Perognathus longimembris pacificus (Pacific pocket mouse): 125350248
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Entry
125350248 CDS
T08928
Symbol
Cul3
Name
(RefSeq) cullin-3 isoform X1
KO
K03869
cullin 3
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04120
Ubiquitin mediated proteolysis
plop04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125350248 (Cul3)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
125350248 (Cul3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125350248 (Cul3)
03400 DNA repair and recombination proteins [BR:
plop03400
]
125350248 (Cul3)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Cullin
125350248 (Cul3)
DNA repair and recombination proteins [BR:
plop03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
125350248 (Cul3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
RhgB_N
Stu2_CTS
DUF6655
WAC_Acf1_DNA_bd
Motif
Other DBs
NCBI-GeneID:
125350248
NCBI-ProteinID:
XP_048200611
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All DBs
Position
4:10700127..10780158
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AA seq
768 aa
AA seq
DB search
MSNLSKGTGSRKDTKMRIRAFPMTMDEKYVNSIWDLLKNAIQEIQRKNNSGLSFEELYRN
AYTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIR
DILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDR
GAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEAR
INEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMY
KLFSRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESF
NNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVETILDKAMVLFR
FMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSIS
NTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYL
AKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMT
ILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGHIFT
VNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHN
VLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatctgagcaaaggcacgggcagccggaaggacaccaagatgcggatccgggcc
tttccgatgaccatggatgaaaaatacgtaaacagcatttgggaccttctgaaaaatgca
attcaagaaatccagcgtaagaataacagtggtcttagttttgaggagctatatagaaat
gcatatacaatggttttgcataaacatggagaaaagctctacactggactaagagaagtt
gttaccgaacatctcataaataaggtgcgagaagatgtattaaattcattgaataacaac
tttcttcaaacactaaatcaagcttggaatgatcatcaaacagctatggtgatgattaga
gacatcttaatgtatatggaccgtgtatatgtacaacaaaataatgtggagaatgtctac
aatttgggattaattatttttcgagatcaagttgtgcgttatgggtgtattagagaccat
cttcgacaaactctattggatatgattgctagagaacgaaaaggagaagtcgtagacagg
ggcgcaataagaaatgcttgccagatgttaatgattttaggtcttgaaggaagatcagtc
tatgaagaagattttgaggctccttttttggaaatgtctgcagaatttttccagatggaa
agccagaaatttttagcagaaaacagtgcttcagtatatataaagaaagtagaagctaga
attaatgaagaaatagaacgggtaatgcactgccttgacaaatcaactgaagagcccatt
gtaaaggttgtggagagggagctcatttctaagcacatgaagactatagtagaaatggag
aactctggtctagtacatatgttgaaaaatgggaagacagaagaccttgcttgcatgtac
aagttatttagtcgtgtgccaaatggtttgaagacaatgtgtgaatgtatgagttcctat
ttgagggagcaaggtaaagcccttgtttctgaagaaggagaaggaaaaaatcctgttgac
tatatccagggtttattggatctgaagagtagatttgatcgcttcctccaggaatcgttc
aataatgaccggctctttaaacagactattgctggtgactttgagtattttctcaacctc
aactccaggtctcctgaatacctctcattatttattgatgataagctgaaaaagggagtc
aaagggctaacagaacaagaagtagaaactatattggataaggcaatggtcctttttagg
tttatgcaagaaaaagatgtatttgaacgttattataaacaacacctggcaaggagactg
ctcacaaataagagtgtttctgatgactctgagaagaatatgatatctaaattaaagact
gaatgtggatgtcagttcacatcaaaactggaaggaatgtttagggatatgagcatctca
aacacaactatggatgaattcaggcaacatctacaggcaactggggtttctttaggtggt
gttgaccttacagtacgggttctcacaacaggatactggcccactcaatcagccacacca
aagtgcaacatcccaccagcaccaagacatgcttttgagatatttagaaggttctactta
gccaaacacagtggtcgacagctcacactccagcatcatatgggttccgccgatctcaat
gccaccttttatggtccagttaaaaaggaagatggatctgaagttggtgttggaggtgca
caagttactggatctaatacacggaagcacatattgcaagtctccactttccagatgacc
atacttatgctctttaataatagagaaaaatacacatttgaggaaattcaacaggagaca
gatatccctgaaagagagcttgttagagccctacaatcccttgcctgtggtaaaccaaca
cagcgggttcttacaaaagaacctaagtctaaggaaatagaaaatggtcatatattcaca
gttaatgatcagttcacatccaaactacacagagtcaagatccaaacagttgctgccaaa
caaggtgaatctgacccagaaaggaaagaaacgaggcagaaagtagacgatgacagaaag
catgagatagaagctgctatagtgaggataatgaaatctagaaagaagatgcaacacaat
gtgttagtagcagaggtaactcaacagttaaaggctcgattcttaccaagtccagttgtt
attaagaaacgtattgaaggacttattgagagagaatatttggcacgaacacctgaggat
cgcaaagtatacacatacgtagcataa
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