Perognathus longimembris pacificus (Pacific pocket mouse): 125349369
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Entry
125349369 CDS
T08928
Name
(RefSeq) protein HIRA isoform X1
KO
K11293
protein HIRA/HIR1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plop03036
]
125349369
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
125349369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hira
Beta-prop_CAF1B_HIR1
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
ANAPC4_WD40
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
HIRA_B
NBCH_WD40
Mcl1_mid
WDR90_beta-prop_4th
SUIM_assoc
WD40_like
Motif
Other DBs
NCBI-GeneID:
125349369
NCBI-ProteinID:
XP_048199412
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All DBs
Position
3:complement(95330605..95418797)
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AA seq
1042 aa
AA seq
DB search
MKLLKPTWVNHNGKPIFSVDIHPDGTKFATGGQGQDSGKVVIWNMSPVLQEDDEKDENIP
KMLCQMDNHLACVNCVRWSNSGMYLASGGDDKLIMVWKRATYIGPSTVFGSSGKLANVEQ
WRCVSILRSHSGDVMDVAWSPHDAWLASCSVDNTVVIWNAVKFPEILATLRGHSGLVKGL
TWDPVGKYIASQADDRSLKVWRTLDWQLETSITKPFDECGGTTHVLRLSWSPDGHYLVSA
HAMNNSGPTAQIIEREGWKTNMDFVGHRKAVTVVKFNPKIFKKKQKNGSSAKPSCPYCCC
AVGSKDRSLSVWLTCLKRPLVVIHELFDKSIMDISWTLNGLGILVCSMDGSVAFLDFSQD
ELGDPLSEEEKSRIHQSTYGKSLAIMTEAQLSTAVIENPEMLKYQRRQQQQQQLDQKTAT
AREMGSASSVTGVVNGESLEDIRKNLLKKQVETRTADGRRRITPLCIAQLDTGDFSTAFF
NSIPLSGSLAGSMLSSPSSQQLLPLDTSTPSFGASKPCTEPVAATGARPTGESVSKDSMN
ATSTPAALSPSVLTTPSKIEPMKAFDSRFTERSKATPGAPSLTSVTPTSVERLKDQNLMK
ELRPRDLLESSSDSDEKAPLSKPSSLSKRKLELEVETVEKKKKGRPRKDTRLLPVSLSVQ
SPATLTAEKEAMCLSAPALTLKLPVPGPQRAFTLQVSSDPSMYIEVENEVTAVGGVRLSR
LKCNREGKEWETVLTSRILTAAGSCDVVCVACEKRMLSVFSTCGRRLLPPILLPSPISTL
HCTGSYVMALTAAATLSVWDVHRQVVVVKEESLHSILAGSDMTVSQILLTQHGIPVMNLS
DGKAYCFNPSLSTWNLVSDKQDSLAQCADFRNSLPSQDAMLCSGPLAIIQGRTSNSGRQA
ARLFSVPHVVQQETTLAYLENQVAAALTLQSSHEYRHWLLLYARYLVNEGFEYRLREICK
DLLGPVHCSTGSQWESTVVVGASFLLATQLLLTHEGREFFLKLKYFESSPHEISSPLSWV
PHSVRGQHAGHSMTRQELGFGT
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcctgaagccaacctgggtcaaccacaatggcaagccgattttttcagttgat
attcaccctgacgggaccaagtttgcaactggaggacaagggcaggattctgggaaggtt
gtgatttggaatatgtctccagtcctccaggaggatgacgagaaggatgaaaatattccc
aagatgctttgccagatggacaatcacttagcatgtgtgaactgtgtgcggtggtcaaac
agtgggatgtatttagcttctgggggagatgacaaactgattatggtgtggaagcgggct
acgtacatcgggcccagcactgtgtttggctccagtggcaagcttgccaatgttgagcag
tggcggtgtgtctccatcctccggagtcactcaggcgatgtgatggatgtagcatggtct
cctcatgatgcctggctagcctcatgcagcgtggataacactgttgtcatctggaatgct
gtgaagtttccagaaattctcgctactttgagaggtcattctggcttggtgaaagggtta
acgtgggaccctgttggtaaatatattgcctcccaagctgatgatcgcagcctgaaggtc
tggaggacactggattggcagctcgagaccagcatcacgaagccttttgatgagtgtgga
gggacaacccatgtgctgcggctcagctggtcacctgatgggcattacctggtatctgcc
catgccatgaacaactctggccccactgcccagatcattgagcgggagggctggaagacc
aacatggactttgtgggacaccggaaagctgtgactgttgtgaaattcaacccaaaaatc
ttcaaaaagaagcagaagaatgggagttccgcaaagcccagttgcccctactgctgttgt
gctgtgggtagcaaggaccgctcactctctgtgtggctcacatgtttaaaacggcctctg
gttgtcatccatgaactgtttgacaagtctatcatggatatttcctggactctaaacggt
ctgggcattctggtgtgctccatggatggctctgtggcattccttgacttctcccaggat
gagctcggagaccccctgagtgaggaagagaagagccgcattcaccagtccacttatggc
aagagcctagccatcatgaccgaggcccagctctccacagctgtcatcgagaaccctgag
atgctcaagtaccagaggaggcagcagcagcagcagcaactggaccagaagactgccaca
gccagggagatgggctcagcttcctcagtaacaggtgttgtcaatggagagagtctggaa
gatatcaggaagaaccttttgaagaaacaagttgaaacacggacagcagatggtcggaga
agaatcacgcctctctgcatagcacagctggacactggggacttctccacggccttcttt
aacagcatcccactctccggctccctggcaggctccatgctctcctctcctagcagtcag
cagttactgccactggacaccagtaccccctccttcggcgcctcgaagccttgcacagaa
cctgtggcagccactggtgccaggcctacaggtgaatctgtcagtaaggacagtatgaat
gctacctctactcctgctgcattgtcaccctccgtgttaacgaccccatccaagattgaa
cccatgaaagcatttgactcccggtttacagagcggtccaaagccacaccaggtgctcct
tccttgaccagtgtgaccccaacatctgttgaaaggttgaaagatcagaacctcatgaaa
gagctgaggccccgggacctcctggagagcagcagtgacagtgacgaaaaggccccctta
tccaagccctcttccctgtctaagcgaaaacttgagctggaggtggagactgtggaaaag
aagaagaaagggcgccctcggaaagacacccgtctcctgcctgtgtccctgtctgtccag
tctccagctaccctgactgcagagaaggaggctatgtgtctgtctgcaccagcacttaca
ttgaagctgcctgttccaggcccccagcgagcattcactctccaggtgagctctgaccct
tccatgtatatcgaggtggagaatgaagtgacagctgtgggaggagtgaggctgagccgc
ctcaagtgcaacagggaagggaaggagtgggagacggtgctcaccagccggatcctcact
gccgcaggcagctgtgacgtggtgtgtgttgcctgtgaaaaaaggatgctgtcagtgttc
tccacctgtggtcgccgcctcctccctcccatcctcttgccttcccccatctctactttg
cactgcacgggttcctacgtcatggcgctcactgctgctgccacactgtcggtctgggat
gttcataggcaagtggttgtagtaaaagaagaatctctacactccatcttggcaggaagt
gatatgacagtgtcacagatcttgttgacgcagcatggaatcccggtgatgaacttgtct
gatgggaaggcatactgctttaatccgtcactctctacgtggaacctagtttctgacaag
caggactcactggcgcagtgtgcggactttaggaacagcctaccatcccaggacgccatg
ctgtgctcaggaccgttagccataatccagggccgcacctccaactctggaaggcaagct
gcccggctgttttccgtgcctcatgtggtacagcaagagaccacgctggcctacctagag
aaccaggtggcagcagcacttaccctgcagtccagccacgagtaccgccattggctcctc
ctctacgcacggtaccttgtcaatgaagggtttgaataccgactccgagaaatatgcaag
gatttactgggtccggttcattgctccactggaagccagtgggagtcgacagtagtggta
ggtgcttctttccttcttgccacacaactcctcttgacacatgaaggtagagagttcttt
cttaagctaaagtactttgaaagttctccccatgagatttcaagccccctgtcctgggtc
ccacattcagtgagaggccagcatgctggccactccatgactagacaggagctgggcttc
gggacttag
DBGET
integrated database retrieval system
