Perognathus longimembris pacificus (Pacific pocket mouse): 125349193
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Entry
125349193 CDS
T08928
Symbol
Sbno1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plop03036
]
125349193 (Sbno1)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125349193 (Sbno1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
125349193
NCBI-ProteinID:
XP_048199049
LinkDB
All DBs
Position
3:complement(87620619..87686698)
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AA seq
1392 aa
AA seq
DB search
MVEPGQDLLLAALSESGISPNDLFDIDGGDAGIATPTPTVPVQQSVPFSPLELGLETEAA
VPVKQEPETVPTPALLNVRQQPPSTTTFVLNQINQLPALGSTIVMTKTPPVTTNRQTITL
TKFIQTTANTRPSISAPVVRNAMTSAPSKDQVQLKDLLKNNSLNELMKLKPPANIAQPVA
TAATDVSNGAVKKESSNKEVARIWINDMKMRSFSPTMKVPVKEDDEPEEEDEEEMGHAET
YAEYMPIKLKIGLRHPDAVVETSSLSSVTPPDVWYKTSISEETIDNGWLSALQLEAITYA
AQQHETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLSRKRALWFSVSNDLKYDAER
DLRDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQL
LHWCGDDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKARVVYASATGASE
PRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFTGV
TFKIEEVLLSQSYVKMYNKAVKLWVIARERFQQAADLMDAEQRMKKSMWGQFWSAHQRFF
KYLCIASKVKRVVQLAREEIKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKGVL
QSLIEKHFPAPDRKKLYSLLGIDLSAPSNNSSPRDSPCKENKIKKRKGEEITREAKKARK
VGGLAGSSSDDSGSDSDASDNEESDYESSKNMSSGDDDDFNPFRDESSEDDEDDPWLIRK
DHKKSKDKKKKKSIDPDSIQSALLASGLGSKRPSFSSTPVISAAPNSAPANSNTNSTNSL
ITSQDAVERAQQMKKDLLDKLEKLAEDLPPNTLDELIDELGGPENVAEMTGRKGRVVSND
DGSISYESRSELDVPVEILNITEKQRFMDGDKNIAIISEAASSGISLQADRRAKNQRRRV
HMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLESLGALTH
GDRRATESRDLSRFNFDNKYGRNALEIVMKSIVNLDSPMVSPPPDYPGEFFKDVRQGLIG
VGLINVEDRSGILTLDKDYNNIGKFLNRILGMEVHQQNALFQYFADTLTAVVQNAKKNGR
YDMGILDLGSGDEKVRKSDVKKFLTPGYSTSGHVELYTISVERGMSWEEATRIWADLTGP
DDGFYLSLQIRNNKKTAILVKEVNPKKKLFLVYRPNTGKQLKLEIFSDLRKKYKKVVSED
ALVHWLDQYNSSADTCTHAYWRGNCKKASLGLVCEIGLRCRTYYVLCGSVLSVWTKVEGV
LASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVSPLVNLLSTSDQSQQLAVQQKQLWQQ
HHPQSIANLSNA
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccagggcaagatttactgcttgctgctttgagtgagagtgggataagtccg
aatgacctctttgatatcgatggtggagatgcagggattgcaactccaacacctaccgtg
ccagtgcagcagtcggtgccatttagtccattagagctaggtttggagacagaagcagca
gttcctgttaaacaagagccagagactgtacctactcccgcactgttaaatgtgaggcag
cagcctccatctactacgacgtttgtgctgaatcagataaatcagcttccagccttagga
tctacaattgtaatgactaaaacaccacctgtaacaaccaataggcaaaccatcacttta
acaaagtttatccagactactgcaaacacacgcccttcaatctcagcaccagtagtccga
aatgccatgacctctgcaccttcaaaagaccaggttcaactgaaggatctattaaaaaat
aatagtcttaatgaactaatgaaattgaaaccacctgctaatattgctcagccagttgca
acagcagctactgatgtaagcaatggtgcagtaaagaaagaatcttccaataaagaagta
gcaagaatatggataaatgacatgaaaatgaggagtttttccccaacaatgaaagttcct
gttaaagaagatgatgagccagaggaagaagatgaagaagaaatgggtcatgcagaaacc
tatgcagagtacatgccaataaaattaaaaattggcctgcgtcacccagatgctgtagtg
gaaactagctctttatccagtgtcactcctcctgatgtttggtacaaaacatctatttct
gaagaaaccattgataatggctggctgtctgcattacagcttgaggcaattacatatgca
gcccagcaacatgaaacattcctgcccaatggagatcgtgctggtttcttaataggtgat
ggtgctggtgtagggaaaggcaggacgatagcaggaatcatctatgaaaattacttgttg
agtaggaaaagagccctgtggtttagtgtttcgaatgacttaaaatatgatgctgaaaga
gatttgagggatattggagcaaaaaatattttggtccattcattaaataagtttaaatat
ggaaaaatttcttcgaaacataatgggagtgtgaaaaagggtgttatttttgctacctat
tcttcccttattggtgaaagccagtctggcggaaaatataaaacaagattaaaacaactt
ctgcattggtgtggtgatgactttgatggagttatagtatttgatgagtgtcacaaagca
aaaaacttatgtcctgttggttcttcaaaaccaacgaagacaggcttggcagttctggag
cttcagaacaaattgccaaaggccagagttgtctatgctagtgccactggtgcgtctgaa
cctcgcaacatggcctatatgaaccgtcttggaatatggggtgaaggaactccgtttaga
gaattcagtgatttcattcaagcagtggaacgcagaggtgttggtgccatggagatagtt
gctatggacatgaaacttagagggatgtacattgcacgacagctgagctttactggagtg
accttcaaaattgaggaagttcttctttcacagagctatgttaaaatgtataacaaagca
gtcaagctgtgggtcattgcaagagagcgatttcagcaagctgcagatctgatggatgct
gaacagcggatgaagaagtctatgtggggtcaattctggtctgctcaccagaggtttttc
aagtacttgtgcatagcatccaaagttaaaagggttgtacaacttgcccgggaagaaatc
aagaatggaaaatgtgttgtaattggtctgcagtctacaggagaagctagaactttagaa
gccttggaagagggtggaggagaactaaatgattttgtttcaactgccaaaggagtgctt
cagtcactcattgaaaaacatttccctgctccagacaggaaaaaactatatagtttgcta
ggaattgatctgtcagctccaagcaacaacagctcaccaagagatagtccttgtaaagaa
aataagataaagaagcggaaaggtgaagaaataactcgagaagccaaaaaagcacgaaaa
gtgggcggccttgctggtagcagttctgatgatagtggaagtgattctgacgcctctgac
aatgaagaaagcgactatgagagctctaaaaacatgagctctggggatgatgatgatttc
aacccgtttagagacgagtctagtgaagatgatgaagatgatccctggttaatcagaaaa
gaccacaaaaaaagcaaagataaaaaaaagaagaaaagtatagatccagattctattcaa
agtgccttattagcttcaggtcttggatccaaacgacctagtttttcttctacaccagtt
atctcagctgctcctaacagtgcaccagctaacagtaacaccaacagtaccaatagcctt
ataacaagtcaggatgctgtggaaagagcccaacagatgaagaaagacctgcttgataaa
ctagaaaaattagctgaagacctccctcctaatactctggatgaacttattgatgaactg
ggtggccctgagaatgttgctgagatgactggacgcaaagggcgagtagtgagcaatgat
gatggaagcatttcttatgagtcacgatctgaacttgatgtgcctgttgaaatactaaac
atcacggaaaaacagagatttatggatggagataagaatattgctatcatctcagaagct
gccagctcaggtatctcattgcaagcagatcggagagctaaaaatcaaagacgaagagtt
catatgactttggagttaccgtggagtgctgatagagcgatccaacaattcggaagaact
catagatcaaatcaagttactgcacccgagtatgtctttctgatttctgaattggcagga
gaacaaagatttgcatctattgttgctaaaagacttgagagtttgggggcgcttacgcat
ggtgatagaagagctacagaatctagagacctgagcagattcaactttgataataagtat
ggaagaaatgctttagaaatcgtcatgaaatccattgtcaacctggattctcctatggtg
tcaccacctccagactatcctggagagttctttaaagatgttcgacaaggactgatagga
gtgggattgatcaatgtagaagatcgctcaggaatccttactcttgataaagattataac
aatataggaaaattcttaaatagaattctgggcatggaggtacatcagcagaacgccttg
ttccagtactttgcagacacactcactgcagttgttcaaaatgccaaaaaaaatggaaga
tacgatatgggaatactagatcttggttcaggggatgaaaaggtgaggaaaagtgatgtg
aagaaatttctaactccagggtactcaacttctggccatgtagaattatacacaattagt
gtggagaggggcatgtcctgggaggaagcaaccaggatttgggctgacctgacaggacca
gatgacggcttttacttgtcattgcaaataaggaacaacaagaagactgccatcttagtt
aaagaagtgaatcctaaaaagaaactcttcttagtttatcggccaaatactgggaaacaa
ctgaaattagaaatcttttctgatctaagaaaaaagtataagaaggtggtttcagaggac
gcgctggtgcactggttggatcagtataattcatctgcagatacgtgtacacatgcttac
tggcgcggcaattgcaaaaaagcaagcttgggattggtgtgtgaaataggtcttcgttgc
cgcacatactatgtgttgtgtggctcggtgttgagtgtctggactaaagtggagggtgtt
cttgcgtctgtcagcggcacaaatgtgaaaatgcagatagttcggctaagaacagaagat
gggcagagaattgtaggtttgatcattccggcaaattgtgtgtctcctcttgtaaatctc
ctgtcgacttcagaccagtcccagcagctcgcggtgcagcagaagcagctgtggcagcaa
caccacccgcagagcatcgccaacctgagcaacgcctag
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