Perognathus longimembris pacificus (Pacific pocket mouse): 125349178
Help
Entry
125349178 CDS
T08928
Symbol
Hip1r
Name
(RefSeq) huntingtin-interacting protein 1-related protein
KO
K20040
huntingtin-interacting protein 1-related protein
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125349178 (Hip1r)
Membrane trafficking [BR:
plop04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
125349178 (Hip1r)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANTH
I_LWEQ
HIP1_clath_bdg
Nup54_57_C
Motif
Other DBs
NCBI-GeneID:
125349178
NCBI-ProteinID:
XP_048198998
LinkDB
All DBs
Position
3:87326956..87358744
Genome browser
AA seq
1063 aa
AA seq
DB search
MNSIKNVPARVLSRRPGHSLEAEREQFDKTQAISISKAINSQEVPVKEKHARRIILGTHH
ERGAFTFWSYAIGLPLPSSSILSWKFCHVLHKVLRDGHPNVLHDCQRYRSNVREIGDLWG
HLHDRYGQLVNVYTKLLLTKISFHLKHPQFPAGLEVTDDVLEKAAGTDVNNIFQLTVEMF
DYMDCELKLSESVFRQLNTAIAVSQMSSGQCRLAPLIQVIQDCSHLYHYTVKLMFKLHSC
LPADTLQGHRDRFHEQFHSLRNFFRRASDMLYFKRLIQIPRLPEGPPNFLRASALAEHIK
PVVVIPEEAPEDEEPENLIEISTAPPAGEPPVVADLFDQTFGPPNGSLKDDRDVQIETLK
KEVEALRAELEKIKLEAQRYIAQLKGQVNALEAELEEQRKQKQKALVDNEQLRHELAQLR
TAQLDGARNQGLREEAERKASATEARYSKLKEKHSELINTHAELLRKNADTAKQLTVTQQ
SQEEVARVKEQLAFQMEQVKRESEMKLEEQSDQLEKLKRELEAKAGELAHAQEALSRTEQ
SGSQLSSQLDALSAEKETLSGAVRQQEAELLAARGLVREREEALSREQQRSAQERSELQG
RLAEKESQEQGLQQKLLDQQFAVLRGAATEAQAILQDAVSKLDDPLHLRCTSSPDYLVSR
AQAALDAVGALEQGHAQYLTSMADASALVAAVTRFSHLAADTIVNGSATSHLAPTDPADR
LVDNCRECGAQALAFLTQLQDRGTLLAAQPGLLRGPLQGILQLGQDLKPKSLDVRQEELG
AMVDKEMAATSAAIEDAVRRIEDMMNQARHESSGVKLEVNERILNSCTDLMKAIRLLVMT
STSLQKEIVESGRGAATQQEFYAKNSRWTEGLISASKAVGWGASQLVESADKVVLHTGKY
EELIVCSHEIAASTAQLVAASKVKADKHSSHLSRLQECSRMVNERAANVVASTKSGQEQI
EDRDTMDFSGMSLIKLKKQEMETQVRVLELEKTLEAERVRLGELRKQHYVLAGGMAVPSE
EEPSRPSAVPRKKPPLAQKPSVAPKQDHQLDKKDGICPAQPVN
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcatcaagaacgtgccggcgcgggtgctgagccgccggccgggccacagcctc
gaggccgagcgcgagcagttcgacaagacccaggctatcagcatcagcaaagccatcaac
agccaggaggtccccgtgaaggagaagcatgcccgccgcatcatcctgggcactcaccat
gagaggggggccttcaccttctggtcctacgccatcggcctgccgctgcccagcagctcc
atccttagctggaagttctgccacgtcctccacaaggtcctccgagatgggcaccccaat
gtgctgcatgactgtcagcgatatcggagcaatgtccgggagattggtgacctgtgggga
cacctgcatgaccgctatggccagctggtgaacgtctataccaagctgctgttgaccaaa
atctccttccacctcaagcacccgcagtttcctgctggtctggaggtgaccgatgatgtg
ctggagaaggcggctgggactgacgtcaacaacatcttccagctcaccgtggagatgttt
gactacatggactgcgagctgaagctctcagaatcagtgttccggcagctcaacacagcc
atcgcggtgtcccagatgtcctcaggccagtgccgcctggccccgctcatccaggtcatc
caggactgcagccacctctaccactacaccgtcaagctcatgttcaagctgcactcgtgt
ctccctgcagataccctgcaaggccacagggaccggttccatgagcagttccacagcctc
cggaacttcttccgacgagcctcagacatgctctacttcaagcggctcatccagattccc
cggctgccagagggcccccccaacttcctgagggcctcagcccttgctgagcacatcaag
ccagtggtggtgatccctgaagaggcccccgaggatgaagagcctgagaacctcatcgag
atcagcactgcaccccctgctggggagcccccagtggtggctgacctctttgatcagaca
tttggaccccccaatggctccctgaaggatgacagggacgtgcagattgagaccttgaag
aaggaggtggaggcgctccgtgctgagctggaaaagatcaagctggaggcccagcgctac
atcgcgcagctgaagggccaggtgaacgccctggaggccgagctggaggagcagcggaaa
cagaagcagaaggccctggtggacaacgagcagctccgccacgagctggcccagctgagg
accgcgcagctggatggcgccaggaaccagggcctgcgcgaggaggccgagcggaaggcc
agcgccacggaggcgcgctacagcaagctgaaggagaagcacagcgagctcatcaacacg
cacgcggagctgctgaggaagaacgcagacaccgccaagcagctgacggtgacccagcag
agccaggaggaggtggcgcgggtaaaggagcagctggccttccagatggagcaggtgaaa
cgcgagtctgaaatgaagctggaggagcagagcgaccagctggagaagctcaagcgggag
ctggaggccaaggctggcgagctggcgcatgcgcaggaagccctgagccgcacggagcag
agtgggtcgcagctgagctcgcagctggacgcgctgagcgccgagaaggagacactgagc
ggggcggtacggcagcaggaggccgagctgctggcggcgcggggcctggtgcgcgagcgg
gaggaggcgctgagccgcgagcagcagcgcagcgcgcaggagaggagcgagctgcaggga
aggctggcagagaaggagtcacaggagcaggggctgcagcagaagcttctggaccagcag
ttcgcggtgctgcggggcgctgccactgaggcccaggccatcctgcaggacgccgtgagc
aagctggatgatcccctgcacctccgctgtaccagctcccccgactacctggtgagcagg
gcccaggcagctctggatgctgtaggtgctttggagcagggccatgcccagtacctgacc
tccatggcagatgcctccgccctggtggcagccgtgactcgcttttcccatctggctgca
gacaccattgtcaatggcagtgccacctctcacctcgcccccaccgaccctgccgaccgc
ctggtggacaactgcagggagtgtggagcccaggctctggcgttcctcacacagctgcag
gaccggggcacgctgctggcggcacagcccggcctgctgcgaggccccttgcagggcatc
ctccagctgggccaggacctgaagcccaagagtctagacgtgcggcaagaggaactaggg
gccatggttgacaaggagatggcagccacgtccgcggccatcgaggacgctgtgcggagg
attgaggacatgatgaaccaggcccgccacgagagctcgggagtgaagctggaggtgaat
gagaggatcctcaactcctgcacagacctgatgaaggcaattcggctcctggtgatgaca
tccacaagcctgcagaaagagatcgtggagagcggccggggggcggccacgcagcaggaa
ttttacgccaagaactcccggtggactgaaggcctcatctccgcctccaaggcagtgggc
tggggagcctcgcagctggtggagtcagctgacaaggtggtgctgcacacgggcaagtat
gaggagctgatcgtgtgctcccatgagatcgcagccagcacagcccagctggtggcagct
tccaaggtaaaggcagacaagcacagctcccacctgagccgcctgcaagagtgctcccgc
atggtcaacgagagagccgccaacgtggttgcctctaccaagtcaggccaagaacagatc
gaggatagagacaccatggacttctccgggatgtccctcatcaagctgaagaagcaggag
atggagacccaggtgcgcgtgctggagctggagaagacgctggaggcggagcgtgtgcgc
ctcggggagctgcggaagcagcactatgtgctggccggaggaatggcggtacccagcgag
gaggagcccagccggcccagtgctgtgccccggaagaagccacctctggctcagaagccc
agtgtggcccccaaacaggaccaccagctggacaaaaaggatggcatctgcccagctcag
cctgtgaactag
DBGET
integrated database retrieval system
