Perognathus longimembris pacificus (Pacific pocket mouse): 125351174
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Entry
125351174 CDS
T08928
Symbol
Notch1
Name
(RefSeq) neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop01522
Endocrine resistance
plop04330
Notch signaling pathway
plop04658
Th1 and Th2 cell differentiation
plop04919
Thyroid hormone signaling pathway
plop05020
Prion disease
plop05165
Human papillomavirus infection
plop05200
Pathways in cancer
plop05206
MicroRNAs in cancer
plop05224
Breast cancer
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125351174 (Notch1)
09150 Organismal Systems
09151 Immune system
04658 Th1 and Th2 cell differentiation
125351174 (Notch1)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
125351174 (Notch1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125351174 (Notch1)
05206 MicroRNAs in cancer
125351174 (Notch1)
09162 Cancer: specific types
05224 Breast cancer
125351174 (Notch1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
125351174 (Notch1)
09164 Neurodegenerative disease
05020 Prion disease
125351174 (Notch1)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
125351174 (Notch1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
Ank
Notch
NODP
NOD
EGF_2
Ank_4
Ank_5
Ank_3
EGF_3
cEGF
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
125351174
NCBI-ProteinID:
XP_048201845
LinkDB
All DBs
Position
1:161257542..161295297
Genome browser
AA seq
2551 aa
AA seq
DB search
MPPLPAPLLCLALLLLPALAARGLRCSQPGATCLNGGRCEAANGTEACVCTGAFVGRRCQ
DPNPCLSAPCKNAGTCHLVDRGGSVNYACSCPLGFSGPLCLTPLDNACLTNPCRNGGTCD
LLQLTEYKCRCPPGWSGKSCQQADPCASNPCANGGQCLPFEASYICRCPPGFHGATCRQD
VNECSQTPGLCRHGGTCHNEVGGYRCACRAAHTGPHCELPYVPCSPSPCLNGGTCRPTGD
ATHECACLPGFAGQNCEENVDDCPGNNCKNGGACVDGVNTYNCRCPPEWTGQYCTEDVDE
CQLMPNACQNGGTCHNTHGGYNCVCVNGWTGEDCSENIDDCASAACFHGATCHDRVASFY
CECPHGRTGLLCHLNDACISNPCNKGSNCDTNPVNGKAICTCPPGYTGPACSQDVDECAL
GANPCEHAGKCLNTLGSFECQCLQGYTGPRCEIDVNECISNPCQNDATCLDQIGEFQCIC
MPGYEGVHCEVNTDECASGPCLHDGRCLDKINEFLCECPTGFSGHLCQYDVDECASTPCR
HGAKCLDGPNTYTCVCAEGYTGTHCEVDIDECDPDPCHYGSCKDGVSTFTCLCQPGYTGH
HCETNINECHSQPCRHGGTCQDRDNAYLCFCLKGTTGPNCEINLDDCASSPCEAGTCLDK
IDGYECVCEPGYTGSMCNINIDECAGGPCHNGGTCEDGIAGFTCRCPEGYHDPTCLSEVN
ECNSDPCIHGACRDSLNGYKCDCDPGWSGTNCDVNNNECASNPCVNGGTCKDMTGGYVCT
CRAGFSGPNCQTNVNECASNPCLNQGTCIDDVAGYRCNCPLPYTGATCEVVLAPCTPSPC
KNSGACKESEDYESFSCICPPGWQGQTCEVDINECVKSPCRNGASCLNAQGGYRCLCQAG
YTGRNCESDIDDCRPQPVSQRGLLHGRRQRGLLRLPAGVPGRLLRGGHQRVRQRPLPQRR
QLHGLRGQLHLHLPRGLQRHPLREQHARLHGELLLQRRHLRGRHQLLHLPVSSGLHGQLL
PVRRERVRLSALPARGHLPGQLRHLQVRLPPGLHRPQLPEPGALVRLVPLQERRAVLADQ
HPVPLPVPQRLDRLLLRRAQRVVRGGRAGSGASTSPACASTGGCAWTPTTRTTAAARPAT
RAATARTRWTSARPAPARTGPPAPTTWAATPASAWPATTGPTAPRRSTSACRSPARTGAP
ASTSPTPTSALARGAPRACTVRSTWTTVTPRLDPASRGPKCFNNGTCVDQVGGYTCSCPP
GFVGERCEGDVNECLSNPCDARGTQNCVQRINDFHCECRAGHTGRRCESVINGCKGKPCK
NGGTCAVAANMARGFICRCPAGFEGVTCENDARTCGSLRCLHGGTCVSGPRGPTCLCRGP
FTGPECQFPAGSPCVGDNPCYNQGTCEPAAESPFFRCLCPAKFNGLLCHILDYSFAGGAG
RDIPPPPVEEACALPQCREDAGNKACNPQCNNHACGWDGGDCSLNFNDPWKNCTQSLQCW
KYFGNGRCDAQCNTAGCLFDGFDCQRTEGQCNPLYDQYCKDHFRDGHCDQGCNSAECEWD
GLDCAEHVPERLAAGTLVLVVLVPPERLRNNSLSFLRELSHVLHTNVVFKRDAQGQHMIF
PYYGHEEELRKHPIKRAAAAWAPPGHPPALLLSPGAAAATAGRRQRRELDPMDIRGSIVY
LEIDNRQCVQSSSQCFQSATDVAAFLGALASLGSLNLPYKIEAVQSETVEPPPPSQLHLM
YVAAAAFVLLCFVGCGVLLSRKRRRQHGQLWFPEGFKVSEASKKKRREPLGEDSVGLKPL
KHASDGALMDDNQNEWGDEDLETKKFRFEGPVVLPDLDDQTDPRQWTQQHLDAADLRVSA
MAPTPPQGEVDADCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQG
ASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVF
QILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAA
VNNVDAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLP
RDIAQERMHHDIVRLLGEYNLVRSPPLHGSALAGAPTLSPTLCSPNGYLGNLKPAAQGKK
ARKPSAKGLACGGKDAKDLKARRKKSQDGKGCLLDSSGLLSPVDSLESPHGYLSDVASPP
LLPSPFQQSPSVPLGHLPGMPDAHLGVGHLNVAAKPEMAALGGGGRLGFEPGPPRLSHLP
VVSSGGAALGAGGGAAVNFAVGAGGGLSGQCEWLSRLQNGLVPTQYNPLRGGAPAPALPH
GMLGPLHGGLSAGALSQIMGYQGLPGTRLAGQPHLVQTQPPAGPQPSLPPPGLPQPQTLQ
PPPPQPHLGVSPAAAAAAAGGPLGRGFLSGEPSQVDVQPLGPSSLPAHTVLPQEPQALST
PLPAPLAPPPMATAQFLTPPSQHSYSSSPADNTPSHQLQVPEHPFLTPSPESPDQWSSSS
PHSNISDWSEGISSPPTSMPSQIAHIPEAFK
NT seq
7656 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgctcccggcgccgctgctctgcctggcgctgctgctgctgcccgcgctcgcc
gccagaggtctgagatgctcccagcccggtgcaacctgcctgaatggagggaggtgtgaa
gccgccaacggaaccgaggcctgcgtctgcacgggggcctttgtgggccggcggtgccag
gaccccaacccgtgcctcagtgccccgtgcaagaacgccgggacctgccacctggtggac
cgcgggggctcggtgaactacgcctgcagctgccccctgggcttctccgggcccctctgc
ctgacgcccctggacaacgcctgcctgaccaacccgtgccgcaacgggggcacctgcgac
ctgctgcagctcacggagtacaagtgccgctgcccccctggctggtcagggaagtcctgc
cagcaggctgacccgtgtgcctccaacccctgcgccaacggcggccagtgcctgcccttc
gaggcctcctacatctgccgctgcccgccgggcttccacggcgccacctgcaggcaggac
gtgaacgagtgcagccagacgccggggctgtgccgccacgggggcacgtgccacaacgag
gtgggcggctaccgctgcgcctgccgggccgcccacaccgggccccactgcgagctgccc
tacgtgccctgcagcccctcgccctgcctcaacggcggcacctgccgccccaccggggac
gccacccacgagtgcgcctgcttgccaggcttcgccggccagaactgtgaggaaaacgtc
gacgactgtcccggaaacaactgcaagaacgggggcgcctgcgtggacggcgtgaacacc
tacaattgccgctgccccccggagtggacaggccagtactgcacggaggacgtggacgag
tgccagctcatgcccaacgcctgccagaacggggggacctgccacaacacccacggcggc
tacaactgcgtgtgcgtcaacggctggacgggcgaggactgcagcgagaacatcgacgac
tgcgccagcgccgcctgcttccacggggccacctgccacgaccgcgtggcctccttctac
tgcgagtgcccccacgggcgcaccggtctgctgtgccacctcaacgacgcgtgcatcagc
aacccctgcaacaagggctccaactgtgacaccaaccccgtcaacggcaaggccatctgc
acctgccccccggggtacacggggccggcctgcagccaggacgtggacgagtgcgcgctg
ggtgccaacccctgtgagcacgcgggcaagtgcctgaacacgctggggtccttcgagtgc
cagtgtctgcagggctacacgggcccccgctgcgagatcgacgtcaacgagtgcatctcc
aacccctgtcagaacgacgccacctgcctggaccagatcggggagttccagtgtatctgc
atgcccggttacgagggcgtgcactgcgaggtgaacacggacgagtgtgccagtggcccc
tgcctgcacgacggccgctgtctggacaagatcaacgagttcctgtgcgaatgccccacc
ggcttcagcggccacctgtgtcagtacgacgtggacgagtgtgccagcacgccgtgcagg
catggtgccaagtgcctggacgggcccaacacgtacacctgcgtgtgcgcggaaggctac
accgggacgcactgcgaggtggacattgacgagtgcgaccccgacccctgtcactacggc
tcctgcaaggacggcgtgtccaccttcacctgcctctgccagcccggctacaccggccac
cactgtgagaccaacatcaacgagtgccacagccagccctgccgccacggcggcacctgc
caggaccgcgacaacgcctacctctgcttctgcctcaaggggaccacaggacccaactgc
gagatcaacctggacgactgcgcgagcagcccctgtgaagccggcacgtgcctggacaag
atcgacggctacgagtgcgtctgcgagcccggctacacagggagcatgtgcaacatcaac
attgacgagtgtgcgggcggcccctgccacaacgggggcacctgcgaggacggcatcgcc
ggcttcacctgccgctgccccgagggctaccacgaccccacctgcctgtccgaggtcaac
gagtgcaacagcgacccctgcatccacggggcctgccgggacagcctcaacgggtacaag
tgcgactgtgaccccggctggagcgggaccaactgcgacgtcaacaacaacgagtgcgcg
tccaacccttgtgtcaacgggggcacctgcaaggacatgaccggcggctacgtgtgcacc
tgccgggccggcttcagcggccctaactgccagaccaacgtgaacgagtgcgcctccaac
ccctgcctcaaccagggcacctgcatcgacgacgtggccggctacaggtgcaactgcccg
ctgccctacacaggggccacgtgtgaggtggtgttggcgccgtgcacccccagcccctgc
aaaaacagtggggcgtgcaaggagtcggaggactacgagagcttctcctgcatctgtccc
ccggggtggcaggggcagacctgcgaagtggacatcaacgagtgtgtgaagagcccctgc
cggaacggcgcgtcctgcctcaacgcccaggggggctaccgctgcctgtgccaggccggc
tacacgggccgcaactgcgagagcgacatcgacgactgccggccccaacccgtgtcacaa
cgggggctcctgcacggacggcgtcaacgcggcctcctgcgactgcctgccggggttcca
gggcgccttctgcgaggaggacatcaacgagtgcgccagcgacccctgccgcaacggcgc
caactgcacggactgcgtggacagctacacctgcacctgccccgcgggcttcaacggcat
ccactgcgagaacaacacgcccgactgcacggagagctcctgcttcaacggcggcacctg
cgtggacggcatcaactccttcacctgcctgtgtcctccgggcttcacgggcagctactg
ccagtacgacgtgaacgagtgcgactctcggccctgcctgcacgggggcacctgccagga
cagctacggcacctacaagtgcgcctgcccccagggctacaccggcctcaactgccagaa
cctggtgcgctggtgcgactcgtccccctgcaagaacggcgggcagtgctggcagaccag
caccctgtaccgctgccagtgccacagcggctggaccggcttctactgcgacgtgcccag
cgtgtcgtgcgaggtggccgcgcggggagcggggcatcgacgtcgcccgcctgtgccagc
acggggggctgtgcgtggacgccaacaacacgcaccactgccgctgccaggccggctaca
cgggcagctactgcgaggacgaggtggacgagtgctcgcccagcccctgccagaacgggg
ccacctgcaccgactacctgggcggctactcctgcaagtgcgtggccggctaccacgggg
ccaactgctccgaggagatcaacgagtgcctgtcgcagccctgccagaacgggggcacct
gcatcgacctcaccaacacctacaagtgctcttgcccgcggggcacccagggcgtgcact
gtgagatcaacgtggacgactgtaaccccccggctcgaccccgcttcgcggggccccaag
tgcttcaacaacggcacctgcgtggaccaggtgggcggctacacctgctcgtgcccgccg
ggtttcgtgggcgagcggtgcgagggcgacgtcaacgagtgcctgtccaacccctgcgac
gcccgtggcacccagaactgtgtgcagcgcatcaacgacttccactgcgagtgccgggcc
ggacacaccgggcgcagatgtgagtccgtcatcaatggctgcaagggcaagccgtgcaag
aacgggggcacctgtgccgtggccgccaacatggcgcgtggcttcatctgccggtgtcct
gcgggcttcgagggcgtcacctgcgagaacgacgcccgcacctgcgggagcctgcgctgc
ctccacggcggcacgtgcgtctcggggccccgcgggcccacctgcctgtgccggggcccc
ttcacgggccccgagtgccagttcccggccggcagcccctgcgtgggcgacaacccctgc
tacaaccagggcacctgcgagcccgccgccgagagccccttcttccgctgcctgtgcccc
gccaagttcaacgggctgctgtgccacatcctggactacagcttcgcggggggcgcgggg
cgcgacatccccccgccgccggtggaggaggcgtgcgccctgccccagtgccgggaggac
gcgggcaacaaggcgtgcaacccgcagtgcaacaaccacgcgtgcggctgggacggcggc
gactgctccctcaacttcaacgacccctggaagaactgcacgcagtccctgcagtgctgg
aagtacttcggcaacggccgctgcgacgcgcagtgcaacaccgccggctgcctcttcgac
ggcttcgactgccagcgcaccgagggccagtgcaaccccctgtacgaccagtactgcaag
gaccacttcagagacgggcactgcgaccagggctgcaacagcgccgagtgcgagtgggac
gggctggactgcgcggagcacgtgcccgagcggctggcggccggcacgctggtgctggtg
gtgctggtgccgcccgagcggctgcgcaacaactccctgtccttcctgcgggagctcagc
cacgtgctgcacaccaacgtggtcttcaagcgggacgcgcagggccagcacatgatcttc
ccctactacggccacgaggaggagctgcggaagcaccccatcaagcgggccgcggcggcc
tgggccccgcccggccaccccccggccctgctgctctcccccggagccgccgccgccacc
gccggcaggcgccagcgccgggagctcgaccccatggacatccgagggtccatcgtctac
ctggagatcgacaaccggcagtgcgtgcagtcctcctcccagtgcttccagagcgccacg
gacgtggccgccttcctgggggcgctggcctctctcggcagcctcaacctcccctacaag
atcgaggccgtgcagagcgagaccgtggagcccccgccgccctcccagctgcacctcatg
tacgtggccgccgccgccttcgtgctgctgtgcttcgtgggctgcggggtgctgctgtcc
cgcaagcggcggcggcagcatggccagctctggttccccgaggggttcaaggtgtccgag
gccagcaagaagaagcggcgcgagcccctgggcgaggactccgtgggcctcaagcccctg
aaacatgcctcggacggcgccctgatggacgacaaccagaacgagtggggggacgaggac
ctggagaccaagaagttccggtttgaagggccagtggttctccccgacctggatgaccag
accgacccccggcagtggacgcagcagcacctggacgccgctgacctgcgcgtgtccgcc
atggcccccacgcccccccagggcgaggtggacgccgactgtatggacgtcaacgtccga
gggccagacggcttcaccccgctcatgatcgcctcctgcagcggagggggcttggagacg
ggcaacagcgaggaggaggaggacgcgcccgccgtcatctcggacttcatctaccagggc
gccagcctgcacaaccagacagaccgcaccggcgagaccgccctgcacctggccgcccgc
tactcgcgctccgacgccgccaagcgcctgctggaggccagcgccgacgccaacatccag
gacaacatggggcgcacgcccctgcacgccgccgtctccgcggacgcgcagggcgtcttc
cagatcctgatcaggaaccgagccacggacctggacgcgcgcatgcacgacggcacgacg
ccgctcatcctggccgcgcggctggcggtggaggggatgctggaggacctcatcaactcc
cacgccgacgtcaacgccgtggacgacctgggcaagtcagccctgcactgggcagctgcc
gtgaacaacgtggacgccgcggtggtgctcctgaagaacggggccaacaaggacatgcag
aacaacaaggaggagacccccctgttcctggctgcccgggagggcagttacgagacggcc
aaggtgctgctggaccactttgccaaccgggacatcaccgaccacatggacaggctgccc
cgcgacatcgcccaggagcgcatgcaccacgacatcgtgcggctgctgggtgagtacaac
ctggtgcgcagccccccgctgcacggctccgccctggccggcgcgcccacgctgtcgccc
acgctctgctcgcccaacggctacctgggcaacctcaagcccgctgcgcagggcaagaag
gcccgcaagccgagcgccaaaggcctggcctgcggcggcaaggacgccaaggacctcaag
gcccggaggaagaagtcccaggacggcaagggctgcctgctggacagctcgggcctgctg
tcgcccgtggactcgctcgagtccccccacggctacttgtccgacgtcgcctcgccgccg
ctgctcccgtcccccttccagcagtcgccgtccgtgcccctcggccacctgccgggcatg
cccgacgcccacctgggcgtgggccacctgaacgtggccgccaagccggagatggcggcc
ctgggcgggggcggccggctgggcttcgagccgggccccccgcgcctctcccacctcccc
gtggtctcttccggcggcgcggccctgggcgccggcggcggggcggcggtgaacttcgcg
gtgggcgccggcggcggcctgagcggccagtgcgagtggctgagccggctgcagaacggc
ctggtgcccacccagtacaaccccctgcgggggggcgccccggcccccgccctcccgcac
ggcatgctgggccccctgcacggcggcctctcggccggcgcgctctcccagatcatgggc
taccagggcctgcccggcacgcggctggccggccagccccacctggtgcagacgcagccc
cccgcggggccgcagcccagcctgcccccgcccggcctcccgcagccccagaccctgcag
ccgccgccgccgcagccccacctgggcgtgagccccgccgctgccgccgccgccgccggg
gggcccctgggccgcggcttcctgagcggggagcccagccaggtggacgtgcagccgctg
ggccccagcagcctgccggcccacaccgtcctgccccaggagccccaggccctgtccacc
ccgctgcccgccccgctggcgcccccgcccatggcgaccgcccagttcctgaccccgccc
tcccagcacagctactcctcctcccccgcggacaacacccccagccaccagctgcaggtg
cccgagcaccccttcctcacgccctcccccgagtccccggaccagtggtccagctcctcc
ccgcattccaacatctccgactggtccgagggcatctccagcccgcccaccagcatgccg
tctcagatcgcccacattccagaggcgttcaagtga
DBGET
integrated database retrieval system
