Perognathus longimembris pacificus (Pacific pocket mouse): 125350693
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Entry
125350693 CDS
T08928
Symbol
Mbd5
Name
(RefSeq) methyl-CpG-binding domain protein 5 isoform X1
KO
K23219
methyl-CpG-binding domain protein 5
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
125350693 (Mbd5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plop03036
]
125350693 (Mbd5)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
125350693 (Mbd5)
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
125350693 (Mbd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWWP
MBD
Motif
Other DBs
NCBI-GeneID:
125350693
NCBI-ProteinID:
XP_048201461
LinkDB
All DBs
Position
4:complement(71651382..72003420)
Genome browser
AA seq
1730 aa
AA seq
DB search
MNGGKECDGGDKEGGLPAIQVPVGWQRRVDQNGVLYVSPSGSLLSCLEQVKTYLLTDGTC
KCGLECPLILPKVFNFDPGAAVKQRTAEDVKADEDVTKLCIHKRKIIAVATLHKSMEAPH
PSLVLTSPGGGTNATPVVPSRAATPRSVRNKSHEGITNSVMPECKNPFKLMIGSSNAMGR
LYVQDLPGSQQQELHPVYPRQRLGSSEHGQKSPFRGSHGGLPSPASSGSQIYGDGSISPR
TDPLGSPDVFTRNNPGFHGAPNSSPIHLNRTPLSPPSVMLHGSPVQSSCAMAGRTNIPLS
PTLTTKSPVMKKPMCNFSTNMEIPRAMFHHKPPQGPPPPPPPSCALQKKPLTSEKDPLGI
LDPIPSKPVNQNPVIINPTSFHSNVHSQVPVMNVSMPPAVVPLPSNLPLPTIKPGHMNHG
SHVQRVQHSASTSLSPSPVTSPVHMMGTGIGRIEASPQRSRSSSTSSDHGNFMMPPVGPQ
ATCSGIKVPPRSPRSTIGSPRPSMPSSPSTKSDGHHQYKDIPNPLIAGMSNVLNTPCSAA
FPTASAGSGSVKSQPGLLGMPLNQILNQHNAASFPASSLLSAAAKAQLANQNKLAGNNSS
SSSSSGAVAGSSGNTEGHSTLNTMFPPTANMLLPTAEGQSGRAALRDKLMSQQKDSLRKR
KQPPTTVLSLLRQSQMDNSAVPKPGPDVLRKQGQGSFPISSMSQLLQSMSCQSSHLSSNS
TPGCGGSNTALPCSANQLHFTDPSMNSSVLQNSLTQNVPLRGEAVHCHNANTNFAHSNNP
VPNHHLAGLINQIQASGNCGMLSQSGMALGNSLHPNPPQSRISTSSTPVIPNSIVSSYNQ
TSSEAGSSGPSSSIAIAGTNHPAITKTTSVLQDGVIVTTATGNPLQNQLPLGSDFPFVGQ
EHPLHFPPNSTSNNHLPHPLNPSLLSSLPISLPVNQQHLLNQNLLNILQPSAGEGKSEIN
LHPLGFLNPNVNAALAFLSGDMDGQVLQPVHFQLLAALLQNQAQAAAMLPLPSFNLTISD
FLQQQNTPLPSLTQMTAPPDHLPSNQSDNSRAETLLTNPLGNPLPSFTSSDTTFNPLFLP
AVTGASGLMALNPQLLGGVLNSASANTANHPEVSIATSSQATTTTTTTSAAVAALTVSTL
GGTAVVSMAETLLNISNNAGNPPGPAKLNSNSVVPQLLNPLLGTSLLGDMSSINNTLNNH
QLSHLQSLLNNNPMFPPSQQQQQLLQGYQSLQAFQGQPTIPCPANNNPMACLFQNFQVRM
QEDTALLNKRISTQPGLTSIPENPHTTLPPFQDTPCELQSRIDPSLSQQVKDGQNDASVD
AIYKAVVDAASKGMQVVITTAVNSTTQISPIPALSAMSAFTASIGDPLNLSSAVSAVIHG
RNGGGVDHDGRLRSPRGARLPRNVDHGKNSNEGDGFGFEYFKSANCHTSKKQWDGEQRPR
GERNRWKYEEFLDHPGHIHSSSCHERPNNVSTLPFLPGEQHPILLPPRNCQGDKILEETF
RYNNYKRTMMSFKERLENTVERCAHINGNRPRPSRGFGELLSTAKQDLVLEEQSPSSSNS
LESSLVKDYIHYNGDFNAKSMNGCVPSPSDAKSISSEDDLRNPDSPSSNELIHYRPRTFN
VGDLVWGQFKGLTSWPGKLVREDDVHSSCQQSPEEGKVEPEKLKTLTEGLEAYSRARKRN
RKSGKLNNHLEAAIHEAMSELDKMSGTVHQIPQGDRQMRPPKPKRRKISR
NT seq
5193 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaggcaaagagtgtgacggaggggacaaggaaggaggtcttccagctatccaa
gttcctgtgggttggcagcgtcgtgtggatcaaaatggagtgctttatgtcagtcccagt
gggtctttgttatcttgcttggagcaggttaaaacgtacctgcttactgatggaacgtgc
aagtgtggcttagagtgtcctcttattcttcccaaggtgtttaattttgatcctggagct
gctgtgaagcagagaactgcagaagatgttaaggcagatgaagatgtcacaaaattatgc
atacataagagaaagatcattgcagtggccacacttcataaaagcatggaagccccgcat
ccttctctggtgctcaccagtcccggaggaggaacaaatgctactccagtagtaccttca
agggcagcaactccaagatcagtaagaaacaagtctcatgaaggaattacaaattctgta
atgcctgaatgtaaaaatcctttcaagttaatgattgggtcatcaaatgcgatgggaagg
ctctatgtacaagacctgcctggaagccagcaacaagagctccaccctgtctacccccgg
cagagattgggcagcagtgaacatggacagaaatctccattccgtggcagccatggaggc
ctgcctagccccgcgtcatcaggttcccaaatctatggagatggctcaatctctccaagg
actgacccacttggaagccctgatgttttcacaagaaataatcctggttttcatggagct
cccaattccagtcctattcacttgaataggactcctctttctccaccttcagtaatgcta
catggttctcctgtacagtcatcctgtgcaatggctggaaggactaatatacctctttcc
ccaaccttgactacaaagagtccagtaatgaaaaaaccaatgtgtaatttttcaactaat
atggaaataccacgcgcaatgttccaccacaaaccaccccaaggcccacctccccctcct
ccaccttcttgtgctcttcaaaaaaagccattaacatctgagaaagatccacttggcatt
cttgaccctattcctagtaaaccagtgaatcagaaccctgttatcattaatccaaccagt
ttccattcaaatgtccactctcaggtacctgtgatgaatgtaagcatgcctcctgctgtt
gttcctttgccaagtaatctccctttgccaaccataaaacctggtcacatgaatcatggg
agtcatgtacaaagagttcagcattcagcttcaacctccctgtccccttctccagtgaca
tccccagtgcacatgatggggactggaattggaaggattgaggcatcgccccaaagatca
cgctcatcttccacatcatcagatcacggaaatttcatgatgccacctgtaggacctcag
gccacttgcagtggtataaaggttccaccccggtcaccaaggtcaacgatagggtcccca
aggccatcaatgccatcaagcccttctaccaagtccgatggacatcatcagtacaaggat
atccctaacccattaattgctggaatgagtaatgtactaaatactccatgcagtgcagcc
ttccctactgcatctgccggaagtggttctgtaaagagtcagcctggtttgctgggaatg
cctttaaatcagatcttgaaccagcacaatgctgcctcctttccagcaagtagtttactc
tcagcagcagccaaagcacagctagcaaatcaaaacaaacttgctggtaacaacagtagc
agcagtagcagttctggagctgttgccggtagcagcggcaacacagaaggacatagcact
ttaaacaccatgttccctcctactgccaacatgcttctcccaacagctgaagggcaaagt
ggtcgagcagcactaagagataagctgatgtctcagcaaaaagactcattgcggaaaaga
aaacagccacctacaacagtgttgagtttgctcagacagtctcaaatggataactccgca
gttcctaagcccggacctgatgtgctaaggaagcagggtcagggttcatttcccatcagt
tcaatgtctcagttactacagtctatgagttgtcaaagctctcacttgagtagcaatagt
accccaggttgtgggggctcaaatactgctttgccttgctctgctaaccagctgcatttt
acagatcccagtatgaactccagtgttcttcagaattcactgacacagaacgtaccttta
agaggggaagcggtgcactgccacaatgcaaacactaactttgctcatagtaacaatcca
gtccccaaccaccatcttgcaggtttaataaatcagattcaggctagcgggaactgtggg
atgctcagtcagtcgggcatggctttaggaaattcattacatcccaatccacctcagtca
agaatttcaacgtcgtccactccagtgataccaaacagcattgttagcagctataatcaa
acaagttctgaagcaggaagttctggcccatcgtcctctatagccatagcaggcaccaac
catcctgccattacaaagacaacatctgttctccaagatggagtcatagtcaccactgca
actggcaacccactgcagaatcagctgcctcttgggagtgattttccttttgttggccag
gagcacccacttcattttccacccaacagcacttcaaacaaccatcttccacaccccttg
aaccccagcctcctcagttctctacctatctctttgccagtgaatcaacagcatctccta
aaccagaatctattaaatatcctccagccttcagcaggagaaggcaagtctgagatcaac
ctccaccctttaggttttctcaacccgaatgtaaacgctgctttagcttttctctccggt
gacatggatgggcaggtattacagcctgttcactttcaacttttagcagccctgcttcag
aaccaagcccaagcagctgccatgcttcccctaccatctttcaatctgaccatctcagat
tttttgcaacaacaaaataccccattaccctcattaacacagatgacagccccaccagac
catttgccaagcaatcagtcagacaacagcagagctgagacccttttaaccaaccccctg
gggaatcctttaccaagctttacaagcagtgacactacttttaatcccctgttcctccca
gctgtcactggggcctcaggattaatggccttgaatccccagctgttgggtggtgtcctg
aactcggcatcggccaacaccgctaatcatccagaggtttccatagcaacctcctcccag
gcaaccactaccacaaccactacatcagcagcagtggcagcactgactgtctcaacactt
ggtgggacagcagtggtgtcaatggcagaaacattgctgaatatatctaataatgctggg
aatccacctggtccagctaaactcaacagtaactctgtggtgccacagctacttaaccct
ctactggggacaagtctgcttggtgatatgtcatcaataaacaatactttgaataaccat
cagctgagtcatctacagtcgctgttaaacaacaacccgatgtttcctccaagtcagcaa
cagcaacaacttctccagggctaccagagtctccaggccttccaaggacagcccacaatc
ccctgcccagctaacaacaatcccatggcttgtctgtttcagaactttcaggtgagaatg
caagaagatacagctctcctaaacaaaagaataagcactcagccggggctgacatcaatt
cctgagaatccacatactacactcccacctttccaagatactccttgtgagttgcagtca
aggattgacccatctctcagtcagcaggtgaaggatggccaaaatgatgcctctgtagat
gccatttacaaagccgttgtcgatgcagccagcaaagggatgcaggttgtcatcaccacc
gcagtcaacagtacaactcagatcagccctattccagccctgagtgccatgagtgccttc
actgcctcgattggtgatccattaaatctctccagtgctgtcagtgcggtcattcatgga
cggaatggggggggtgttgatcacgatggcaggctgagaagccccagaggggctcgcctg
cccaggaatgtagaccatggtaaaaactcaaacgaaggagatgggtttgggtttgagtat
ttcaagtcagcaaattgccacacatccaaaaagcagtgggatggggagcaaaggcccaga
ggggagagaaacaggtggaagtatgaggaattcttagatcatccaggccatatccacagc
agttcttgtcacgaaaggcccaacaatgtctctacactgccatttctgcctggggaacag
catccaatactgttaccaccaagaaactgtcaaggagataaaattctggaggaaactttc
aggtataataactacaaaagaactatgatgagttttaaggagagactagagaacactgtg
gaacgatgtgcacacattaatggaaacagacctcgacctagtcggggttttggggagctg
ctgagcactgcaaagcaagacctcgtcctagaggagcagtctccaagttcttcaaatagt
ttggagagttctctggtcaaagactacatccattacaatggagactttaatgccaaaagc
atgaatgggtgtgtgcctagcccatcggatgctaaaagcattagtagtgaagatgaccta
aggaatccagactccccctcttcaaatgagttgatacattataggccaaggacgttcaac
gttggcgacttggtctggggccaattcaaaggactgacttcctggcctggaaaattagta
agagaagacgacgttcacagttcatgtcaacaaagccccgaggaagggaaggtggagccc
gagaagttgaagacactaacagaaggtttggaagcctacagccgagcccggaaaaggaac
agaaaaagtggaaagctaaataaccatttagaagctgctattcatgaggccatgagtgaa
ctggacaaaatgtctgggactgttcaccaaatcccacagggagacagacaaatgagaccc
cccaagcccaaaaggaggaagatctccagataa
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integrated database retrieval system
