Perognathus longimembris pacificus (Pacific pocket mouse): 125349678
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Entry
125349678 CDS
T08928
Symbol
Trub2
Name
(RefSeq) mitochondrial mRNA pseudouridine synthase TRUB2
KO
K23497
mitochondrial mRNA pseudouridine synthase TRUB2 [EC:5.4.99.-]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
plop03029
]
125349678 (Trub2)
Mitochondrial biogenesis [BR:
plop03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
125349678 (Trub2)
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
T2SSM_b
Motif
Other DBs
NCBI-GeneID:
125349678
NCBI-ProteinID:
XP_048199995
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Position
1:complement(156656904..156667980)
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AA seq
323 aa
AA seq
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MGSAGLARLHGLFAVYKPPGLKWLHLRDTVEMQLLKGLNAGKPPPPEQRVRFLLGPVEDS
EEKQLTLTATSVPTLTNHRLVCGPEFLRLKIGVGHRLDTRSSGVLVLGVGHGCRLLTDMY
DAHLTKDYTVRGLLGKATDDFCEDGRLVEKTTYDHVTREKLDRILSVVQGSHQKALVMYS
NLDLQSQEAYEMAVRGMIRPMSKSPMLITGIRCLNFAPPEFLLEVQCMHETQQQLRKLVH
EIGLELKTTAVCTQVRRTRDGFFTLDDALLRTQWNLQSVQDAIRAAAPRVTEQLEKNSKP
RLGTSLLPSPDQPGDDSKSYLGH
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggggtccgcgggcctggcgcgcctgcatgggcttttcgcggtgtataagcccccggga
ctgaaatggctgcacctgagagatactgtggaaatgcagcttctgaaaggcctcaatgcc
gggaaacctcctcctcctgaacagcgtgttcgctttttgctgggtcctgtggaagacagt
gaagagaaacagctgacgctcacagccaccagtgtgcccacgctcaccaaccacaggttg
gtatgtggaccagaattcctcagactgaagattggcgtgggacaccggctggatacccgg
tcttctggggtgcttgtgctcggcgtgggacacggatgcagactcctcaccgacatgtat
gatgctcaccttaccaaggattatacagtgcgaggccttctgggcaaagccacggatgat
ttctgtgaggatgggcgcctggtggagaagacaacgtacgaccatgtgactagagagaag
ctggaccggatcctgtctgtggtccaaggctcccatcagaaggccctggtgatgtactcc
aacttagacctgcagtcccaggaagcctacgagatggcggtgagaggcatgatccggccc
atgagcaagtctcccatgctcattactggcatccggtgcctgaactttgcacctccagag
ttcctcttagaggtgcagtgtatgcacgagacacagcagcagctacgaaagctagttcat
gaaattggccttgagctgaagaccacagctgtgtgcacacaagtgcggcgcacgcgggat
ggtttcttcaccctggatgatgctcttctgaggacccagtggaacttacagagcgtccaa
gatgccatcagagccgcagctcctcgggtgacagaacagctagagaagaactcaaagcca
agattaggtacttcgctactccctagtcctgaccagcctggggatgactctaagagctat
ttgggccactga
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