Perognathus longimembris pacificus (Pacific pocket mouse): 125349215
Help
Entry
125349215 CDS
T08928
Symbol
Ubc
Name
(RefSeq) polyubiquitin-C
KO
K08770
ubiquitin C
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03320
PPAR signaling pathway
plop04120
Ubiquitin mediated proteolysis
plop04137
Mitophagy - animal
plop04140
Autophagy - animal
plop05012
Parkinson disease
plop05022
Pathways of neurodegeneration - multiple diseases
plop05167
Kaposi sarcoma-associated herpesvirus infection
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125349215 (Ubc)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125349215 (Ubc)
04137 Mitophagy - animal
125349215 (Ubc)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
125349215 (Ubc)
09160 Human Diseases
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
125349215 (Ubc)
09164 Neurodegenerative disease
05012 Parkinson disease
125349215 (Ubc)
05022 Pathways of neurodegeneration - multiple diseases
125349215 (Ubc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125349215 (Ubc)
Ubiquitin system [BR:
plop04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
125349215 (Ubc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
125349215
NCBI-ProteinID:
XP_048199089
LinkDB
All DBs
Position
3:complement(88246583..88252144)
Genome browser
AA seq
913 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS
DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF
VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
STLHLVLRLRGGF
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt
gacaccatcgagaacgtcaaggccaagatccaggacaaggagggcatcccccctgaccag
cagaggctgatctttgcaggcaagcaactggaagatggccgcaccctgtccgactacaac
atccagaaagagtctactctgcacctggtgctccgtctccgtggtggcatgcagatcttc
gtgaagaccctgactggcaagaccatcaccctggaggtggagcccagtgacaccatcgag
aatgtcaaggccaagatccaggacaaggagggcatcccccctgaccagcagaggctgatc
tttgcaggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaagag
tctactctgcacctggtgctccgtctccgtggtggcatgcagatcttcgtgaagaccctg
actggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaatgtcaaggcc
aagatccaggacaaggagggcatcccccctgaccagcagaggctgatctttgcaggcaag
cagctggaagatggccgcaccctgtccgactacaacatccagaaagagtctactctgcac
ctggtgctccgtctccgaggtggcatgcagatcttcgtgaagaccctgactggcaagacc
atcaccctggaggtggagcccagtgacaccatcgagaatgtcaaggccaagatccaggac
aaggagggcatcccccctgaccagcagaggctgatctttgcaggcaagcagctggaagat
ggccgcaccctgtccgactacaacatccagaaagagtctactctgcacctggtgctccgt
ctccgaggtggcatgcagatcttcgtgaagaccctgactggcaagaccatcaccctggag
gtggagcccagtgacaccatcgagaatgtcaaggccaagatccaggacaaggagggcatc
ccccctgaccagcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctg
tctgactacaacatccagaaagagtctactctgcacctggtgctccgtctccgtggtggc
atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt
gacaccatcgagaatgtcaaggccaagatccaggacaaggagggcatcccccctgaccag
cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtccgactacaac
atccagaaagagtctactctgcacctggtgctccgtctccgaggtggcatgcagatcttc
gtgaagaccctgactggcaagaccatcaccctggaggtggagcccagtgacaccatcgag
aatgtcaaggccaagatccaggacaaggagggcatcccccctgaccagcagaggctgatc
tttgcaggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaagag
tctactctgcacctggtgctccgtctccgaggtggcatgcagatcttcgtgaagaccctg
actggcaagaccatcaccctggaggtggagcccagtgacaccatcgagaatgtcaaggcc
aagatccaggacaaggagggcatcccccctgaccagcagaggctgatctttgcaggcaag
caactggaagatggccgcaccctgtctgactacaacatccagaaagagtctactctgcac
ctggtgctccgtctccgtggtggcatgcagatcttcgtgaagaccctgactggcaagacc
atcaccctggaggtggagcccagtgacaccatcgagaatgtcaaggccaagatccaggac
aaggagggcatcccccctgaccagcagaggctgatctttgcaggcaagcagctggaagat
ggccgcaccctgtccgactacaacatccagaaagagtctactctgcacctggtgctccgt
ctccgaggtggcatgcagatcttcgtgaagaccctgactggcaagaccatcaccctggag
gtggagcccagtgacaccatcgagaatgtcaaagccaagatccaggacaaggagggcatc
ccccctgaccagcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctg
tccgactacaacatccagaaagagtctactctgcacctggtgctccgtctccgtggtggc
atgcagatcttcgtgaagaccctgactggcaagaccatcaccctggaggtggagcccagt
gacaccatcgagaatgtcaaggccaagatccaggacaaggagggcatcccccctgaccag
cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtccgactacaac
atccagaaagagtctactctgcacctggtgctccgtctccgaggtggcatgcagatcttc
gtgaagaccctgactggcaagaccatcaccctggaggtggagcccagtgacaccatcgag
aatgtcaaggccaagatccaggacaaggagggcatcccccctgaccagcagaggctgatc
tttgcaggcaagcagctggaagatggccgcaccctgtctgactacaacatccagaaagag
tctactctgcacctggtcctgcgtttgaggggaggtttttag
DBGET
integrated database retrieval system
