Perognathus longimembris pacificus (Pacific pocket mouse): 125349186
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Entry
125349186 CDS
T08928
Symbol
Abcb9
Name
(RefSeq) ABC-type oligopeptide transporter ABCB9 isoform X1
KO
K05656
ATP-binding cassette, subfamily B (MDR/TAP), member 9
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop02010
ABC transporters
plop04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125349186 (Abcb9)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
125349186 (Abcb9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125349186 (Abcb9)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plop02000
]
125349186 (Abcb9)
Membrane trafficking [BR:
plop04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
125349186 (Abcb9)
Transporters [BR:
plop02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
125349186 (Abcb9)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
RsgA_GTPase
AAA_30
MCU
nSTAND1
AAA_29
DUF4191
SbcC_Walker_B
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
125349186
NCBI-ProteinID:
XP_048199024
LinkDB
All DBs
Position
3:complement(87392273..87421328)
Genome browser
AA seq
766 aa
AA seq
DB search
MRLWKAVVVTLAFMSMDVGVTTAIYAFSHLDRSLLEDIRHFNIFDSVLDLWAACLYRSCL
LLGATIGVAKNSALGPRRLRASWIVITLVCLFVGIYAMVKLLLFSEVRRPIRDPWFWALF
VWTYVSLAASLLLWWLLSTVKPDAETLEPGVGAEADGFSGEGRPPTEQASGATLQKLLSY
TKPDVAFLVAASFFLIMAALGETFLPYYTGRAIDSIVIQKSMDQFSTAVIVVCLLAIGSS
FAAGIRGGIFTLIFARLNIRLRNCLFRSLVSQETSFFDENRTGDLISRLTSDTTMVSDLV
SQNINVFLRNTVKVTGVVVFMFSLSWQLSLVTFMGFPIIMMVSNIYGKYYKRLSKEVQSA
LARASNTAEETISAMKTVRSFANEEEEAEVYLRKLQQVYKLNRKEAAAYMSYVWGSGLTL
LVVQVSILYYGGHLVISGQMTSGNLIAFIIYEFVLGDCMESVGSVYSGLMQGVGAAEKVF
EFIDRQPTMVHDGNLAPDHLEGRVDFENVTFTYRTRPHTQVLQNVSFSLSPGKVTALVGP
SGSGKSSCVNILENFYPVQGGQVLLDGRPISAYDHKYLHRVISLVSQEPVLFARSITDNI
SYGLPTVPFEMVVEAAQKANAHSFIMELQDGYSTETGEKGAQLSGGQKQRVAMARALVRN
PPVLILDEATSALDAESEYLIQQAIHGNLQKHTVLIIAHRLSTVERAHLIVVLDKGRVVQ
QGTHQQLLAQGGLYAKLVQRQMLGLEPPSDYTASHKEPPSNDSHKA
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtggaaggcggtagtagtgaccctggccttcatgagcatggatgttggtgtg
accacggccatctatgccttcagccacctcgaccgcagcctgctggaggacatccgccac
ttcaacatcttcgactcggtgctggacctctgggctgcctgcctgtaccgcagctgcctg
ctgctgggggccaccattggtgtggccaagaatagcgccctggggccccgtcgattgcgg
gcctcgtggattgtcatcaccctcgtgtgcctctttgtgggcatctatgccatggtcaag
ctgttgctcttctccgaggtccgcaggcccatccgggacccatggttctgggccctcttt
gtgtggacctacgtctcccttgctgcctccctcctgctctggtggctgctgtccactgtg
aagccggatgccgagaccttggagcccggtgtgggggccgaggctgacggtttctccggg
gaaggccgcccacccactgagcaagcatctggtgccacgctgcagaagctgctctcctac
accaagcctgacgtggccttcctcgtggccgcctccttcttcctcatcatggcggctctg
ggtgagaccttcctgccgtactacacaggcagagccattgacagcatcgtcatccagaag
agcatggaccagtttagcacagcggtcatcgtggtgtgtctgctggccatcggcagctca
tttgccgcaggtattcggggcggcatttttaccctcatatttgccagactgaacattcgc
ctccgaaactgtctcttccgttcgctggtatctcaggagacaagcttctttgacgagaac
cgcacaggggacctcatctcccgcctcacctcggacaccaccatggtcagcgacctggtc
tcccagaacatcaacgtcttcctgaggaacacggtcaaggtcacaggcgtggtggtcttc
atgttcagcctctcatggcagctctccttggtcactttcatgggattccccataatcatg
atggtgtccaacatctatggaaagtactacaagagactctccaaagaggtccagagtgcc
ctggccagagccagcaacacggccgaggagaccatcagtgccatgaagactgtccggagc
tttgccaacgaagaggaggaggcagaggtgtacctgcgcaagctgcagcaggtgtacaag
ctgaacaggaaggaggcagctgcctacatgtcctatgtctggggcagtgggctcacactg
ctggtggtccaggtcagcatcctctactacgggggccacctcgtcatctcgggccagatg
accagcggcaacctcatcgccttcatcatctatgagtttgtgctgggggactgcatggag
tctgtgggctccgtttacagcggcctgatgcagggtgtgggggccgctgagaaggtgttc
gagttcatcgacaggcagccgaccatggtgcacgatgggaacttggcccctgaccacctg
gagggccgggtggactttgagaatgtgaccttcacctaccgcacaaggccccacacccag
gtcctgcagaatgtctccttcagcctttcccccggcaaggtgaccgccctggtggggccc
tcgggcagtgggaagagttcctgcgtcaacatcctagagaacttctacccggtccagggt
ggccaggtgctgctggacggcaggcccatcagtgcctatgaccacaagtacctgcaccga
gtgatctccctagtaagccaggaacctgtgctgttcgcccgctccatcaccgacaacatc
tcctatgggctgcccactgtgccctttgagatggtggtggaggctgcccagaaggccaat
gcccatagcttcatcatggagctccaggatggctacagcacagagactggagagaaaggc
gcccagctgtccggtggccagaaacagcgggtggccatggcccgggccctggtgcggaat
ccccctgtcctcatcctagatgaagccaccagtgctctggatgcagagagcgagtacctg
atccagcaggccatccacggcaacctacagaagcacacagtgctcatcattgcgcaccgg
ctgagcaccgtggagcgggcgcacctcattgtggtgctggacaagggccgtgtggtccag
cagggcacgcaccagcagttgctggcccagggcggcctctatgccaagctggtacagcgc
cagatgctggggcttgagcccccttcggactacacggctagccacaaggagccgcccagc
aatgacagtcacaaggcctga
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