Perognathus longimembris pacificus (Pacific pocket mouse): 125349235
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Entry
125349235 CDS
T08928
Symbol
Pus1
Name
(RefSeq) tRNA pseudouridine synthase A isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plop03016
]
125349235 (Pus1)
Enzymes [BR:
plop01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
125349235 (Pus1)
Transfer RNA biogenesis [BR:
plop03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
125349235 (Pus1)
Prokaryotic type
125349235 (Pus1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
125349235
NCBI-ProteinID:
XP_048199124
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All DBs
Position
3:90330230..90336649
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AA seq
424 aa
AA seq
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MGLSGLRAALLTAWGRWAARPGLRAPRLPPMAGNEAPPALAPHQPDRKARGGWVWEEAQQ
HPPKRLRGAEEGEPPRKPPKRKIVLLVAYSGKGYHGMQRNVGSSQFRTIEDDLVSALVRS
GCIPENHGTDMRKMSFQRCARTDKGVSAAGQVVSLKVWLIDDILDKINSHLPSHIRILGL
KRVTGGFNSKNKCDARTYFYMLPTFAFAHKDRDVQDETYRLSTETLQQVNRLLACYTGTH
NFHNFTSQKGPKEPSARRYILEMYCEEPFVREGLEFAVIKVKGQSFMMHQIRKMVGLVVA
IVKGYAPESVLERSWGEEKVDVPKAPGLGLVLERVHFEKYNQRFGRDGLHEPLDWTQEEG
KVAAFKEQHIYPTIVSTERDERSMAQWLSTLPVHDFSATALAAASTSTKVPGSLEGSEGD
GDTD
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgggcctctcgggcctgcgggcagcgctgctgacggcctggggacggtgggccgcgcgt
cccggcctgcgggcgccccgcctgccccccatggccgggaacgaggcccccccagcgctg
gctccgcaccagcccgaccggaaggctcgcggaggctgggtctgggaggaagcgcagcag
cacccgcccaagaggctgcggggcgccgaggaaggggagccgccgcggaagccgcccaag
cgcaagatcgtgctgctcgtggcctactcggggaagggctaccacggcatgcagaggaat
gtggggtcctcacagttcaggacaattgaggatgatttggtatctgctctggtccggtcg
ggctgcattcccgaaaatcatggcacagacatgaggaagatgtcctttcagcgatgtgcc
cgcacagacaagggtgtgtctgcagctggccaggtagtgtccctgaaagtatggctgatt
gatgacattctggacaagatcaacagccaccttccatcccacattcggatcctgggactg
aagagggtgacaggtgggttcaactccaagaacaagtgcgatgccaggacatacttttat
atgctgcccacctttgcctttgcccacaaggaccgggatgtgcaggacgagacctaccgc
ctgagcacggagaccctgcagcaagtcaacaggctcctggcctgctacacaggcacccac
aatttccacaatttcacctcacagaaggggccgaaggagcccagtgcacggcgctacatc
ctggagatgtactgtgaggagccttttgtgcgtgagggcctggagtttgctgtaatcaag
gtcaagggccagagcttcatgatgcaccagatccgaaaaatggttggcctggtagtggcc
attgtgaaaggctatgcccccgagagtgtgctagagcgcagctggggggaggagaaagtg
gatgttccaaaggcacctgggcttggcctggtcctggagagggtgcattttgagaaatat
aatcagcgctttggcagggatgggctgcatgagccactggactggactcaggaggagggg
aaggtggcagccttcaaggaacagcacatctaccccaccattgtcagcacggagcgggac
gaaaggtccatggcccagtggctgagcaccttgcctgtccatgacttcagtgccactgcg
ctcgcagctgccagcacaagcaccaaggttcctggttccttggagggcagcgaaggggat
ggagacacggactga
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