Perognathus longimembris pacificus (Pacific pocket mouse): 125350120
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Entry
125350120 CDS
T08928
Symbol
Sned1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1 isoform X1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
plop04990
]
125350120 (Sned1)
Domain-containing proteins not elsewhere classified [BR:
plop04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
125350120 (Sned1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
NIDO
EGF_TEN
fn3
EGF_2
EGF_CA
EGF_Teneurin
cEGF
Motif
Other DBs
NCBI-GeneID:
125350120
NCBI-ProteinID:
XP_048200324
LinkDB
All DBs
Position
4:complement(659931..737819)
Genome browser
AA seq
1413 aa
AA seq
DB search
MRRGAAWALLLAWALALGARGARGAVALADFYPFGPERGDALTPKQDDGGSGLRPLSVPF
PFFGAEHPGLYVNNNGVISFLKEVSQFTPVAFPIAKDRCVVAAFWADVDNRRAGDVYYRE
ATDPATLRRATEDIRHYFPELLDFSATWVFVATWYRVTFFGGSASSPVNTFQTVLITDGK
FSFTIFNYESISWTTGTHASSGGDAAGLGGIAAQAGFNAGDGQRYFNIPGSRTVDMAHVE
STTNVGVPGRWAFRIDDAQVRVGGCGHTTSVCLALRPCLNGGKCIDDCITGNPSYTCSCL
AGFTGRRCHLDVNECTSHPCQNGGICTHGINSFSCQCPEGFQGPTCESARSPCDDKVCQN
GGQCQADSSSAVCVCRAGYTGAACETDVDECGSDPCLNGGSCVDLVGNYTCVCAEPFEGP
RCETGNAPTPEACLSAPCQNGGTCVDADRGYVCECPEGFMGLDCRERTPNDCECRNGGRC
LGTNVTLCQCPPGFFGLLCEFEVTAMPCSMNTQCPDGGHCMEYGGSYLCVCHTDHSASHS
PPSPCDSDPCFNGGSCAAHEDSYTCECPRGFHGRHCEKARPHLCNSGPCRNGGTCKEIGS
EYHCTCPYRFTGRHCEIGKPDSCASGPCHNGGTCFHYIGKYKCDCPPGFSGRHCEIAPSP
CFRSPCMNRGTCEDLGMDFSCHCPPGFTGHRCQTEVDCGRPEEVQHATVRFNGTRVGSVA
LYTCDRGYSLNAPSHAHVCQPQGVWSQPPQCLEVDECRSQPCLHGGSCQDHTAGYLCLCG
PGYEGAHCELETDECRSQPCKHGGVCRDLPGAFFCQCPVGFSGNHCETEVDSCHSSPCQH
GGRCQEGGGAYLCVCPEGFFGYHCETVSDPCVSSPCGGHGYCLASNGSHSCTCKVGYTGK
DCTKELLPPTALRVERVEESGVSISWSPPEGSAARQVLDGYAVTYASADGSFRRTDFVDR
SRSSHQLRALAAGRAYNISIFSVKRNTNNKNDISRPAVLLARTRPRPIEDFEVTNVTANA
ISVRWALHRIHHATVSRVRVSILHPEAPEPQATEVDKGVDQLTFGDLLPGRRYTVRMTAL
SGPGGAERPTESLASGPLHVWTRPLPPANLTASRVTATSAHVVWDAPAPGASLEAYVINV
TTSQSTKSRYVPNGKLGSYTVRDLLPGRRHRLSVTTVQSAERGQLHSEPAHLYIITSPRD
GADRRWHQGGHHPRVLRNRPPPARLPELRLLSDHSVPEMPTQPPRFSELVDGRGRVSARF
GGSPSKAIGVGSQPTTLVPLKNMEDAPEQARLALQLPERSEKDKGSRSESVPGGCSEDAC
QNGGTCVPGGTTHSCDCGPGFKGRRCELACEKVPRPCTRLFSETKSFPVWEGGVCHYVYK
RVYRVHQDICFKERCEGTSLEKPHTGNKVTVKH
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgcggcgcggcctgggcgctgctgctggcctgggccctggcgctcggggcgcgc
ggggcgcggggcgccgtggccctggccgacttctacccgttcggcccggagcgcggcgac
gccctcaccccgaagcaggacgacggcggctcggggctgcggccgctctccgtgcccttc
ccgttcttcggcgccgagcaccccggactctacgtgaacaataacggggtcatctccttt
ctgaaggaggtctctcagttcacccccgtggccttccccattgccaaggaccgctgtgtg
gtggcagccttctgggcagatgtggacaacaggcgagcaggcgatgtctactaccgggag
gccacggacccggccacactgcgcagagccacggaagacatcagacactacttccccgag
ctcctggacttctctgcaacctgggtgtttgtggccacgtggtaccgagtgacctttttt
ggaggcagtgcctcctccccggtcaacactttccaaactgtgctcatcactgacggcaag
ttctccttcaccatcttcaactacgagtccatatcctggaccaccggcacccacgccagc
agcgggggtgatgccgccggcctggggggcattgcagcccaggcaggcttcaacgcgggc
gacgggcagcgctacttcaacatccccggctcgcgcaccgtggacatggcccacgtggag
agcaccaccaacgtgggcgtgccggggcgctgggcgttcagaatcgatgatgcccaggtg
cgcgtggggggctgcggccatacaacctccgtgtgcctggccctgcgcccatgcctcaat
ggcggcaagtgcatcgatgactgcatcacaggcaacccctcctacacctgctcctgtctc
gctggcttcacggggcggaggtgccacctggatgtgaacgagtgtacctcccacccgtgt
cagaatggcgggatctgcacccatgggatcaacagcttcagctgtcagtgcccagagggc
ttccaggggcccacctgtgagtcagcccggtccccgtgcgacgataaggtgtgtcaaaat
ggcggccagtgccaggcagacagcagctctgcggtgtgtgtgtgccgggcggggtacacc
ggagccgcctgtgagacagatgtggatgagtgcggctctgacccgtgcctgaacggaggc
tcctgcgtggacctggtggggaactacacctgcgtgtgtgcagagcccttcgaggggcct
cgctgtgagacaggaaacgcccccacgcccgaggcctgcctctcggccccctgtcagaac
gggggaacctgtgtggatgcggaccggggctacgtgtgcgaatgccccgagggcttcatg
ggcctggactgcagagagcgaaccccgaatgactgtgaatgccggaacggaggccggtgc
ctaggcaccaacgtcaccctctgccagtgcccccctgggttctttgggctcctgtgtgaa
tttgaagtcacagccatgccctgcagcatgaacacccagtgtccggacggaggccactgc
atggagtacggagggagctacctgtgcgtctgccacaccgaccacagcgccagccactcc
ccgccatcgccctgcgactccgacccctgcttcaacggaggctcctgcgccgcccacgag
gactcctacacctgcgagtgcccgcgcggcttccacggccggcactgcgagaaagcccgg
ccacacctgtgcaactctgggccttgccggaacgggggcacgtgcaaagaaataggcagc
gagtaccactgcacctgcccataccgcttcaccgggaggcactgcgaaatcgggaagcca
gactcctgtgcctccggcccttgccacaatggtggcacttgcttccactacattggcaaa
tacaagtgtgactgccctccgggcttctctggaaggcactgtgagatcgccccctccccc
tgcttccggagcccatgcatgaacaggggcacctgtgaggatctgggcatggatttctct
tgccactgtcctccagggttcacaggacacaggtgccagacagaggtggactgcggacgc
cccgaggaggtgcagcatgccacggtgcgcttcaatgggactcgcgtgggctccgtggcc
ctgtatacatgtgaccgtggctacagcctgaatgcccccagccacgcccatgtctgccag
ccccagggcgtctggagccagcctccccagtgcctcgaagtagatgagtgccgttctcag
ccatgcttgcacgggggctcctgccaggaccacaccgctgggtacctgtgcctctgcggc
cctgggtacgaaggagcccactgcgagctggagacagatgaatgtcgctcacagccctgc
aagcatggaggtgtgtgcagagacctccctggggccttcttctgccagtgccctgtgggc
ttttctggaaaccactgtgagacagaggtggactcctgccactccagcccctgccagcat
ggaggccggtgccaggaaggcggcggggcctacctgtgtgtctgtccagagggcttcttt
ggctaccactgtgagacagtgagtgacccctgcgtctccagcccctgtgggggccatggc
tactgcctggccagcaacgggtcccacagctgcacctgcaaagtgggctacacgggcaag
gactgcactaaagagctcctcccaccaacagccctcagggtggagagagtggaggagagc
ggggtctccatctcctggagcccacccgaaggctccgccgccaggcaggtgctggatggc
tacgcggtcacctacgcctcggcggacggctccttccgccgcacggacttcgtggaccgc
agccgctcctcgcaccagctgcgggccctggcggccggccgggcctacaacatctccatc
ttctccgtcaagcgcaacaccaacaacaagaatgacatcagcaggcctgctgtgctgctg
gcccgcacacgaccccgccctattgaggacttcgaggtgaccaacgtgacagccaatgcg
atttccgtgaggtgggccctgcacaggatccaccacgccactgtcagccgagtgcgcgtg
tccatcctccatccagaggcccccgagccccaggccactgaggtggacaagggcgtggac
cagctcacgttcggggacctgctgccaggaagaaggtacaccgtgcggatgacggccctc
agtgggcctggaggagcagagcgtcccaccgagagcctggcgtcaggacccttgcacgtg
tggacccggccactgcctcccgcaaacctgactgcctcccgagtcacggccacctctgct
cacgtggtctgggacgcgcctgctccaggcgcctcgctggaggcttatgtcatcaacgtg
accaccagccagagcaccaagagccgctacgtccccaacgggaagctggggtcctacacc
gtgcgggacctgctgccgggacggcggcaccggctctcggtgaccaccgtgcagagcgcc
gagcggggccagctgcacagcgagcccgcgcacctctacatcatcacctcccccagggat
ggtgctgacagacgctggcaccagggcggacaccacccgcgggtgctcagaaatagacca
ccccctgcacgcctgccagagctgcgcctgctcagtgaccacagtgtccccgagatgccc
acccagccacccagattctcggagctggtggacggaagaggaagagtgagcgctaggttt
ggcggctctcccagcaaagccatcggggtgggatcacagcccaccacactggtgccactc
aagaacatggaggacgcccctgagcaggcccgcctggccctccagcttcccgagcgcagc
gagaaggacaagggcagtcggtcagaaagtgttcctgggggctgttcagaagatgcctgt
cagaacggaggcacctgtgtgccaggtggcactacccacagctgtgactgtgggcctggc
ttcaaaggcaggcgctgtgagctcgcttgtgagaaggtgccccgcccctgcacacggctg
ttctcggagaccaagtcctttcctgtctgggaaggaggcgtctgccattatgtgtataag
cgagtctacagagttcaccaggacatctgcttcaaagagcgctgtgaaggcacaagcctg
gagaaaccccacacaggaaacaaagtaacagtcaaacactga
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