Perognathus longimembris pacificus (Pacific pocket mouse): 125349552
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Entry
125349552 CDS
T08928
Symbol
Cul5
Name
(RefSeq) cullin-5
KO
K10612
cullin 5
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04120
Ubiquitin mediated proteolysis
plop05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125349552 (Cul5)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
125349552 (Cul5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125349552 (Cul5)
03400 DNA repair and recombination proteins [BR:
plop03400
]
125349552 (Cul5)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Cullin
125349552 (Cul5)
DNA repair and recombination proteins [BR:
plop03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
125349552 (Cul5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_AB
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
125349552
NCBI-ProteinID:
XP_048199743
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All DBs
Position
3:110939056..110984464
Genome browser
AA seq
780 aa
AA seq
DB search
MATSNLLKNKGSLQFEDKWDFMRPIVLKLLRQESVTKQQWFDLFSDVHAVCLWDDKGPGK
IHQALKEDILEFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEITLLG
KQNSNKKSNMEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGV
RESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKE
EEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLM
DKVLNGIEPMLKDLEEHIISAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQ
DDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTP
LSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWL
REVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSS
EKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQL
AVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKDF
TEGTLFSVNQEFSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAII
QIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYMA
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtctaatctgttaaagaataaaggttctcttcagtttgaagacaaatgggat
ttcatgcgtcctattgttttgaagcttttacgacaggaatctgttacaaaacaacagtgg
tttgatctgttttcggatgtgcatgcagtctgtctctgggatgataaaggcccaggaaaa
attcatcaggctttaaaagaagatatccttgagtttattaagcaagcacaggcacgcgtc
ctgagccatcaagatgacacagctttgctaaaggcttatattgttgagtggcggaaattc
tttacacaatgtgatattttaccaaaacctttttgtcaactagagattactttgctgggc
aaacagaacagcaacaaaaaatcaaatatggaagatagcattgttcgaaagcttatgctt
gacacatggaatgaatccattttttcaaatataaaaaatagacttcaagacagtgccatg
aagctggttcatgcagaaagattaggggaagcttttgattctcagctggtcattggagta
agagaatcctatgttaacctttgttctaatcctgaggataagcttcagatttatagggac
aattttgagaaggcatacttggactcaacagagagattttatagaacacaagcaccctca
tatttacaacaaaatggtgtgcagaattacatgaaatatgcagatgctaaattaaaagaa
gaagaaaaacgagcattacgctatttagaaacaagacgagaatgtaactctgttgaagca
ctcatggaatgctgtgtaaatgccctggtgacatcatttaaagagactatcttagcagaa
tgccaaggcatgatcaaacgaaatgaaactgaaaagttacatttgatgttttcattgatg
gacaaagttctgaatgggatagagccaatgttgaaagacttggaggaacatatcattagt
gctggcctggcagatatggtagcagctgctgaaactattactactgactctgagaaatat
gttgagcagttacttacattatttaatagatttagtaaacttgtcaaagaagcttttcaa
gatgatccacgatttctcactgccagagataaggcatataaagcagttgttaatgatgct
accatatttaaacttgaacttccattgaagcagaaaggagtgggattgaaaactcaacct
gaatccaaatgccctgagttacttgccaattactgtgacatgttgctgagaaaaacacca
ttaagcaaaaaactaacctcggaagaaattgaagcaaagcttaaagaagtgcttttggta
cttaaatacgtacaaaacaaagatgtttttatgaggtatcacaaagctcatttgacacga
cgtcttatattagacatctctgctgatagtgaaattgaagaaaatatggtagagtggcta
agagaagttggtatgccagcagattatgtaaacaagcttgctagaatgtttcaggatata
aaagtatctgaagatctgaaccaagcttttaaggaaatgcacaaaaataataaattggcc
ttaccagctgactcagttaatatcaaaatcctgaatgctggtgcctggtctagaagttct
gagaaagtctttgtctcacttcctactgaactggaagatttgattcctgaagtagaagaa
ttttacaaaaaaaatcatagtggtaggaaattacactggcatcatctcatgtcaaatgga
attataacatttaagaatgaagtaggtcagtatgacttggaggtgaccacatttcagctg
gctgtgttgtttgcatggaaccaaagacccagagagaaaatcagctttgaaaatctaaaa
cttgcaactgaactcccagatgctgaacttagaaggactttatggtctttagtagctttt
ccgaagctcaaacggcaagttttattgtatgaacctcaagtcaactcacccaaagatttt
acagaaggtaccctcttctcagtgaaccaggagttcagtttaataaaaaatgcaaaagtt
cagaaaaggggtaaaatcaacttaattggacgcttacagctaactacagaaagaatgaga
gaagaggagaatgaaggaatagttcagctaagaatattaaggacccaggaagccatcata
caaataatgaaaatgagaaagaaaattagtaatgctcagctgcagactgaattagtagaa
attttgaaaaacatgttcttgccacaaaagaaaatgataaaagaacaaatagaatggcta
atagagcacaagtacatcagaagagatgaatcagacatcaacactttcatatacatggca
tag
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