Perognathus longimembris pacificus (Pacific pocket mouse): 125349978
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Entry
125349978 CDS
T08928
Symbol
Chrna1
Name
(RefSeq) acetylcholine receptor subunit alpha isoform X1
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
plop04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
125349978 (Chrna1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125349978 (Chrna1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
plop04040
]
125349978 (Chrna1)
Ion channels [BR:
plop04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
125349978 (Chrna1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Claudin_2
DUF4980
Motif
Other DBs
NCBI-GeneID:
125349978
NCBI-ProteinID:
XP_048200189
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Position
4:49498996..49515804
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AA seq
476 aa
AA seq
DB search
MEPLPLLLLLGLCSVSHINGVSTMLPLCLLSFTAGLVLGSEHETRLVAKLFENYSSVVRP
VEDHRQAVEVTVGLQLIQLISVDEVNQIVTTNVRLKQQWVDYNLKWNPDDYGGVKKIHIP
SEKIWRPDLVLYNNANGDFAIVKFTKVLLDYTGHITWTPPAIFKSYCEILVTHFPFDEQN
CSMKLGTWSYDGSVVTIYPESDQPDLSNFMESGEWVIKESRGWKHWVFYSCCPNTPYLDI
TYHFVMQRLPLYFIVNVIIPCLLFSFLTSLVFYLPTDSGEKMTLSISVLLSLTVFLLVIV
ELIPSTSSAVPLIGKYMLFTMVFVIASIIITVIVINTHHRSPSTHIMPEWVRKVFIDTIP
NVMFFSTMKRPSRDKQEKKIFTEDIDISDISGKPGPPPLGFHSPLIKHPEVKSAIEGVKY
IAETMKSDQESNNAAEEWKYVAMVMDHILLGVFMLVCLIGTLAVFAGRLIELNQQG
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggagcccctgcctcttctcctgctccttggcctctgctcagtgtctcatataaatgga
gtcagcaccatgctgccgctatgcttgctgtctttcacagctggcctcgttctgggctct
gaacatgagacccgtctggtggcaaagctatttgagaactacagcagcgtggtgcggcca
gtggaggatcaccgccaagctgtggaggtcaccgtgggcctgcagctgatacagctcatc
agcgtggatgaagtaaatcaaatcgtgacaaccaatgtgcgtctgaaacagcaatgggtg
gattacaacctaaaatggaatccagatgactatggtggtgtgaaaaaaattcacattccc
tcagaaaagatctggcggccagaccttgttctctacaacaatgcaaatggtgactttgcc
attgtcaagttcaccaaagtgctgctggactacaccggccacattacgtggacacctcca
gccatctttaaaagctactgtgagatccttgtcacccactttccatttgatgagcagaac
tgcagcatgaagctgggcacctggtcctatgatggctctgtggtgacaatctacccggaa
agtgaccagccagacctgagcaacttcatggagagcggggaatgggtgatcaaggagtcc
cggggctggaagcactgggtgttctattcctgctgccccaacaccccatacctagacatc
acctaccacttcgtcatgcaacgcctgcctctctacttcatcgtcaacgtcatcattccc
tgcctgctcttctccttcctaaccagtctggtgttctacctacccacagactcaggggag
aagatgacactgagcatctctgtcttactgtcattgactgtgttcctgctggtcattgtg
gagctgatcccctccacctccagtgctgtgcccttgattgggaaatatatgttgttcacc
atggtgtttgtcatcgcgtccatcattatcaccgtcattgtcatcaacacacaccaccgc
tctcctagcacccacatcatgcccgagtgggtgcgaaaggtttttatcgacactatcccg
aatgtcatgtttttctccacaatgaaaagaccatcaagagacaaacaagagaaaaaaatt
ttcaccgaagacatcgatatttctgacatctctgggaagcctgggcctccccccctggga
ttccactctccactaattaaacaccctgaggtgaaaagtgccatcgaaggtgtcaaatac
atcgcagagaccatgaagtcagaccaggagtccaataatgcggcggaggagtggaagtac
gtcgcaatggtaatggaccacattctccttggggtcttcatgcttgtctgtctcatcgga
accctggctgtgtttgcaggccggctcattgaactgaatcagcaaggatga
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