Perognathus longimembris pacificus (Pacific pocket mouse): 125349328
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Entry
125349328 CDS
T08928
Symbol
Ppil2
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125349328 (Ppil2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
plop03041
]
125349328 (Ppil2)
03110 Chaperones and folding catalysts [BR:
plop03110
]
125349328 (Ppil2)
04121 Ubiquitin system [BR:
plop04121
]
125349328 (Ppil2)
Enzymes [BR:
plop01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
125349328 (Ppil2)
Spliceosome [BR:
plop03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
125349328 (Ppil2)
Complex C
U4/U6.U5 tri-SnRNP related factors
125349328 (Ppil2)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
125349328 (Ppil2)
Chaperones and folding catalysts [BR:
plop03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
125349328 (Ppil2)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
U-box type E3
125349328 (Ppil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
U-box
Motif
Other DBs
NCBI-GeneID:
125349328
NCBI-ProteinID:
XP_048199345
LinkDB
All DBs
Position
3:complement(94354994..94391049)
Genome browser
AA seq
521 aa
AA seq
DB search
MGKRQHQKDKMYITCAEYTHFYGGKKPDIPQSNFRRLPFDHCSLSLQPFTHPVCTPEGVI
FDLPNIYPWLTKYGINPSNGEKLDAKSLIILNFAKNNEGKYHCPVLFTVFTDNTHIVAIR
TTGNVYAYEAVEQLNIKAKNFRDLLTDEPFSRQDIITLQDPTNLDKFNVSNFFHVKNNMK
VSDPDEEKAKQDPSYYLKNTNAETRETLQELYKEFKGDEILAATMKAPEKKKVDQLNAAH
YSTGKVSASFTSTAMVPETTHEAAAIDEDVLRYQFVKKKGYVRLHTNKGDLNLELHCDLT
PKTCENFIKLCRKHYYHGTIFHRSIRNFVIQGGDPTGTGTGGQSYWGKPFKDEFRPNLSH
TGRGILSMANSGPNTNKSQFFITFRSCAYLDKKHTIFGRVVGGFDTLTVMENIESDPKTD
RPKEEIRIHTTTVFVDPYEEADAQIAQERKKTQLEEAPEAKVKASQPQSGSQGPQTYRQG
VGKYINPAATKRAAEEEPSTSAAASVAKKRPSRGFGDFSSW
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcgacagcaccagaaggacaagatgtacattacctgtgctgaatacactcac
ttctatggtggcaagaagccagatatcccacagtcaaattttcgtcgtctaccttttgac
cactgtagtctctctctgcagccattcacccatccagtctgcactccagaaggtgtcatc
tttgacttgccgaatatttatccctggcttacaaagtatgggatcaaccccagcaatgga
gagaaacttgatgcaaaatccctgatcattctgaactttgccaaaaacaatgaagggaag
taccactgcccagtactgttcactgtgttcactgacaacacccacattgtggctattagg
acaactggcaatgtctacgcctatgaggcagtggagcagctgaacatcaaggccaagaat
ttccgggacctgctgactgatgagcccttttcccgccaggatatcatcaccctccaggat
cccaccaatctggacaaatttaacgtctccaacttcttccatgttaagaataacatgaaa
gtgtcggacccagatgaggaaaaggccaaacaggacccatcttactatttgaaaaacaca
aatgctgagacccgagagaccctgcaggagctctacaaggaattcaaaggggatgagatc
ctagcagccacaatgaaggccccggagaagaaaaaagtggaccaactgaatgctgcccac
tattccacggggaaggtcagcgcttcctttacctccactgccatggtgccggaaacaact
cacgaagcagccgccattgacgaagatgtgctgcgttaccagtttgtgaagaagaagggc
tatgtacgactgcacaccaacaagggagatctcaacctggagctgcactgtgatttgaca
ccaaaaacctgtgagaacttcatcaagctctgcaggaagcactattaccatggcaccatc
tttcacaggtccatcaggaactttgtgatccaaggtggtgaccccacaggcactggcaca
ggggggcaatcgtactggggaaagcccttcaaagatgagttccggcccaacctctctcac
acaggccgtggcatcctcagtatggccaactcgggacccaacaccaataagtctcagttc
tttatcacattccgctcctgtgcttacctggataagaagcataccatctttggacgggtt
gttgggggctttgatacgctgacagtcatggagaatatagaaagtgaccccaaaactgac
cgacctaaggaggagatccgcatccacaccaccacagtattcgtggacccgtatgaggag
gcagatgcccagattgcccaggagcggaagaagacacagcttgaagaggccccagaggcc
aaggtcaaggccagccagccccagtctggtagccaaggcccccagacataccgtcagggg
gtgggcaagtacatcaacccagcagccacgaaacgggctgcagaagaagagccatcaacc
agtgcagctgcctctgtggccaagaaaaggcccagccggggttttggagacttcagctcc
tggtag
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integrated database retrieval system
