Perognathus longimembris pacificus (Pacific pocket mouse): 125349681
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Entry
125349681 CDS
T08928
Name
(RefSeq) stromelysin-1-like
KO
K01394
matrix metalloproteinase-3 (stromelysin 1, progelatinase) [EC:
3.4.24.17
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04657
IL-17 signaling pathway
plop04668
TNF signaling pathway
plop05171
Coronavirus disease - COVID-19
plop05202
Transcriptional misregulation in cancer
plop05215
Prostate cancer
plop05323
Rheumatoid arthritis
plop05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
125349681
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
125349681
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
125349681
09162 Cancer: specific types
05215 Prostate cancer
125349681
09172 Infectious disease: viral
05171 Coronavirus disease - COVID-19
125349681
09163 Immune disease
05323 Rheumatoid arthritis
125349681
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
125349681
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
plop01002
]
125349681
Enzymes [BR:
plop01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.17 stromelysin 1
125349681
Peptidases and inhibitors [BR:
plop01002
]
Metallo peptidases
Family M10
125349681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Astacin
DUF4953
Reprolysin_3
Reprolysin_4
Reprolysin_5
Motif
Other DBs
NCBI-GeneID:
125349681
NCBI-ProteinID:
XP_048199994
LinkDB
All DBs
Position
3:120518195..120528615
Genome browser
AA seq
475 aa
AA seq
DB search
MKSLPVVLFLCVGVGSGYPLEGPARSEEGSMELVQQYLENYYNLEKDAKQFVKRKDSRPV
VKKIQEMQKFLGLEVTGQLDSPTMRMMGRPRCGVPDVGDFTTFPGTPKWEKHHLTYRIVN
YTPDLPRHAVDSAIAKALSAWAEVTPLTFSRKDEGEADIMISFAVGEHGDFSPFDGPGMV
LAHAYAPGPGIHGDAHFDDDERWTDDTRVGTNLFLVAAHELGHSLGLFHSANTEALMFPV
YKSFTDLATFRLSQDDVNGIQSLYGPSLSSAEPPRGPSPPEPATPAKCDPALSFDAVCTL
RGEILFFKDRHFWRQSLRTIEPGFHLISSFWPSLPSSIDAAYEVASRDTVFIFKGRKFWA
IRGHEAQAGYPRSIHALGFPATVEKIDAAISDKEKKKTFFFVEDKYWSYDEKRQSMEPGF
PRKTAEHFPGVDGTVDAAFEQFGFYYFFSGSSQLEFDPNAKKVTHILKSTTWFHC
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtcttccagtcgtgctgttcctatgtgtgggagttggctccgggtacccactg
gagggacctgcaaggagcgaggaaggaagcatggagcttgttcagcaatacctagaaaac
tactacaaccttgaaaaagatgccaaacagtttgtgaaaagaaaggacagtcgtcccgtg
gttaaaaaaatccaagaaatgcagaagttcctggggttggaggtgaccgggcagctggac
tcccccaccatgaggatgatgggcaggcccaggtgcggcgttcccgacgtgggcgacttc
accacctttcccggcaccccaaagtgggagaaacatcaccttacctacaggatcgtgaat
tacacgcccgatttgccaagacacgcggtggattctgccatcgcgaaggcgctgagcgcc
tgggccgaggtgactccactcacgttctccaggaaggacgagggagaggctgacatcatg
atatcctttgccgttggagaacacggggacttcagcccttttgatggacctggaatggtt
ttggctcacgcctatgcccctgggccaggcattcatggcgatgctcactttgatgatgat
gagagatggactgatgatacaagagtagggaccaatttatttctggttgctgctcatgaa
cttggccactctctgggcctcttccactcagccaacactgaagctctgatgttccccgtc
tacaagtccttcaccgacctggccacgttccgcctttcccaggatgatgtgaatggcatc
cagtctctctacgggccttcgctgtcctccgctgagcccccccgggggcccagccccccg
gaacctgccaccccagccaagtgtgaccctgctctgtccttcgatgcagtgtgcaccctg
aggggagaaatcttgttctttaaagacaggcatttctggcgtcagtctctcagaaccatt
gagcctggatttcatctgatctcttcattttggccatcccttccttcaagcatagacgct
gcgtatgaagttgccagcagggacacggtcttcatttttaaaggccgtaagttctgggcc
atccgcggccatgaggcacaggctgggtacccgagaagcatccacgccctgggtttccca
gcgactgtggagaaaatcgatgcagccatttccgacaaggagaaaaagaaaacattcttc
ttcgtggaggacaaatactggagctatgacgagaagagacagtccatggagccaggcttt
cccaggaagacagccgagcacttcccaggggtggacggcacagtggacgctgcctttgaa
cagtttggattttactatttcttcagtgggtcttcacagttggagtttgacccaaatgca
aagaaggtgacgcacattttgaagagtaccacctggttccattgttag
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