Perognathus longimembris pacificus (Pacific pocket mouse): 125350296
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Entry
125350296 CDS
T08928
Symbol
Ttll4
Name
(RefSeq) LOW QUALITY PROTEIN: tubulin monoglutamylase TTLL4
KO
K16601
tubulin polyglutamylase TTLL4 [EC:
6.3.2.62
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
plop03037
]
125350296 (Ttll4)
04812 Cytoskeleton proteins [BR:
plop04812
]
125350296 (Ttll4)
Enzymes [BR:
plop01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.62 beta-tubulin-glutamate ligase
125350296 (Ttll4)
Cilium and associated proteins [BR:
plop03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
125350296 (Ttll4)
Cytoskeleton proteins [BR:
plop04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylases
125350296 (Ttll4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTL
ATPgrasp_YheCD
ATPgrasp_ST
Motif
Other DBs
NCBI-GeneID:
125350296
NCBI-ProteinID:
XP_048200698
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All DBs
Position
4:complement(15454657..15487937)
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AA seq
1168 aa
AA seq
DB search
MASAGTESYSIGFRRGANFKQSSPSGTVPALSPEKPSEGKIWSQTHQQVKPIWKLERKHV
GTLSTGLGQGLSAVPPQPAYYFCPSTLCSCGTTTVIAGHSNPCYLHSLPDLFSSTLLCRR
SNDRHKPYQQLESFCLRPNALEKRSCSLPPKGLPICLTAGKAASMVFPMAQPLASPPADP
YLSLAAAGENSSRKSLASAISGKIPSPPSSYKPMLNNNSFLRPNSTKVPLSPTTESLKPV
SSPKIQPVSWHHSGGTGDCVLQPGDHKMPQGIDTVLDDATPHITPPTPSALSISTASIAS
SQYKRNTNLISRTEPHLSSLNDNSDSQTLTKEVRFTEAVRKLTTKGYEKMPQQGCQFEQS
CVANPSFQWSLLNRSRRWKPVGGQRFPLEDAGSESRTPPGASDTLGLDSTVFCTKRISIH
LLASHTNGLNPSPACEFVPDPTPLEEDSASPIPPSPLLPLDVAEVTTCLCSFHLGQLGKK
PEEDKEPDPPARDSSSATNLQPDQLEVEDIEELVGGLEDCGSHDGNEEDEGDSECSSLSA
VSHSESVAVISRNCVEIVTKPLSNQEKVVRPALIYSLFPNVTPTIYFGTRDERVEKLPWE
QRKLLRWKMSTVTPNIVKQTIGRSHFKISKRNDDWLGCWGHHMKSPSFRSIREHQKLNHF
PGSFQIGRKDRLWRNLSRMQSRFGKKEFSFFPQSFILPQDAKLLRKVWESSSRQKWIVKP
PASARGIGIQVIHKWSQLPKRRPLLVQRYLHKPYLISGSKFDLRIYVYVTXYDPLRIYLF
SDGLVRFASCKYSPSMKSLGNKFMHLTNYSVNKKNAEYQANADETACQGHKWALKALWTY
LNQKGVNSDAIWEKIKDVVIKTIISSEPYVTNLLKMYVRRPYSCHELFGFDIMLDENLKP
WVLEVNISPSLHSNSPLDISIKGQMIRDLLNLAGFVLPNADDVISSSVSSGSFCSSSSSS
TSLPGSIRDKCRMSPEHFMAQKLKKAYYLTQKIPDQDFYASVLDILTPDDVRILVEMEDE
FSRRGQFERIFPSRISSRYLRFFEQPRYFNILTTQWEQKYHGNKLKGVDLLRNWCYKGFH
NGIVSESTPLWSLPTSLMTVSDSNRMLNTFSRPEPGQRGESTSSKDSEDTSRESSLSTQI
KYSGRTSRLSDSSTCQSPIDSLGTISPS
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagcaggaacagagagctacagtattggcttccgccggggagccaacttcaag
cagagcagtccctcaggcacagtgcctgccctatcacctgagaaaccctcagagggcaaa
atctggtctcagacccatcagcaggtgaagccaatctggaagctggagaggaagcacgtg
ggcacactgtcaacagggctgggccaaggcctctcagcggtgccaccacagccagcctat
tacttttgtcccagcactctatgtagttgtgggactacaactgtcattgcaggccacagc
aacccctgttacctgcattctcttccagacttgttcagtagtaccttgctgtgccgccgc
tccaacgatcggcacaaaccataccagcaactggagtctttttgcttgcgtccaaacgcc
ttagaaaaaagatcttgttcactccctcccaagggccttcctatctgtctcactgccggt
aaagctgcttccatggtcttccccatggcccagcccttggcatccccacccgcagacccg
tacctctcactggcagctgctggggaaaactcttcaaggaagagcttggcctctgccatc
tcagggaagatcccatctccaccatcatcctacaagcctatgctgaacaacaactccttc
ctgcggccaaacagcactaaagtgcctttatcgccgaccacagagagcctgaagccagta
tcctcacccaagatccagcctgtttcctggcatcattcggggggtactggagactgtgta
ctccagcctggtgaccacaagatgccccaaggcattgatactgtcctagacgatgctact
ccccacatcaccccacctacccccagtgctctcagcatttccaccgccagtattgcctct
tcccagtacaagcgcaacactaaccttatctccaggacagagccccatctctctagcctg
aacgacaactcggattcccagactctgactaaagaggttcggttcactgaagctgtgagg
aagttgactacaaaaggctacgagaagatgccacagcaaggttgccagtttgaacagtct
tgtgttgcaaaccctagtttccagtggagcctcctcaacaggagcaggcggtggaaacct
gtggggggccagcggtttcctctggaggatgctgggtctgagagtaggaccccccctggt
gcctcagacaccctgggattggacagtacagttttctgtactaaaaggattagcattcac
ctccttgcctcccacaccaatgggctcaaccccagccctgcctgtgagtttgtacctgac
cccacaccacttgaagaagatagtgcttcccccatccccccttctcctcttctgcccctt
gatgtagctgaagtgaccacctgcctctgttccttccatctgggccagcttgggaagaag
cctgaggaagataaggagccagatccacctgctagggattccagttcagctactaacctg
cagccagaccagcttgaggttgaagatatagaagaactagtaggtggtttagaagactgt
ggcagccacgatgggaatgaggaggacgagggagactctgagtgctcctcactaagtgct
gtctcccacagtgagtcggtggcagtgatctctcggaactgtgtggagattgtgaccaaa
cccctttccaatcaggagaaagttgtccgaccagccctcatctacagtctcttccccaac
gtgacccctaccatctattttggcactcgagatgagagagtggagaagcttccctgggaa
cagagaaagctgctccggtggaagatgagcacagtgaccccaaacattgtgaagcagacc
attggacggtctcacttcaaaatcagcaagagaaacgatgactggctaggttgctggggt
caccacatgaagtctcccagtttccgatccattcgagagcaccagaagctaaaccacttc
ccaggctccttccagattgggagaaaggaccggctgtggcggaacctgtctcgcatgcag
agccgatttggcaagaaggagttcagtttcttcccccagtcttttatcctgccccaggat
gccaagcttctgcgtaaagtctgggagagtagtagccgccaaaagtggattgtgaagcca
ccagcatcagctcgaggcattggcatccaggtcattcacaagtggagtcagctccccaaa
cgcaggcctctcctggtacagaggtatctgcacaaaccctacctcatcagtggcagcaag
tttgatctgcggatctatgtttacgtcaccntctatgatcctttgcgcatttacctcttt
tcagacggacttgtccgctttgccagttgcaagtattccccttccatgaagagccttggc
aacaagtttatgcacctgaccaactatagtgtcaataaaaagaatgccgagtaccaggcc
aatgctgatgaaacggcctgccagggccacaaatgggcactgaaggctttatggacctac
ctaaaccagaagggggtcaatagcgatgccatctgggagaagataaaagatgttgttatc
aaaaccattatctcgtcagagccctatgtaactaacttgctcaagatgtatgtgcggcgg
ccctatagttgccatgagctctttggttttgacatcatgcttgatgagaatcttaaaccc
tgggtcctggaagtcaacatttccccaagcctccactccaattctccactggacatcagc
atcaagggccagatgattcgtgacctcctgaatttagcaggcttcgttctacccaatgca
gacgatgtcatttccagctctgtcagctctggcagcttttgcagttccagcagctccagt
accagtctgcccggctctatcagggacaaatgtcgaatgagtcccgagcatttcatggca
cagaagttgaagaaagcctattatctgacccagaagattcctgaccaggatttctatgcg
tctgtgctggatattctgacgccagatgatgttcggattttggttgagatggaggatgag
ttttctcgccgtggtcaatttgaaagaatttttcccagtcgaatctcttctcgctatctc
cgcttttttgagcagccacgttatttcaacattctcactacccagtgggaacagaagtac
catggcaacaaactcaaaggagtagatctgcttcggaattggtgctacaaaggtttccac
aatgggatagtatctgagtctacgccattgtggtctctgccgacatcacttatgactgtc
tcagatagtaacaggatgctcaataccttcagcagaccagagcctggccagcggggggag
tctacttcctcaaaggacagtgaggataccagcagagagtccagtctttccacccagata
aagtactcggggcggacctcgagactttctgattcctccacttgccagtcacccattgac
tccctcgggactataagcccatcctga
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integrated database retrieval system
