Perognathus longimembris pacificus (Pacific pocket mouse): 125349406
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Entry
125349406 CDS
T08928
Symbol
Specc1l
Name
(RefSeq) cytospin-A
KO
K23028
cytospin
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
plop04812
]
125349406 (Specc1l)
Cytoskeleton proteins [BR:
plop04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
125349406 (Specc1l)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CH
ATG17_like
DUF4763
ATG16
Prefoldin_2
CAMSAP_CH
Globin
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
125349406
NCBI-ProteinID:
XP_048199483
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Position
3:96783099..96926398
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AA seq
1118 aa
AA seq
DB search
MKKASRSVGSVPKVSGTSKSQTTEKIKPENSSSVSTGSKLVKPGTAAPLSKTKSNDDLLA
GMAGGVTVTNGVKGKKSTGSSASPSASAPVMTTVESKSKISSGISSSTKRSTSAGNKESS
STRERLRERTRLSQSKKLPSAGQVASDVALAKRSRSRTAAECDVRMSKSKSDNQISDKAA
LEAKVKDLLTLAKTKDVEILHLRNELRDMRAQLGINEDPPEGDGKSEEKETIITHQPTDV
ESTLLQLQEQNTAIREELNQLKNENRMLKDRLNALGFSLEQRLDNSEKLFGYQSLSPEIT
PGNQSDGGGTLTSSVEGSAPGSVEDLLSQDENTLMDHQHSNSMDNLDSECSEVYQPLTSS
DDALDAPSSSESEGIPSLERSRKGSSGNASEVSVACLTERIHQMEENQHSTSEELQATLQ
ELADLQQITQELNSENERLGEEKVILMESLCQQSDKLEHFSRQIEYFRSLLDEHHISYVI
DEDVKSGRYMELEQRYMDLAENARFEREQLLGVQQHLSNTLKMAEQDNKEAQEMIGALKE
RSHHMERIIESEQKGKATLAATLEEYKATVASDQIEMNRLKAQLENEKQKVAELYSIHNS
GDKSDIQDLLESVRLDKEKAETLASSLQEDLAHTRNDANRLQDTIAKVEDEYRAFQEEAK
KQIEDLNMTLEKLRSELEEKETERSDMKETIFELEDEVEQHRAVKLHDNLIISDLENTVK
KLQDQKHDMEREIKTLHRRLREESAEWRQFQADLQTAVVIANDIKSEAQEEIGDLKRRLH
EAQEKNEKLTKELEEIKSRKQEEERGRVYNYMNAVERDLAALRQGMGLSRRSSTSSEPTP
TVKTLIKSFDSASQVPNPAAAAIPRTPLSPSPMKTPPAAAVSPMQRHSISGPISTSKPLT
ALSDKRPNYGEIPVQEHLLRTSSTSRPASLPRVPAMESAKTISVSRRSSEEMKRDMSASE
GASPASLMAMGTTSPQLSMSSSPTASVTPTTRSRIREERKDPLSALAREYGGSKRNALLK
WCQKKTEGYQNIDITNFSSSWNDGLAFCALLHTYLPAHIPYQELNSQDKKRNFTLAFQAA
ESVGIKSTLDINEMVRTERPDWQNVMLYVTAIYKYFET
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagcaagcaggagtgttggctcagtgcctaaggtatctgggacaagtaaatca
caaacaacagaaaaaattaagcctgaaaacagctcttcagtttctaccggaagcaaactt
gtaaaacctggaacagcagcaccactgtcaaagaccaagagcaatgatgaccttttagct
gggatggctggaggagtaacagtcactaatggtgttaaaggaaagaaaagcactggctca
tctgcttctccttcagcatctgcccctgtcatgaccactgtggagagcaaatccaagatc
agctctggcataagttcgtcaaccaagcggagcacttctgcaggtaataaggaatccagt
tctactagagaaagattacgggaacgcacccgactaagccagagcaaaaagctaccttcc
gcaggtcaggtggctagtgacgtggcattggcaaagcgttcccgaagtcgcactgctgcg
gaatgtgatgttcgaatgagcaagtcgaaatcggacaatcagatcagcgacaaagctgct
ttggaagccaaagtgaaagatcttctcacactggcaaaaacaaaggacgtggagatttta
catttgagaaatgaactccgagatatgcgtgctcagctgggcattaatgaagatcctcct
gagggtgatggaaagtctgaggagaaggaaaccatcatcactcaccagccaactgatgtg
gagtccactttgttgcagctgcaggaacagaacacggccatccgcgaggaactcaaccag
ctgaaaaatgagaaccgaatgctgaaggacaggttaaatgcattgggcttttcccttgag
cagagactggacaattctgaaaaactgtttggctatcagtcgctgagcccagaaatcact
cctggcaaccaaagtgatggagggggaactctgacttcctccgtggaaggctctgccccg
gggtcagtcgaagatctcctgagccaggatgaaaatacactcatggaccatcagcacagt
aactccatggacaacctagacagtgagtgtagtgaggtgtaccagcctctcacctccagc
gatgatgccctggacgccccgtcatcttctgagtccgagggcatcccgagcctagaacgc
tctcggaaggggagcagtgggaatgccagtgaagtgtctgtggcttgcttgacagaacga
attcaccagatggaagagaaccagcacagcacgagtgaggaacttcaggcaaccctgcaa
gagctggctgatttacagcagatcactcaagaattgaacagtgaaaacgaaaggctcgga
gaggagaaggtcattctcatggagtccttatgtcagcaaagtgataagttggaacacttt
agtcgacagattgaatatttccgttcccttctagatgagcatcacatttcttacgtcata
gatgaagatgtgaaaagtggacgctacatggaattagaacagcgttacatggacttagct
gagaatgctcgtttcgagcgagagcagctcctgggagtccagcagcatttaagcaatact
ttgaaaatggcagaacaagacaataaggaagctcaagaaatgataggtgcgctcaaagaa
cgcagtcaccacatggagcgaattattgagtctgagcagaagggcaaagcaaccttggca
gccacattggaggaatataaagccactgtggctagcgaccagattgagatgaatcgcttg
aaagctcagctggagaatgaaaaacagaaagtggctgaactctattctattcataactct
ggagacaaatctgatattcaggatctcttggaaagtgttaggctggacaaagaaaaagca
gagactctggctagtagcctgcaggaagatctggctcatacccgaaatgatgccaatcgt
ttgcaggacaccattgcaaaggtagaagatgaataccgagccttccaagaagaagctaag
aaacaaatagaagatttgaatatgacattagaaaaactaagatcagagctggaggaaaaa
gaaacagaaagaagtgacatgaaagaaaccatctttgaacttgaagatgaagtagaacag
catcgagctgtgaaacttcatgataacctcattatttctgatttagagaacacagttaaa
aagctccaggaccaaaagcatgatatggaaagagagatcaagacactccacaggagactt
cgggaagaatctgcagaatggcggcagtttcaagccgatttacaaacagcagtagtcatt
gcaaatgacattaaatctgaagcccaagaagagattggtgatctgaagcgccgactgcat
gaagcccaagagaaaaatgagaaactcacaaaagaattggaggaaataaagtcacgcaag
caagaggaggagcgaggccgagtgtataactacatgaatgcggttgagagagatttggca
gctttaaggcaagggatgggactgagcagaaggtcctcgacttcctcagagccaactcct
acagtaaaaaccctcatcaagtccttcgacagtgcatctcaagtaccaaaccctgctgca
gctgcaattcctcgcacgcctctgagtccaagtcctatgaaaactcctcctgcagctgct
gtctcccccatgcagagacattccataagtggaccaatctcaacatccaagcccctaaca
gccttgtcggataagagaccaaactatggggaaatccctgttcaagagcatctactgaga
acatcttccaccagccgacctgcttctctaccaagagttcctgccatggaaagtgccaaa
accatctcagtgtctcgacgaagtagtgaagaaatgaaacgggacatgtctgcatcggag
ggtgcatcgccagcctctctcatggctatgggaaccacatcgccacagctctccatgtct
tcctctcccacagcgtctgtgacccccaccacccggagccggatacgggaggaaaggaag
gaccctctctcagcactagcaagagaatatggaggatcaaagaggaatgccttattgaag
tggtgccagaagaaaacagaaggctaccagaatatcgacatcacaaacttcagcagcagc
tggaacgatgggctggccttctgcgcactcttgcacacctatcttcctgcccacattcca
tatcaagaactgaacagccaggataagaaaaggaacttcaccctagccttccaggcggct
gaaagtgtcgggatcaaatctaccctggacattaatgagatggtacggaccgagcggcca
gattggcaaaatgtgatgctgtatgtgactgccatctacaagtactttgaaacctga
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