Perognathus longimembris pacificus (Pacific pocket mouse): 125350137
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Entry
125350137 CDS
T08928
Symbol
Hdac4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04371
Apelin signaling pathway
plop04613
Neutrophil extracellular trap formation
plop05034
Alcoholism
plop05203
Viral carcinogenesis
plop05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
125350137 (Hdac4)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
125350137 (Hdac4)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
125350137 (Hdac4)
05203 Viral carcinogenesis
125350137 (Hdac4)
09165 Substance dependence
05034 Alcoholism
125350137 (Hdac4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plop03036
]
125350137 (Hdac4)
Enzymes [BR:
plop01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
125350137 (Hdac4)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
125350137 (Hdac4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
TFIIA
Motif
Other DBs
NCBI-GeneID:
125350137
NCBI-ProteinID:
XP_048200361
LinkDB
All DBs
Position
4:1560934..1781429
Genome browser
AA seq
1089 aa
AA seq
DB search
MSSQSHPDGLSGRDQPLELLNPARVNHMPSTVDVATALPLQAAPAAVPMDLRLDHPFPLP
VAEPALREQQLQQELLALKQKQQIQRQILIAEFQRQHEQLSRQHEAQLHEHIKQQQEMLA
MKHQQELLEHQRKLERHRQEQELEKQHREQKLQQLKNKEKGKESAVASTEVKMKLQEFVL
NKKKALAHRSLNHCISSDPRYWYGKTQHSSLDQSSPPQSGVSASYNHPVLGMYDAKDDFP
LRKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVVTALKKRPLDVTDSACSSAPGSGP
SSPNSSSGNVSTENGIAPAVPSVPAETSLAHRLVTREGSVAPLPLYTSPSLPNITLGLPA
TGPSAGAASPPDAERLALPALQQRLSLFPGTHLAPFLSASPLEREAGAPHSPLLPHMVLL
EPPPAQTPLVTDWYLSGLGALPLHAQSLVSADRVSPSIHKLRQHRPLGRTQSAPLPQNAQ
ALQHLVIQQQHQQFLEKHKQQFQQQQLHLSKMIPKPSEPGRQPESHPEETEEELREHQAL
LDEPFLDRLPGQKEAHTLAGVQVKQEPIESDEEEAESVREAEQGQRPPTEQELLFRQQAL
LLEQQRIHQLRNFQASMEAAGIPVSFGGHRPLSRAQSSPASATFPLPVQEPPAKPRFTTG
LVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRSKCECIRGRKATLEELQTVH
SEAHALLYGTNPLNRQKLDSKKLLGSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAARLAV
GCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQLRLNVSKIL
IVDWDVHHGNGTQQAFYSDPNVLYVSLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFT
GGLDPPMGDTEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGY
LTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELEPLPEKVVQQRPNTNAVR
SMEKVMEVHSKYWRCLPRLASTVGHSLIEAQKCENEEAETVTAMASLSVGVKPAEKRPDE
EPMEEEPPL
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccaaagccatccagatggactttctggccgagaccagccactggagctgctg
aaccccgcccgcgtgaaccacatgcccagcacagtggacgtggccaccgcgctgcctttg
caagcagcccccgcggccgtgcccatggacctgcgcctggaccacccgttcccgctgccc
gtggcagagccggccctgcgggagcagcagctgcagcaggagctcctggccctgaagcag
aagcagcagatccagcggcagatcctcatcgccgagttccagcggcagcacgagcagctc
tcgcggcagcacgaagcccagctgcacgagcacatcaagcagcagcaggagatgctggcc
atgaagcaccagcaggagctgctggagcaccagcgcaagctggagcggcaccgccaggag
caggagctggagaagcagcaccgcgagcagaaactgcagcagctcaagaacaaggagaag
ggcaaagagagtgccgtggccagcacagaggtgaagatgaaactgcaggagtttgtcctc
aacaagaagaaagccctcgcccaccggagcctgaaccactgcatctccagcgacccccgc
tactggtacgggaagacacagcacagctccctggaccagagctcacctccccagagtggg
gtgtcagcttcctacaaccacccagtcctgggcatgtacgacgccaaagatgacttcccc
cttaggaaaacagcttctgaacccaacctgaaactgaggtccaggctcaagcagaaagtg
gccgagaggcggagcagccccctgttacgcaggaaggacgggcctgtggtcactgctctc
aaaaagcgtcccctggatgtcacagactctgcgtgcagcagcgctccgggctccggaccc
agctcgcccaatagcagctctggcaacgtcagcaccgagaacggcatcgcgcccgcagtg
cccagcgtcccagccgagaccagcctggcgcacagacttgtgactcgggaaggctccgtc
gccccgctccctctctacacgtcgccatccttgcccaatatcaccttaggacttcctgcc
accggcccctcagccggtgcggccagcccgccggacgccgagagactggcgctgccagcc
ctccagcagcggctctccctgttccccggcacccacctggccccgttcctgagcgcctcg
cccctggagcgggaggccggggcgcctcacagcccgctgctgccgcacatggtcctgctg
gagccgccccccgcgcagacgccgctcgtcacagactggtatctttcaggcctgggggcc
ttgcccctccacgcacagtccctggtgagcgcggaccgcgtgtccccgtccatccacaag
ctgcggcagcaccgcccactggggcgcacgcagtcagcacccctgccacagaacgctcag
gctctgcagcacctggtcatccagcagcagcaccagcagttcctggagaagcacaagcag
cagttccagcagcagcagctgcacctcagcaagatgatccccaaaccaagtgagccaggc
cggcagcccgagagccatcccgaggagacggaggaggagctccgcgagcaccaggccctg
ctggatgagcccttcctggaccggctccccgggcagaaggaggcacacacgttggccggc
gtccaggtgaagcaggaacccatcgagagtgatgaagaggaggcagagtcggtgcgggag
gcagagcaaggccagcgcccgcccacggagcaggagctgctcttcagacagcaagccctc
ctgctggagcagcagcggatccatcagctgaggaacttccaggcgtccatggaggctgcg
ggcatccccgtgtcattcggcggccacaggcctctgtcccgggcacagtcgtccccagca
tcggccaccttccccctgccggtccaggagcctcccgccaagccgaggttcaccacgggc
ctagtgtacgacacgctgatgctaaagcaccagtgcacctgcgggaacaccaacagccac
cctgagcacgctgggaggatccagagcatctggtcccgcctgcaggagacaggcctgcgc
agcaagtgcgagtgtatccgcggacggaaggccacgctggaggagctgcagactgtgcac
tccgaggcccacgcactgctctacggcacaaaccccctcaacaggcagaaactggacagt
aagaaacttctagggtcgctgacctccgtgtttgtcaggcttccttgcggtggagtcggg
gtggacagcgacaccatttggaacgaggtgcactcgtcgggggcggcccgtcttgccgtg
ggctgcgtggtggagttggtcttcaaggtggccacaggggagctgaagaacggctttgct
gtggtccgccccccaggacaccacgctgaggagagcacccccatggggttttgctacttc
aactcagtggcagttgcagccaaacttctccagctgaggctgaatgtgagcaagatcctc
atcgtggactgggatgtgcaccacgggaacggaacccagcaagctttctacagcgacccc
aacgtcctctacgtgtccctgcaccgctacgacgacgggaacttctttccgggcagcgga
gcgcctgacgaggtgggcacggggccaggcgtgggcttcaatgtcaacatggctttcacg
ggcggcctggacccccccatgggagacacagagtacttggcagccttcagaacggtggtc
atgcccatcgccaacgagtttgccccggatgtggtgctggtgtcgtcgggcttcgacgct
gtggagggccacccgacgcccctcggggggtacaacctgtctgccaaatgcttcgggtac
ctgacgaagcagctgatgggcctggcgggcggccggatcgtcctggccctcgagggcggc
cacgacctgacggccatctgcgacgcctccgaagcgtgcgtctctgctctgctgggaaat
gagctcgagcctctgccggaaaaggttgtgcagcagagacccaacaccaacgcggtccgc
tccatggagaaggtcatggaggtccacagcaagtactggcgctgcctgccgcgcctggcc
tccaccgtgggacactccctgatcgaggcgcagaagtgcgagaacgaggaggccgagacg
gtcaccgccatggcctcgctgtcggtgggcgtgaagccggccgagaagaggccggacgag
gagcccatggaggaggagcccccgctgtag
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integrated database retrieval system
