Perognathus longimembris pacificus (Pacific pocket mouse): 125349382
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Entry
125349382 CDS
T08928
Symbol
Arvcf
Name
(RefSeq) armadillo repeat protein deleted in velo-cardio-facial syndrome isoform X1
KO
K28154
splicing regulator ARVCF
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
plop03041
]
125349382 (Arvcf)
Spliceosome [BR:
plop03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125349382 (Arvcf)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_EZ
HEAT_2
HEAT
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
125349382
NCBI-ProteinID:
XP_048199434
LinkDB
All DBs
Position
3:complement(95842904..95894138)
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AA seq
967 aa
AA seq
DB search
MEDCNVHSAASILASVKEQEARFERLTRALEQERRHVALQLERAQQPGMGSGGVVGSGQP
LPMAWQQLVLQEQSPGSQASLAAMPEAPEVLEETVTVEEDPGTPTSHVSIVTSEDGTTRR
TETKVTKTVKTVTTRTVRQVPLGPDGLPLLDGGPPLGPFADGPLDRHFLLRGGGPAATLS
RAYLSSGTGFADGPEPRDGPNYGSLSRGLGVRPPRTGPLGPGPSDGCFTLPGRREAFPVG
TEPGPPSGRSLPERFQAEPYGLEDDARSLAADDEGGPDLEPDYGTATRRRPECGRTLRAR
AYEDVADDAGELTDERPPFPAATAPLAQPERGSLGSLDRVVRRSPSVDSARKEPRWRDPE
LPEVLAMLRHPVDPVKANAAAYLQHLCFENESIKRRVRQLRGLPLLVALLDHPRAEVRRR
ACGALRNLSYGRDTDNKAAIRDCGGVPALVRLLRAARDNEVRELVTGTLWNLSSYEPLKM
VIIDHGLQTLTHEVIVPHSGWEREPNEDSKPRDAEWTTVFKNTSGCLRNVSSDGAEARRR
LRECEGLVDALLHALQSAVGRKDTDNKSVENCVCIMRNLSYHVHKEVPGADRYQEAEPGP
PGSATGSQRRRRDDASCFGGKKAKEEWFHQGKKDGEVDQNFDTLDLPKRTEAAKGFELLY
QPEVVRLYLSLLTESRNFNTLEAAAGALQNLSAGNWMWATYIRATVRKERGLPVLVELLQ
SETDKVVRAVAIALRNLSLDRRNKDLIGSYAMAELVRNVRNAQAPVRPGARLEEDTVVAV
LNTIHEIVSDSLDNARSLLQARGVPALVALVASSQSVREAKAASHVLQTVWSYKELRGAL
QRDGWTKARFQSTAATAKGPKGTLSPGGFDDSTLPLVDKSLDGEKPGSRDVISMDTLGPD
GYSTGYSTVDRRERKALGSDSAGEASEKEPLKPDPGRKALPPGPSRPSVRLVDAVGDAKP
QPVDSWV
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggaggactgcaatgtgcactcagctgccagcatcttggcctccgtgaaggaacaggag
gcccgcttcgagcggctgacgagggccctggaacaagagcggcgccatgttgccctgcaa
ctggagcgagcccagcagcctggtatgggcagtggaggtgtggtgggcagtgggcagccc
ctgccgatggcctggcaacagctggttctgcaggaacagagcccaggaagccaggcatcg
ctggccgcaatgccagaggcacctgaggtgctagaggagacagtgacagtagaggaagac
cctggcacacctacttcccatgtgtccattgtcacgtctgaagatggcacaacacggcgc
accgagaccaaggtcaccaagacagtcaagacagtgaccacgaggacagtacgccaggtg
cctttgggcccagacggactccccttgctagatggtggccctccactcggtccctttgct
gatggccccttggaccggcatttcctgctgcgcggtggtggcccagcagccacactttcc
cgggcttacctcagcagtgggactggctttgccgatggccctgagccccgtgatggccct
aactatggcagcctgtcccgagggctaggggtacggcccccacgcacgggacccctgggc
ccaggacctagtgatggctgcttcactctgcctggccgccgggaagccttccctgtaggt
actgaacctggtcctccaagtggccgctccctccctgagcgcttccaggcagagccctat
ggcttggaggatgatgcacgaagtctggctgctgatgatgaggggggccctgatctggag
cctgactatggtacagccacacgaaggagacctgagtgtggacggaccctccgtgccagg
gcttatgaggatgtggctgatgatgctggtgagctgacagatgagcggcccccattccca
gcagcaacagcaccactggcccagcctgagcgaggcagcctgggcagtctggaccgagtg
gtacgacgctcaccttcagtagacagtgctcgcaaggagccacgctggcgggaccccgag
ctgcctgaggtgttggctatgctgcggcaccctgtggaccccgtgaaggccaatgcggcc
gcttacctgcagcacttatgctttgagaatgagagcattaagcggcgtgttcggcagctg
cgtgggctgccgctgcttgtggcactgttggaccaccctcgggccgaggtgcggcgtcgg
gcctgtggggcactgcgcaacctctcctatggccgtgacacagacaacaaggctgccatc
cgggactgcggaggcgtgcctgccctggtacgcctgctgcgggctgcccgtgacaatgag
gttcgcgagctggtcactggcacactctggaacctgtcatcctatgagcctctgaagatg
gtcatcattgaccatggtctgcagacactgacccatgaggtcatagtgccccactcgggc
tgggagcgtgagcccaatgaagactccaaaccacgggatgctgagtggacgactgtcttc
aagaacacatctggctgcttgaggaacgtgagttcggatggcgccgaggcccgccggcga
ctccgggagtgtgaagggctggtggatgcgctcctacatgccctgcaatcggcagtgggc
agaaaggacacggacaacaagtcagtggagaactgcgtgtgcatcatgcggaacctgtcc
taccacgtgcataaggaagtgcctggggctgacaggtaccaggaggctgagcctgggccc
ccaggcagtgccacaggctcccagcgccggaggagagatgatgcaagctgctttggtgga
aagaaggctaaagaggagtggttccatcaagggaagaaggatggtgaggtggaccagaac
tttgacacactggacctgcccaagcgaactgaggctgctaaaggctttgagctgctatac
cagcctgaagtggtacgtctctatctctccctcctcacggagagccggaacttcaacacc
ctggaggccgcagcaggtgccctgcaaaatctcagcgcaggcaactggatgtgggccacg
tacatccgcgccactgtgcgtaaagagcgcgggctgccggtactggtagagctgctgcaa
tcggagaccgacaaagtggtgcgcgcagttgccattgccttgcgaaacctctctctggac
cgccgcaacaaagaccttattgggagctatgccatggcagagctagtgcggaacgttcgc
aatgcgcaggcaccagtccgccccggggctcgcttggaggaggacaccgtggtggctgtg
ctcaacaccatccatgagatcgtgtctgatagcctggacaatgcgcgctcactcctgcag
gcccgtggtgtgccagcgctggtggcactcgtcgcctccagccagtctgtacgcgaggca
aaggccgcatcccacgtgcttcagacggtgtggagctacaaagagttaagaggagccttg
cagagggacggctggaccaaggcgcgcttccagtcaactgctgccactgccaaggggccc
aagggaacactgagcccagggggcttcgatgacagcacactgccactggtagacaagagc
ctggatggtgagaagccaggcagccgagatgtgatctccatggacacacttggcccagat
ggatattccactggatattctactgtggaccgaagggagcggaaggccctgggcagtgac
tctgcaggagaagcctcagaaaaggaaccattgaagcccgaccctggcaggaaggccctt
cctcctgggcccagcaggccctcagtcaggctggtggacgccgtaggggatgctaagcct
cagcccgttgactcctgggtctag
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