPEPAPVQPASP
QNVLPMKSLLKRAFQKSASVRNILRPVGGRRVDSAEVQRVCSICVLYQTSLATLTQIRLQ
ILTGLTYLDDLLPKLWAFICELGPHGGLKLFLECLNNDTRESKQLLAMLMLFCDCSRHLI
TILDDIEVYEEQISFKLEELVTISSFLNSFVFKMIWDGIVENAKGETLELFQSVHGWLMV
LYERDCRRRFAPEDHWLRKDLKPSVLFQELDKDRKRAQLILQHIPHVIPHKNRVLLFRNM
VTKEKEKLGLVETSSASPHVTHITIRRSRMLEDGYEQLRQLSQHGMKGVIRVKFVNDLGV
DEAGIDQDGVFKEFLEEIIKRVFDPALNLFKTTSGDERLYPSPTSYIHENYLQLFEFVGK
MLGKAVYEGIVVDVPFASFFLSQLLGHHHSIFYSSVDELPSLDSEFYKNLTSIKRYDGDV
ADLGLTLSYDEDVMGQLVCHELTPGGKTIPVTNENKISYIHLMAHFRMHTQIKNQTAALI
SGFRSIIKPEWIRMFSTPELQRLISGDNAEIDLEDLKKHTVYYGGFHGSHRVIIWLWDIL
ASDFTPDERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFT
IRKREPGGRLPTSSTCFNLLKLPNYSKKSALRDKLRYAISMNTGFELS
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgttcacagtatctcagacctcacgagcgtggttcatcgatcgagcccggcaggcccga
gaagaacggctggtgcagaaggagcgggagcgtgcagctgtggagattcaggcccatgtg
cgcagtttcctgagtcggagtcgcctgcacaaagatatcagaagagagattgatgagttt
tttaaagcagatgactctggatccagtaaaagaagtgcactttgtatttttaagactgcc
agaaaactgctgttcatattcagaatcaaagaagataatgagcggttcgagaagttgtgt
cgctgcatcctcagcagcatggatgctgagagcgagcccaaggtgtggtacgtgtccctg
gctctctccaaggacctcactctcctgtggattaaacacatcaaggatgttctgtggtac
tgctgtcagtatcttgagcagctcaagcctgaaatcttacaagactccaaactcatcact
ctgtacctcacgatgcttgtcaccttcacagacacttcaacatggaaaattctccgtggc
aaaggtgagagccttcgaccagccatgaaccacatttgtgcaaatataatggggcatctg
aaccagcgtggattttattctgtgctgcaggtgttgttgacccggggcctggccaggccc
cggccttgtctgtccagagccactttaacggcagtcttttctctagcattgcgccctgtg
actgctgcacaattttcagacaatcttctccggcccttcctcatccacatcatgtcagtg
cctgcccttgtgactcatcttggcacagtgaccccagagcgcctcgctgtcttagaatct
catgacatgctgcggaaattcatcatgttcttaagagatgaagagcgatgccgtgatgtg
tgtgagactttagaagggtgccacacgctctgtctgacaggcaacctcctacagttgggc
tccctcaaccccagagtgctagaggaggagacagatgggtttgtgagcctgctcacccag
atgctgtgctactgccagaagtacgtgtcccagaagaaatccaacctgacccactggcat
ccagtcctcggctggttttcccagtctgtggactatggcctcaacgagtccatgtacttg
gtcaccaagcagctgcagttcctgtggggggtgcctctcatccgcatcttcttcagtgac
atcctcagcaggaagctgctggagcacccagagcctgcccccgtgcagccggcatccccc
cagaacgtgctccccatgaagagtcttctcaagcgtgcattccagaagtctgcatcagtt
cggaatattctgaggcctgtggggggcagacgcgtggactcggcggaggtgcagagagtg
tgcagcatctgtgtcctctaccagacctcgctggccacgctcacccagatccgcctgcag
atcctcacaggtctcacttaccttgatgacctgctgcccaaactgtgggcctttatctgt
gagctggggccccatggagggttaaagctcttcttggaatgcctgaacaacgacaccaga
gagtccaagcagctcttggccatgctgatgctgttctgtgactgttcccgacacctcatc
acgattcttgatgacattgaagtttatgaagaacaaatttcattcaaactggaagagctg
gtcaccatctcctcttttctgaattcctttgtgtttaagatgatctgggatggaatcgta
gagaatgccaagggtgagaccttggagctgttccagtctgtccatgggtggctgatggtg
ctgtatgagcgggactgccggcggcgctttgcccctgaagaccactggctgcgaaaggat
ctcaagcccagtgtgctctttcaggaactcgacaaggaccggaaacgcgcacagctgatt
ctacagcacatccctcatgtcattccacacaaaaatagagttctcctgttccgaaacatg
gttaccaaggagaaggagaaactgggacttgtggaaacgagctctgcctcccctcacgtc
actcacatcaccatccgaaggtcccggatgttggaggacggctatgagcagcttcggcag
ctctcccagcatggcatgaagggcgtgatccgcgtcaagtttgtcaatgaccttggtgtg
gacgaggctggaattgaccaggatggcgtttttaaggagttcttggaagaaatcatcaag
agggtgttcgacccagccctcaacctgttcaagacaaccagtggggatgagcggctgtac
ccctcccccacatcctacatccacgagaattacctgcagctcttcgagttcgtggggaag
atgctggggaaggctgtgtacgaggggattgtggtggatgtgcccttcgcttccttcttc
ctgagccagctgctcggccaccaccacagcatcttctacagctccgtggacgaacttcct
tcccttgactcggagttctataaaaacctcacctccattaagcgctatgatggggacgtg
gcagacctcggcctcaccctgtcctacgacgaggacgtcatgggtcagcttgtctgccat
gaactgactcctggagggaagaccattcctgttacaaatgaaaacaaaattagctacatc
catctgatggcacattttcgaatgcacacccaaatcaaaaaccaaacggccgccctcatc
agcgggttccgttccatcatcaagccagagtggatccgaatgttctcgaccccggagctg
cagcggctcatctctggagacaacgccgagattgatctagaagacttgaagaagcacaca
gtgtactatggtggctttcacggaagtcacagggtcatcatctggctctgggatattcta
gcctccgacttcacgcccgatgagagagccatgtttctgaagtttgtgaccagctgctcc
aggcccccactcctgggattcgcctacctcaagcccccattctccattcgctgtgtggag
gtgtcggacgatcaggacacgggagacaccctgggcagcgtcctccggggcttcttcacc
atccgaaagcgagagccaggcggccggctacccacctcctccacttgcttcaacctgctc
aaactgcccaactacagcaagaagagcgcccttcgtgacaagctgcgctacgccatcagc
atgaacacgggtttcgagctgtcctag
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