Perognathus longimembris pacificus (Pacific pocket mouse): 125350476
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Entry
125350476 CDS
T08928
Symbol
Wdr75
Name
(RefSeq) WD repeat-containing protein 75
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125350476 (Wdr75)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plop03009
]
125350476 (Wdr75)
Ribosome biogenesis [BR:
plop03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
125350476 (Wdr75)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR75_2nd
Beta-prop_WDR75_1st
WD40_WDHD1_1st
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
EIF3I
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_IP5PC_F
PEP5_VPS11_N
WD40_RFWD3
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
125350476
NCBI-ProteinID:
XP_048201064
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Position
4:complement(38181633..38205147)
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AA seq
830 aa
AA seq
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MVEEDGVRVVHCGGSELNFRRAVFSADSKYIFCVSGDFIKVYSTVTEECVHILHGHRNLV
TGIQLNPNNHLQLYSCSFDGTIKLWDYLDGILIKTFVVGHKLHSLFSLAQAEDSIFAIIN
EEESDVFQLASVKLPKSPSQEVEAKEVSLVLDYINQSPKCIAFGNKGEYVAAVRDFYLSV
YFLKKKKTSRFTLSSSKNKKHAKNEFTCVACHPKEDCIASGHMDGKIRLWRNFDDEKKYM
YTCLHWHHDMVMDLAFSVTGTSLLSGGRECVLVEWRDAAEKNKEFLPRLGATIEHISVSP
AGDLFCTSHSDNKITVIHRNLDASAVIQGLVKDRSIFTGLIIDPRTKALVLNGKPGHLQF
YCLQRDKQLFNLDIIQQEYINDDDLIQIELTKAAFGCFGKWLATVEERQEKETELELQMK
LWVFNKKTQGFILNTKIAMPHDDHITALCFSNVEKSEKPVTLVTASKDGHFKVWILTDDS
DIYKKAIGWTCDFVGSYHKYQATNCCFSEDGSLLAVSFEEIVTIWDSETWELKCTFCQRA
GKIRHLCFGRLTCSKYLLGTTESGILCCWNLLTCALEWSAKLNVRVMEPDPNSENIAAVS
RSSVGSDLFIFKPSEPRPLYIQKNISREEVQWGVFVPRDVPESFTSEAYQWLNRSQFYFL
TKSQSLLTFSTKSPEEKLTPTSKQLLAEESLPTTPFYFILGKHRQQQDEKVKETLENELV
QLPLTENIPAINELLHTPAHVLPSASFLCSMFVNSLLLSTETKSAGEVPDDVDMKEEKGS
DDSDEENHFTEQVQDRNIDLEEDVVRQLSKSEEKELRKLRKVDYSWIATL
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggtggaggaggacggcgtccgcgtggttcactgtggcggcagcgagctgaacttccgg
agagccgtgttctcggcggattctaagtatatcttctgtgtctctggggactttattaaa
gtgtatagcacagttacagaagagtgtgtacacatactacatgggcatagaaatctggta
actggaatccagctcaaccccaacaaccatctgcagctgtattcttgttcctttgatggc
acaattaaattgtgggactatctagatggcattctgataaagacttttgttgttgggcat
aaacttcattccctcttttctcttgcccaagctgaggattctatctttgctataataaat
gaagaagaatcggatgtatttcagctggcctcagtgaaactgcccaaatcaccaagccag
gaagtagaagctaaggaggtttcccttgttttggattacataaaccagtcacccaagtgc
attgcgtttggaaacaagggagaatatgttgctgcagtacgggacttttacttgtctgtt
tattttttaaaaaagaaaaaaacatcaagatttactttatcgtcatcaaaaaacaagaaa
catgctaagaatgagtttacatgtgtagcatgccacccaaaggaagactgcattgcatct
ggtcacatggacggcaaaattcgcctttggagaaattttgatgatgagaaaaaatatatg
tacacatgtttacattggcaccatgatatggttatggatttggctttttcagtgacaggc
accagtctgctgagtggtgggcgtgagtgtgtacttgtagagtggcgagatgcagcagag
aagaacaaggaatttctccctcgcttaggagctactattgagcatatctctgtctcacct
gcaggagatttgttctgtacttctcactctgataataagataacagttattcaccgaaac
cttgatgcatctgcagtaattcaaggcctagtgaaagataggagtatttttactggtttg
ataattgacccaagaactaaagctttagttttgaacggaaagcctggtcacctgcagttt
tattgcctccagagggataagcagttattcaatttagatatcatacagcaggagtatatc
aatgatgatgatctgatccaaattgaactaacaaaggctgcctttggttgctttggcaaa
tggcttgcaactgtggaagagcgacaagagaaggaaactgaactagaattgcagatgaag
ctgtgggtcttcaataagaaaacacaagggttcattcttaacacaaagattgccatgcca
catgatgaccacatcacagctctctgtttctctaatgtagaaaaatctgaaaagcctgta
accttggttacagctagcaaagatggtcacttcaaagtgtggatattaacagatgattct
gatatatacaagaaagctattggctggacctgcgattttgtgggtagttatcacaaatat
caagcaactaactgttgtttctctgaagatggctctttactagcagttagttttgaggaa
atagttacaatatgggattcagaaacatgggaacttaaatgtacattttgccaacgagct
gggaaaataaggcacctttgctttgggagattgacttgttcaaagtatcttcttgggact
actgaaagtggcattctttgctgttggaatctgctcacttgtgcattggaatggagtgca
aaattaaatgttagagtgatggaacctgatcctaattcagagaatattgctgcagtctct
cggtcttcagtaggttccgatttgttcatatttaaacctagtgagccaaggccattgtat
atccaaaagaatatatccagagaggaagttcagtggggagtgtttgttccacgagatgtc
cctgagtcatttacctcagaagcttaccagtggctgaatagatcccagttttacttccta
acaaaatcacagagtttattgacattcagcacaaagtctccagaagagaaactcacacca
acaagcaaacagctgttagccgaagaaagtcttccaacaacaccattttatttcatattg
ggaaagcataggcaacagcaggatgaaaaagtaaaggaaactttagaaaatgagctggta
cagttacccttaacagagaatatacctgcaattaatgagcttcttcacactccagcccat
gtactgccatctgcctctttcctgtgttccatgtttgtaaattcattgttgctgtctact
gagactaagagcgctggagaagttcctgatgatgtagacatgaaagaagaaaaaggaagc
gatgattcagatgaagaaaatcattttactgagcaagttcaagatagaaacatagatttg
gaggaagatgttgtacgtcagttgtcaaaatctgaagaaaaagaactgaggaaactcagg
aaggttgactatagctggattgccactctttaa
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