Perognathus longimembris pacificus (Pacific pocket mouse): 125350572
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Entry
125350572 CDS
T08928
Symbol
Rapgef1
Name
(RefSeq) rap guanine nucleotide exchange factor 1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04015
Rap1 signaling pathway
plop04510
Focal adhesion
plop04722
Neurotrophin signaling pathway
plop04910
Insulin signaling pathway
plop05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
125350572 (Rapgef1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125350572 (Rapgef1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
125350572 (Rapgef1)
09156 Nervous system
04722 Neurotrophin signaling pathway
125350572 (Rapgef1)
09160 Human Diseases
09162 Cancer: specific types
05211 Renal cell carcinoma
125350572 (Rapgef1)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF_N
CMD
Motif
Other DBs
NCBI-GeneID:
125350572
NCBI-ProteinID:
XP_048201224
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Position
1:complement(158511865..158606180)
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AA seq
1031 aa
AA seq
DB search
MGNAVEKQKPLSRSHLCPWRQDSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKPTEGSVK
IPEKPGNKEARDRFLPEGYPIPLDLEQQTVEFMSTSAVASRSQRQKNLSWLEEKEKEVVS
ALRYFKTIVDKMAIDKKVLEMLPGSASKVLEAILPLVQTDPRIQHSSALSSCYNRVYQSL
ANLIRWSDQVMLEGVNSEDKETVTTVKGVIKAVLDGVKELVRLTIEKQGRPSPTSPVKPS
SPAGKPDGPPELPLTDREMEILNKATGASPSTELLPDSADEEAAPPKPPLPGIRVVDNSP
PALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPVGINRQDFDVDCYAQRRLSGGSRSCGG
ESPRLSPCSSTGKLSRSDEQLSSLDRDSGQGSRNTSCETLDHYDPDYEFLQQDLSDADQI
PQQAACNLSPLPESLGESGSPFLGHPFQLPLGGCPQPEGPLVPGQQTDTPPALPEKKRRS
ATSQGTDSSGSRTPYERHPSQYDNLSEEDLQSQAPGPPGPYPPFASILPFQPAGFTAPEA
ASDPEKPPPLPEKKNKHMLAYMQLLEDYSEPQPSVFYQTPQSEHIYQQKNKMLMEVYGFS
DSFGAGDTTQELAPPPALPPKQRQLASFAASSFSSVSYCVQQTKVAFTPEDGSATQGLSV
SVSNSFLSRHGSLPVPSYKSVFRSYSQDFAPHHHASVQPFLPPTSSSSPHFPPVRPSPSA
DAAVPAAAGPPPGTADGPLSSPQESSCHGPAHLSSETSFTDSSTNASEETGEGDYVSLCS
SGQSSEELGPPRGEPAAGKDGHPRDPSTVGTPGKDSRDGGERAPKSPDALEPQSEEEVDE
LSLIDHNEIMARLTLKQEGDDGPDVRGGSGDILLVHATETDRKDLVLYCEAFLTTYRTFI
SPEELIKKLQYRYEKFSPFSDTFKKRVSKNTFFVLVRVVDELCLVELTEEILKLLMELVF
RPGEQRGAESGPRAAQEHPGQGGTRRSCCAAPTPTSPWRPGAWRPGRGPCTGLPQPRNRR
AADAAGRGALL
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatgctgttgaaaagcagaaacccctgagccgaagtcatctgtgcccctggaga
caagactcgcagcgttcgcacctctcctccttcaccatgaagctgatggacaaattccac
tcacccaaaatcaagagaactccgtccaagaagggaaagcccaccgaggggtccgtgaag
attccagagaagcctggcaacaaagaggcaagagacagatttctaccagagggctaccct
atccccttggatctggagcagcagacagtagaatttatgtccaccagtgctgtggcttcc
agatctcagaggcagaagaacctgagctggctggaagagaaggagaaggaagttgtcagt
gccttgcgctactttaagacaattgtggacaagatggctatcgataagaaggtgctggag
atgcttccagggtcagccagcaaggtgctggaggccatcttgcccctggtgcagaccgac
ccccgcatccagcacagctcagccctctcctcctgctataaccgggtgtaccaaagtctc
gccaacctcatccgttggtctgaccaggtgatgcttgaaggggtgaactcggaggacaag
gagacagtgacgacggtgaagggcgtcatcaaggccgtgctggatggagtgaaggagctg
gtcaggctcaccatcgagaagcagggacggccctctccaaccagcccggtgaagcccagc
tccccagccggcaagcctgacggtccgcccgagctccccctgacagaccgggagatggag
attctaaacaaggccacaggtgcgtcgccctccaccgagctgctcccagactctgccgac
gaagaggctgcgccccccaagccccccttgcctggcattcgggtggttgataatagtcca
ccagcattaccacccaagaaaagacagtccgccccgtcccctacccgcgtggccgtggtg
gcccccatgagccgagccaccagcggctccagcctgcctgtgggaatcaacaggcaggac
ttcgacgtggactgctacgcacagaggcgcctgtccggaggcagccggtcgtgtggcggg
gagtcgccccgcctgtccccctgcagcagcacgggcaagctcagccgatcggacgagcag
ctctcctccctggacagggacagcggccagggctcccggaacacaagctgtgaaacgctc
gatcactacgatcccgactacgaattcctccagcaagacctctccgacgccgaccagata
cctcagcaagcggcctgtaacctcagcccgctgccggagtccttgggggagtcgggctct
ccgttcctcggccaccctttccagctgcctctgggcggctgtccccagcctgaggggccc
ttggtcccagggcagcagacggataccccacccgcccttcccgagaagaagcgcaggagc
gccacctcgcagggcacggacagctcgggcagcaggacgccctacgagcggcacccctct
cagtacgacaacctctcggaggaagacctgcagagccaggcccctggcccgcccggcccc
tacccgcccttcgcctccatcctccccttccagcccgccggcttcaccgccccggaagca
gccagtgacccggagaagccaccgcctctgccagagaagaaaaacaaacacatgctggcc
tacatgcagctgctggaggactactcggagccacagccctccgtgttctaccagacgccg
cagagcgagcacatctaccagcagaagaacaagatgctcatggaggtctacggcttcagt
gactcctttggcgccggggacaccacccaggagctggctccaccgcccgccctgcccccg
aagcagcggcagctggcctcctttgctgcttcttccttctcctctgtctcctactgtgtc
cagcaaactaaagtggccttcacccccgaggacggcagtgccactcagggcctcagtgtg
tccgtgtctaactcctttctcagccggcacggcagcttgcccgtgccctcgtacaaatct
gtgtttaggtcctactcgcaggacttcgcgcctcaccaccacgcttccgtccaacctttc
ctcccgcctacctcctcctcctctccacacttcccacccgtccgcccgtctccgagcgcg
gacgcggccgtgcccgccgcggccgggccgcctcccggcaccgcagacgggcctctctcg
tctcctcaggagagcagctgccatggccctgcccacctttcctccgaaacctctttcact
gactcgagtacaaacgccagtgaggaaactggcgagggggactatgtcagtctgtgttcc
tctggccagagcagcgaggaactgggcccccctcgaggagagccagcggccgggaaggac
ggacaccccagggacccctcgacggtcggcacacccgggaaggacagcagagatggcgga
gagagggcccccaagtccccagatgctctggagcctcagtcagaagaggaagtggacgag
ctgtcactcattgaccacaatgagattatggccaggctgacgctcaagcaagagggtgac
gacgggccggacgtgcgtggaggatccggggacatcttgctggtccacgctactgagaca
gacagaaaagacctggtgctgtactgcgaggccttcctgaccacctaccgcaccttcatc
agccccgaggagctcatcaagaagctacagtaccgctacgagaagttctcgcccttctcg
gacacgttcaagaagcgtgtcagcaagaacacgttcttcgtgctggtgcgggtggtggat
gagctctgcctggtggagctgacggaggagatcctgaagctgctcatggagctggtcttc
cgccctggtgagcagcggggagctgagtctggcccgcgtgctgcgcaagaacatcctgga
caaggtggaaccagaagaagctgctgcgctgcgccaactccgaccagcccctggcggcca
ggggcgtggcggccaggccggggaccttgcaccggacttccacagccacgaaatcgccga
gcagctgacgctgctggacgcggagctcttctataa
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