Perognathus longimembris pacificus (Pacific pocket mouse): 125350662
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Entry
125350662 CDS
T08928
Symbol
Ttf1
Name
(RefSeq) transcription termination factor 1
KO
K15225
transcription termination factor 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04918
Thyroid hormone synthesis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09150 Organismal Systems
09152 Endocrine system
04918 Thyroid hormone synthesis
125350662 (Ttf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plop03021
]
125350662 (Ttf1)
Transcription machinery [BR:
plop03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
125350662 (Ttf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_6
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
125350662
NCBI-ProteinID:
XP_048201420
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All DBs
Position
1:complement(159068913..159089246)
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AA seq
769 aa
AA seq
DB search
MEGKPSRYEIHTPVPDKKKKKYSVYKKKKQKWAQESFRDSSVASDQPQVNKKRRRKDVQQ
LMSPLEKSELCDKTEKTTSTHKKKKKRQNVVWEVEETGVVRVLVDKKNIENMPKDFRKDV
DMVYVAMSEEQKSAKADKTGKLNTVAKMDKNASKQFCKKAKKKKSKTPEGKVAFWDITQE
SQKASIAPPESESHTQQSLPSVHLQGKNIDLPVSAKKIKPKKKKKKLSGNQELGAMAIPE
SLHGAPPEGAQVVSQGTGEGDDVFKRAKGFHSMKKKPKKRAQLPTESTPEAGDEVSLLST
NTRNIPSDSPEGEGVLTEENVNPRAQKKTQASRASSGEEQVEEVQRLEPASEEESNLEPS
GDLATRRSADDFEDWDVDLDSAVRQLQEFIPDISGRAATTIKRMYRDDLGRFREFKAQGV
AIRFGKFSARENKQIEKNVQDFLALTGIESADKLLHTDRYPEEKSTITNLKRKHAFRVHI
GKDIARPWKLVYYRAKKIFDVNNYKGRYSKVETDKLKAYQSMHGNNWKKIGAMVARSSLS
VALKFSQLGSQINHGAWSKTETQRLIKAVEDVILKKMSVQELMDLDSRLQKNPESRLSIV
REKLYRGISWIEVEARVETRNWMQCKSKWMEILTKRMTNGRLPYHGVSALQAKINLIERL
YALNVEDANEIDWEVVAGAIGDVPPFYVQTKFYKLKAAYVPFWQKKTFPEIIDYLYETCL
PLLKEQLEKKMEKEGTQIPTPSTPKQDFLFKDIFYCEDDSEGEGMEKHS
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaaaaccaagcagatatgaaatccacacaccagtaccagacaagaaaaagaag
aagtattctgtatataagaaaaaaaaacagaaatgggctcaggaaagtttcagagactcc
tctgtggcaagtgaccagcctcaggtgaataagaagaggaggaggaaagacgtccagcag
ctcatgtctcctttagaaaaatcagaattgtgcgacaagactgaaaagaccacttctaca
cacaaaaagaagaaaaagaggcaaaatgttgtttgggaagttgaagaaaccggcgtcgtg
cgagtccttgtggataaaaaaaacattgagaacatgccaaaggattttagaaaggatgtg
gatatggtttatgttgctatgagtgaggaacaaaaatcagcaaaagcagacaaaacaggc
aaactgaatacagttgctaagatggataaaaatgcatcaaaacaattttgtaaaaaagct
aagaagaaaaagagtaagactccagaggggaaggttgcattctgggacatcacacaggaa
agccagaaggcaagcatcgccccacccgagtcagaatcacacacacagcagtccttgcct
tctgtgcatctccaaggcaaaaacatagatctcccagtgtctgctaagaaaatcaagccc
aagaaaaaaaagaaaaaattgtctggtaaccaggaattgggggccatggccatacctgag
agtcttcatggcgccccccctgaaggagcccaggtggttagccaggggactggggaagga
gatgatgtgtttaaaagggctaagggattccacagcatgaaaaaaaagcccaagaaaagg
gcacagctgcctactgaaagcaccccagaggctggtgatgaggtctctttgcttagtaca
aacacgaggaacataccctctgactctccagaaggtgagggggtattgacagaagaaaat
gtgaatcccagggcacagaagaagacccaggcctcccgggccagttcaggagaggagcag
gtggaagaggtgcagagattagagccagccagtgaagaagaaagcaacttggaaccgtct
ggggatttggcaacaagacgctcagctgacgattttgaggactgggatgtggacttggac
tctgctgtgagacagctccaagagttcattcctgacatcagtggaagggcagccaccaca
attaagcggatgtaccgggatgacctggggcggtttcgagagtttaaagcccaaggtgtt
gcgattagatttggcaagttttctgctagggaaaacaagcagatagagaaaaatgtacaa
gacttcctagcactgacaggaattgagagtgcagacaagctgctgcacacagacagatat
ccagaggaaaagtctacaatcaccaacttgaaaagaaagcatgcgttcagagtgcacatt
gggaaggacattgcccggccttggaaactcgtgtactatcgagcaaagaagatattcgat
gtcaataattacaaaggcaggtacagcaaagtagagacagacaagttgaaggcataccaa
tccatgcatgggaacaactggaagaagattggcgcgatggtggcccgcagcagcctctcg
gtggccctgaagttctcccagttgggcagtcaaataaatcatggtgcctggagtaagaca
gaaacccagagattaatcaaggcagttgaagatgtgattttgaagaaaatgtctgtccag
gaattaatggatttggattctagacttcaaaaaaatcctgaaagtcgcctatcaattgtc
cgggagaaactctacaggggcatatcatggatagaagtggaggcgagagtagaaaccagg
aactggatgcagtgcaaaagtaagtggatggaaattttgaccaaaaggatgactaatggc
aggctcccataccatggagtcagtgctctgcaggccaaaatcaacctcattgaaaggttg
tatgccctgaatgtggaagatgctaatgagatagattgggaagttgttgctggtgccatc
ggcgatgtgcctccgttttatgtccaaactaaattttataagctgaaagctgcctatgtt
cccttttggcagaaaaagacttttccagagatcatcgactacctttatgagacctgtcta
cctttgcttaaagaacagctagaaaagaagatggagaaagaaggcacccaaattccaact
ccctcaacacccaagcaagatttcctatttaaagatatcttttactgtgaggatgatagt
gagggagaaggcatggagaagcacagttaa
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