Perognathus longimembris pacificus (Pacific pocket mouse): 125350585
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Entry
125350585 CDS
T08928
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03018
RNA degradation
plop03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125350585
09123 Folding, sorting and degradation
03018 RNA degradation
125350585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125350585
03041 Spliceosome [BR:
plop03041
]
125350585
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125350585
mRNA degradation factors
5'-3' decay
Lsm complex
125350585
Spliceosome [BR:
plop03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
125350585
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Arrestin_N
DUF6699
Motif
Other DBs
NCBI-GeneID:
125350585
NCBI-ProteinID:
XP_048201241
LinkDB
All DBs
Position
4:53538251..53538698
Genome browser
AA seq
80 aa
AA seq
DB search
MSLQKQTPSDFLKQIIRWTVVVKLNSGVDCQGVLACLDGYMNITLEQTEEYVNGQLKNKY
RDAFFQGNNVLYISTQKRRM
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgagtctacagaagcaaacccccagtgacttcttaaagcaaatcatcagatggacagtt
gtagtaaaattaaattctggagtagattgtcaaggggtcctggcttgcctggatggctac
atgaacataaccctggagcagacagaggaatatgtaaatggacagctgaagaacaaatat
agggatgcatttttccaaggaaacaatgtgttgtacatcagcacccagaagagaagaatg
tga
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