Perognathus longimembris pacificus (Pacific pocket mouse): 125350445
Help
Entry
125350445 CDS
T08928
Symbol
Gtf3c3
Name
(RefSeq) general transcription factor 3C polypeptide 3 isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plop03021
]
125350445 (Gtf3c3)
Transcription machinery [BR:
plop03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
125350445 (Gtf3c3)
TFIIIC, fungi type
125350445 (Gtf3c3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_8
TPR_2
TPR_1
TPR_16
TPR_19
TPR_12
ANAPC3
TPR_7
TPR_CcmH_CycH
TPR_17
TPR_9
TPR_15
TPR_11
ARM_TT21
TPR_EMC2
SHNi-TPR
TPR_4
DUF6976
Motif
Other DBs
NCBI-GeneID:
125350445
NCBI-ProteinID:
XP_048201006
LinkDB
All DBs
Position
4:32787974..32822495
Genome browser
AA seq
883 aa
AA seq
DB search
MSGFSPELIDYLEGKISFEEFERRREERKTREKKSLQEKGKLAAEENPDDSEVPSSSGIS
STKSQDKDGNEGETSDGVSKSVHKVFASMLGETEDDEEEEEEEEEEEETPEQPTAGDVFV
LEMVLNRETKKMMKEKRPRSKLPRALRGLMGEANIRFARGEREEAILMCMEIIRQAPLAY
EPFSTLAMIYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKA
LKYEPTNVRFLWERSSLYEQMGDHKMAMDGYRRILNLLSPSDGERFMQLARDMAKSYYEA
NDSTSAINIIEEAFAKHQGLVSMEDVNIAAELYISNKQFDKALEVITDFSGIALEKKISE
ESTSEENEAVECVTCTIPDGVPIDITVKLMVCLVHLNILEPLNPLLTTLVEQNPEDMGDL
YLDVAEAFLDVGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGYMERAAESYGKVV
DLAPLHLDARISLSTLQQQLGRPEKALEALEPMYDPDTLAQDANAAQQELKLLLHRSTLL
FSQGKMYGYMDTLLTMLAMLLKVAMNRAQVCLISSSKSGERHLYLIKVSRDKISDNNDQE
TANYDAKAIFAVLTSVLPKDDWWNLLLKAIYTLCDLSRFEEAELLVDSSLEYYSFYDDRQ
KRKELEYFGLSAAILDRNFRKAYNYIRIMVMENVNKAQLWNVFNQVTMHSQDVRHHRFCL
RLMLKYPDNHALCVLNGHNAFVSGSFKHALGQYVQAFRTYPNEPLYNLCVGLTFIHMASQ
KYVLKRHALIVQGFSFLNRYLSIRGPCQESFYNLGRALHQLGLTHLAIHYYQKALELPPL
VLEGIEIDQVDLRREIAYNLSLIYQGSGNTVMAQKLLYTYCSV
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggttcagcccagaactcatcgactacctggaagggaaaatctcctttgaagag
tttgagaggcggagggaggagaggaagacccgggagaagaaaagtcttcaggaaaaagga
aaattagcagctgaagagaacccagatgattctgaagttccatcatcatcaggaatcagc
tctaccaagtcccaggacaaagatggcaatgaaggagaaacatcagatggagtgagtaag
tctgttcataaggtctttgcttccatgcttggagagactgaagatgatgaggaagaagag
gaagaggaggaggaagaggaggaaacaccagagcagcccactgcaggggatgtctttgta
ctggagatggttctcaatcgtgagaccaagaaaatgatgaaagagaaaagacctcggagt
aaacttcccagagctctgagaggtctcatgggagaagccaatattcgctttgctcgagga
gaacgtgaagaggcaatattgatgtgcatggaaatcataagacaagctcctctggcgtat
gagccattttctactcttgccatgatatatgaggatcaaggtgacatggagaagtcattg
cagtttgagttgattgctgcccatttaaatcccagcgacacagaagagtgggttagactg
gcagaaatgtctctggaacaagacaatattaagcaggccattttttgctatacaaaagct
cttaagtatgaacctactaatgttcgttttctgtgggagcgatccagcctttatgagcag
atgggtgatcataagatggcaatggatggttataggcgaattttaaacctcttgtctccg
tctgatggagaacgctttatgcagttggctagagatatggcaaagagttactatgaagcc
aatgatagtacttcagctattaacatcattgaagaagcttttgcaaagcaccagggccta
gtctccatggaagatgttaacatagcagctgaactgtatatttctaataagcagtttgac
aaagctttggaggttattacagatttttctggaatagcattagaaaagaaaatttcagaa
gaaagtacctcggaagagaatgaagctgtagagtgtgttacctgcacaatacctgatggt
gtcccaatagatatcacggtcaagttgatggtctgccttgtacatctcaacatccttgaa
ccacttaatcctcttttgacaacactggtggaacagaatcctgaagatatgggggatctc
taccttgatgttgctgaagcttttctagatgtgggtgaatacaattctgcactccccctc
ctcagtgcgctagtgtgctctgaaagatacaacctagcagtcgtctggcttcggcatgca
gagtgcctaaaggccttgggctatatggaacgagctgctgaaagctatggtaaagtggtt
gatctggctccactccatctggatgcaagaatttcactttctacccttcagcagcagttg
ggccgtcctgagaaagctctggaagctctggaaccaatgtatgacccagatactctagcg
caggatgccaatgctgcacagcaggaactgaagttactgcttcatcgttctactctcttg
ttttcacaaggcaaaatgtatggttacatggatactttgctgactatgttggccatgctt
ctaaaagtagctatgaatagagcccaggtttgtttgatttccagttccaaatctggagaa
aggcatctttaccttattaaagtatcacgagacaagatatcagacaacaatgaccaagag
acagcaaattatgatgcaaaagcaatatttgctgtactcacaagtgtcttgccaaaagat
gactggtggaaccttcttttgaaggccatatacaccttgtgtgacctatctcgatttgaa
gaagctgaattacttgtagattcatcattggaatattactcattttatgatgacagacaa
aaacgcaaagaactagaatactttggtctgtctgctgcaattctggacagaaatttcaga
aaggcatacaactatatcaggataatggtgatggaaaatgtgaataaagcccagctctgg
aatgtattcaatcaagttaccatgcattcccaagacgtacgacatcatcgcttctgtctc
cgtctaatgctgaaatacccagataatcatgccctatgtgttttaaatggacacaatgca
tttgtatctggtagctttaagcatgcacttggtcagtatgtgcaagctttccgcacctat
cctaatgaacctctctacaacctctgcgtaggcctgaccttcattcatatggcatctcag
aagtatgtgttaaagagacatgctcttattgtgcaggggttttccttccttaatcgatac
ctttccatccgtgggccttgccaggaatccttctacaatttgggccgagccctccaccag
ctagggctgacacatcttgccatccactattaccaaaaggccctggagctccctcctctt
gtgctagagggtatagaaattgaccaggtagacttaagaagagagatcgcctacaacctg
tctctcatttatcagggcagcgggaacactgtgatggcccagaagctcctctatacctac
tgttccgtgtga
DBGET
integrated database retrieval system
