Perognathus longimembris pacificus (Pacific pocket mouse): 125349238
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Entry
125349238 CDS
T08928
Symbol
Ddx51
Name
(RefSeq) ATP-dependent RNA helicase DDX51
KO
K14807
ATP-dependent RNA helicase DDX51/DBP6 [EC:
5.6.2.7
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plop03009
]
125349238 (Ddx51)
Enzymes [BR:
plop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125349238 (Ddx51)
Ribosome biogenesis [BR:
plop03009
]
Eukaryotic type
Pre-60S particles
Helicases
125349238 (Ddx51)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SWI2_SNF2
T4SS-DNA_transf
Motif
Other DBs
NCBI-GeneID:
125349238
NCBI-ProteinID:
XP_048199150
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All DBs
Position
3:complement(90439067..90444083)
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AA seq
645 aa
AA seq
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MALFHVARYSGLDAGQPEAEAEPGEHLRARALLERLQCRARERQQQRQRQEPETAAEAPE
AAARRRRRPRRRRRISGLAPGSPDAPLVKRRKVNSEDAGAGSGETAPGVRCERNEAQTPL
DGRSVEETTGPPSGPGPVLGGFTRRKTPKVQPFLPLWLAEPSCVRKNVTEDLTPLEAIPE
VHPDLQKQLRAHGITFYFPVQAAVIPALLENTASGFLVGRGGYQPSDLCVSAPTGSGKTL
AFVIPVVQALLHRVICHIRALVVLPTKELAQQVSKVFNIYTDPTPLRVALVTGQKSLAKE
QESLVQKIADGYRCLADIVVATPGRLVDHIDQTPGFSLQQLRFLVIDEADRMIDSMHQSW
LPRVVAAAFHSKGPADACALLQRRQPQAVTAHSTCYPQMPLQKLLFSATLTQNPEKLQRL
GLYQPRLFSTGLVQRGPQDGDITVDGNLQGKYTFPMGLRHHYVPCRLSSKPLAVLHLVLS
MDISRTLCFTNSRENAHRLFLLVQAFGGVSVAEFSSCYGPGQRKKILKQFEQGKIQLLIS
TDATARGIDIQGVELVVNYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQEKKFLRML
AEAGVPELTCHEVPNELLQPLVPQYKEALSQLEMTVKEEKKSKLV
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtttcacgtcgcccggtactcagggctcgatgccggtcagccggaggccgaa
gcggagcccggagaacacctcagggcccgtgcactgctcgagaggctgcagtgtcgggcc
cgcgaacggcagcagcagcggcagcggcaggaacctgagactgccgcggaggctccggag
gctgcggcccggcggcggcggcggcctcggcggaggcggcggataagcggcttggcgccg
gggagcccggacgcgcctctggtgaagcggcggaaagtgaacagcgaggacgctggcgcc
ggtagcggcgagacagcaccgggggtgcgctgcgagcgcaacgaggcccagacgccccta
gacgggcggtccgtggaggagacgactgggcctccgtcgggaccaggcccagtgctggga
ggcttcaccaggaggaagacgccaaaggtccagccttttctgccactctggctggctgag
ccaagctgtgtcaggaagaatgtcaccgaagatcttaccccacttgaagccatccctgag
gtgcaccctgacctgcagaaacagctgagggcacatggcatcaccttctactttccagtc
caggcagctgtgattccagcccttctagagaacacagccagtgggtttctggtggggaga
gggggataccagcccagtgacctctgtgtttctgccccaaccggcagtgggaaaactctg
gcctttgtcatcccagtggtacaggccctactgcaccgcgtgatttgccacatccgtgcc
ctggttgtgctgcctaccaaagaattggcccagcaggtgagcaaagtgttcaacatttac
acagaccccacgcctctacgtgtggccctggttactggacagaagtcgctggctaaggag
caagagagccttgtccaaaagatagcagatggctaccgctgcctggctgacattgtggtg
gccacacctggccgcctggtggaccacattgatcagactccaggattcagcctccaacag
ctccgcttcctggtgattgatgaggctgaccgaatgattgacagcatgcatcaatcttgg
ttgccacgggtggtggcagcagctttccacagcaagggccctgcagatgcctgtgcccta
ctccagagaagacaaccccaagctgtgactgcccacagcacctgctaccctcagatgcct
ctgcagaaattgctgttctcagccaccctgacacagaatcctgagaagctgcagcggctt
ggtctctatcagcctcggcttttctctacaggcctggtacagaggggcccccaagatggg
gacatcacagtggatggaaacttacagggaaagtacaccttccccatggggctcaggcac
cactatgtgccttgcagactcagctctaagccacttgcagtcctgcatctggttctcagt
atggacatttccaggaccctttgcttcaccaattctcgagagaatgcccacaggcttttc
ctgctagtacaagcttttgggggcgtaagtgtggctgagttttcctcctgctacgggcct
ggtcagaggaagaagatattgaagcagtttgagcagggcaaaatccagctcctcatcagt
acagatgccactgctcgaggcattgacattcagggtgtggagctggtggtcaactatgat
gcgccccagtatctgaggacctatgtgcacagagttgggagaacagctcgagctggaaaa
actggacaggccttcaccctactcctgaaagtgcaggagaagaagttcctccgcatgctg
gcagaagccggggtgcctgagctgacctgccatgaggtccccaatgagctcttgcagcct
ctggttcctcagtacaaggaggccctgtcccaactagagatgactgtcaaggaagagaaa
aagtccaagttggtctag
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