Perognathus longimembris pacificus (Pacific pocket mouse): 125350485
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Entry
125350485 CDS
T08928
Symbol
Itgav
Name
(RefSeq) integrin alpha-V
KO
K06487
integrin alpha V
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04081
Hormone signaling
plop04145
Phagosome
plop04148
Efferocytosis
plop04151
PI3K-Akt signaling pathway
plop04510
Focal adhesion
plop04512
ECM-receptor interaction
plop04514
Cell adhesion molecules
plop04810
Regulation of actin cytoskeleton
plop04820
Cytoskeleton in muscle cells
plop04919
Thyroid hormone signaling pathway
plop05163
Human cytomegalovirus infection
plop05165
Human papillomavirus infection
plop05200
Pathways in cancer
plop05205
Proteoglycans in cancer
plop05222
Small cell lung cancer
plop05410
Hypertrophic cardiomyopathy
plop05412
Arrhythmogenic right ventricular cardiomyopathy
plop05414
Dilated cardiomyopathy
plop05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
125350485 (Itgav)
09133 Signaling molecules and interaction
04081 Hormone signaling
125350485 (Itgav)
04512 ECM-receptor interaction
125350485 (Itgav)
04514 Cell adhesion molecules
125350485 (Itgav)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125350485 (Itgav)
04148 Efferocytosis
125350485 (Itgav)
09144 Cellular community - eukaryotes
04510 Focal adhesion
125350485 (Itgav)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125350485 (Itgav)
04810 Regulation of actin cytoskeleton
125350485 (Itgav)
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
125350485 (Itgav)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125350485 (Itgav)
05205 Proteoglycans in cancer
125350485 (Itgav)
09162 Cancer: specific types
05222 Small cell lung cancer
125350485 (Itgav)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
125350485 (Itgav)
05165 Human papillomavirus infection
125350485 (Itgav)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
125350485 (Itgav)
05410 Hypertrophic cardiomyopathy
125350485 (Itgav)
05412 Arrhythmogenic right ventricular cardiomyopathy
125350485 (Itgav)
05414 Dilated cardiomyopathy
125350485 (Itgav)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125350485 (Itgav)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plop04147
]
125350485 (Itgav)
04515 Cell adhesion molecules [BR:
plop04515
]
125350485 (Itgav)
04090 CD molecules [BR:
plop04090
]
125350485 (Itgav)
Membrane trafficking [BR:
plop04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
125350485 (Itgav)
Exosome [BR:
plop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125350485 (Itgav)
Exosomal proteins of epithelial cells
125350485 (Itgav)
Cell adhesion molecules [BR:
plop04515
]
Integrins
Integrin alpha subunits
125350485 (Itgav)
CD molecules [BR:
plop04090
]
Proteins
125350485 (Itgav)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
LYRIC
Collectrin
DctQ
Motif
Other DBs
NCBI-GeneID:
125350485
NCBI-ProteinID:
XP_048201085
LinkDB
All DBs
Position
4:complement(40176625..40278814)
Genome browser
AA seq
1046 aa
AA seq
DB search
MASPVRRPMHVRPGCLLLLVPGFLLPLGGAFNLDVDSPAEYSGPEGSYFGFAVDFFAPSA
SKMFLLVGAPKANTTQPGIVEGGQVLKCDWSYSRRCQPIEFDSTGNRDFAKDDPLEFKSH
QWFGASVRSKQDKILACAPLYHWRTELKQEREPVGTCFLQDGTKTVEYAPCRSKNIDADG
QGFCQGGFSIDFTKADRVLLGGPGSFYWQGQLISDQVAEIVSKYDPNVYSIKYNNQLATR
TAQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVPRAARTLGMVYIYDGKNMSSLYNFTGEQ
MAAYFGFSVAATDINGDDYADVFIGAPLFMDRGSDGKLQEVGQVSVSLQRPSGDFQTTKL
NGFEVFARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNTVPSQIL
EGQWTAQSMPPSFGYSMKGATDIDKNGYPDLIVGAFGVDRAVLYRARPVITVNAGLEVYP
SILNQDNKTCSLPGSALKVSCFNVKFCLKADGKGSLPRRLNFQVELLLDKLKQKGAIRRA
LFLHNRSPSHSKNMTIPRGGLAQCEELIAYLRDESEFRDKLTPITIFMEYRLDYRTAADA
TGLQPILNQFTPANVSRQAHILLDCGEDNICKPKLEVSVDSDQKKVYIGDDNPLTLIVKA
QNQGEGAYEAELIVSIPPQADFIGVVRNSEALARLSCAFKTENQTRQVVCDLGNPMKAGT
QLFAGLRFSVHQQSEMDTSVMFDLQIQSSNLFDKASPLVSHKVDLAVLAAVEIRGVSSPD
HIFLPIPNWEQKENPDTEEDIGPVVQHIYELRNNGPSSFSKAMLNLQWPYKYNNNTLLYI
LHYDIDGPMNCTSDMEINPLKIKISSLQTPEKNDTIAGQGDWNHVITKRDLTLSGDIHTL
GCGVAQCLQIVCQVGRLDRGKSAILYVKSLLWTETFMNKENQNHSYSLKSSASFSVIEFP
YKNLLIEDISNSTLVTTNITWGIQPAPMPVPVWVIILAVLAGLLLLAILVFVMYRMGFFK
RVRPPQEEQEREQLQPHENGEGNSET
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggcttctccggtgcggcgtccgatgcacgttcgtcccggctgcctcctgctccttgtc
cccgggttcctgctgcctctcggtggagccttcaatctagacgtggacagtcctgccgag
tattctggccccgagggaagttacttcggcttcgcggtggatttcttcgcgcccagtgcg
tctaaaatgtttctcctggtgggagctccgaaagccaacactacccagccagggattgtg
gagggaggccaagtgctcaaatgtgattggtcttacagccgccgctgccagcccattgaa
tttgattcaacaggcaatagagacttcgccaaagatgacccattggagtttaagtcccat
cagtggtttggagcatctgtgaggtcaaaacaggataaaattttggcctgtgctccattg
taccactggaggactgagctgaagcaggagagagagcctgttggaacttgcttccttcaa
gatggcaccaagactgttgagtatgctccgtgcaggtcaaaaaatattgatgctgatgga
caaggattttgtcaaggaggattcagcattgattttacgaaagctgacagagtacttctt
ggtggtcctggtagcttttattggcaaggtcaacttatttcggatcaagtggcagaaatt
gtatctaaatatgaccccaatgtttacagcatcaagtataataaccagttagcaactcgg
actgcacaagcaattttcgatgacagttatttgggttactcagtggcggttggagacttc
aatggcgatggcatagatgactttgtttcaggagttccaagagcagcaaggactttggga
atggtttatatttatgatgggaagaatatgtcctccttatacaattttactggtgagcag
atggccgcatattttggattctctgtagctgctactgacattaatggggatgattatgca
gatgtatttattggagcgcctctcttcatggatcgaggatctgatggcaaactccaagag
gtgggacaggtctccgtgtctctgcaaagaccctcaggagacttccagactacaaagctc
aatggctttgaggtctttgccaggtttggcagtgccattgctcccttgggagacctggac
caggatggcttcaatgatattgcaatcgcagctccatatggtggtgaagataaaaaagga
attgtttacattttcaatggaagatcaacgggcttgaataccgtaccatctcaaatcctt
gagggccagtggactgctcagagcatgccaccaagctttggctattccatgaagggagcc
acagacatagacaaaaatggatatccagatttaattgtaggagcttttggtgtagaccga
gcagtcttgtacagggccagaccagttatcactgtaaatgctggccttgaagtgtaccct
agtattttaaatcaagacaacaaaacctgctcactacctgggtcagctcttaaggtttcc
tgttttaatgtcaagttctgtttaaaggcagatggcaaaggatcacttcccaggagactt
aacttccaggtggagcttcttttggataaactcaagcaaaagggagcaattcgacgagca
ctgtttcttcataacaggtccccgagtcactccaagaacatgactatcccacgggggggc
cttgcacagtgtgaggaactcatagcatatctgcgggatgaatctgaatttagagacaaa
ctcactcccattacaattttcatggagtaccgattggattacagaacagccgcagatgca
acgggcttacagcccattcttaaccagttcactcccgccaatgttagccgacaggctcat
attctacttgattgtggtgaagacaatatctgcaaacctaaactggaagtctctgtggac
agtgatcaaaagaaggtctacattggggatgacaaccctctgacattgattgttaaggca
cagaatcaaggagaaggggcctacgaagctgagctcatcgtttccatcccaccgcaggct
gacttcataggggttgtccgaaacagtgaagccttagcaagactttcctgtgcatttaag
acagaaaaccaaacccgccaggtggtatgtgaccttggaaacccaatgaaggctggaact
caactctttgctggtcttcgattcagtgtgcatcagcaatccgagatggacacgtctgtg
atgtttgatttacaaatccagagctcgaatctttttgacaaagccagccctcttgtgtct
cacaaagttgaccttgctgttttggctgctgtggagattagaggggtctcaagtcctgat
cacatctttcttccaattccaaattgggaacaaaaggagaaccctgacactgaagaagac
attgggcctgttgttcagcatatctatgagctgagaaacaatggtccgagttcattcagc
aaggccatgctgaatctccagtggccatacaaatacaataataacactttattgtacatc
cttcattatgacattgatgggccgatgaactgtacttcagatatggagatcaaccctttg
aaaatcaagatctcctctttgcaaacacctgaaaagaatgacaccattgctgggcaaggt
gactggaaccatgtcatcactaagcgggatctcaccctcagtggagacattcacactttg
ggttgtggagttgcgcagtgcttgcagatcgtctgccaggttgggagactggaccggggg
aagagtgcaatcctgtatgtgaagtcactcctgtggactgagacctttatgaataaggaa
aaccagaaccattcgtattctctgaagtcatctgcttcattcagtgtcatagagtttcct
tataagaatcttctgattgaggatatctctaactcgacattagtcaccactaatattacc
tggggcattcagccagcacccatgcctgtgcctgtgtgggtgatcattttagcagttcta
gcaggattgttgttactggccattttggtatttgtaatgtacaggatgggcttttttaaa
cgtgttcggccaccccaagaagagcaagaaagggaacaacttcaacctcatgaaaatggt
gaaggaaactcggaaacttaa
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integrated database retrieval system
