KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125351175
Entry
125351175         CDS       T08928                                 
Name
(RefSeq) LOW QUALITY PROTEIN: integrin beta-2-like
  KO
K06464  integrin beta 2
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04015  Rap1 signaling pathway
plop04145  Phagosome
plop04390  Hippo signaling pathway
plop04514  Cell adhesion molecule (CAM) interaction
plop04517  IgSF CAM signaling
plop04518  Integrin signaling
plop04610  Complement and coagulation cascades
plop04613  Neutrophil extracellular trap formation
plop04650  Natural killer cell mediated cytotoxicity
plop04670  Leukocyte transendothelial migration
plop04810  Regulation of actin cytoskeleton
plop05133  Pertussis
plop05134  Legionellosis
plop05140  Leishmaniasis
plop05144  Malaria
plop05146  Amoebiasis
plop05150  Staphylococcus aureus infection
plop05152  Tuberculosis
plop05166  Human T-cell leukemia virus 1 infection
plop05323  Rheumatoid arthritis
plop05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:plop00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04015 Rap1 signaling pathway
    125351175
   04390 Hippo signaling pathway
    125351175
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    125351175
   04517 IgSF CAM signaling
    125351175
   04518 Integrin signaling
    125351175
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    125351175
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    125351175
 09150 Organismal Systems
  09151 Immune system
   04610 Complement and coagulation cascades
    125351175
   04613 Neutrophil extracellular trap formation
    125351175
   04650 Natural killer cell mediated cytotoxicity
    125351175
   04670 Leukocyte transendothelial migration
    125351175
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    125351175
  09171 Infectious disease: bacterial
   05133 Pertussis
    125351175
   05134 Legionellosis
    125351175
   05150 Staphylococcus aureus infection
    125351175
   05152 Tuberculosis
    125351175
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    125351175
   05144 Malaria
    125351175
   05140 Leishmaniasis
    125351175
  09163 Immune disease
   05323 Rheumatoid arthritis
    125351175
  09166 Cardiovascular disease
   05416 Viral myocarditis
    125351175
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:plop04131]
    125351175
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:plop04147]
    125351175
   04515 Cell adhesion molecules [BR:plop04515]
    125351175
   04090 CD molecules [BR:plop04090]
    125351175
Membrane trafficking [BR:plop04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    125351175
Exosome [BR:plop04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   125351175
Cell adhesion molecules [BR:plop04515]
 Integrins
  Integrin beta subunits
   125351175
CD molecules [BR:plop04090]
 Proteins
  125351175
SSDB
Motif
Pfam: Integrin_beta EGF_integrin Integrin_B_tail PSI_integrin EGF_2 I-EGF_1
Other DBs
NCBI-GeneID: 125351175
NCBI-ProteinID: XP_048201842
LinkDB
Position
5:3582455..3594755
AA seq 707 aa
MLHPSFLLLALLGLLPLRPALIQVCIKGRVRTCRDCLQAGPGCAWCQKPNFTGPGEPDFI
RCDTXAWLQKKGCEEKDILDPKSSAVPQEDRRGGPTRLTPPHVTLHLRPGREAAFNVTFR
RAPDDPLDLYFLMAFRDPRHGSATAVQTLGRDLLRALHGVSSAARIGFGYVVNESFRHVL
KLTADTNRLLTEVRGLRISGRPVALESGLDAMLQVAACGEIGWRNATRVLVFATDRDLPT
ARVQKQGPRPAPNDGRCHLEGDVYQSGHRAGYPSVGQLAHKLAENGIQTIFMVTTQAGKT
YENLTEIIPKSAVGELSDDSSNVVQLIKNAYNKLSSRVFLDHSSLPNTLKVTYDSFCSNG
VSLTGQPRGDCDGVQINVPVSLTSTVTATTCPQNQSFVIRALGFTDTVTVQVLPQCQCQC
RDQNKDRGHCGGKGSLECGICRCDAGYIGKNCECQTQGKSIQELEGSCRKDNGSFVCSGL
GDCICGQCVCHTSEEPNKEIFGRYCECDNVNCERHHGQPCGGPGRGLCSCGQCQCLEGFE
GSACQCPRSTAGCLNARRVECSGRGRCRCNTCECDMGYQPPLCEECPGCPAPCARYLPCA
ECLKFKRGAFKKNCSAACGGLRLLPAPVRGKPCKEPGSDYCWISYTLRQRDGRDSYDVYV
EDGQECIRFSGTSTIAGGKWWVAVTLPVVIWLVLTHFKDEAPAPAEQ
NT seq 2124 nt   +upstreamnt  +downstreamnt
atgctgcacccctctttcctgctgctcgccctactggggctgctccccctcaggcccgcc
ctgatccaggtctgcatcaagggcagggtccgcacctgcagggactgtctccaggcgggg
cctggctgcgcctggtgccagaagccgaacttcacaggtccaggggagcccgacttcatc
cgctgcgacaccnnggcgtggctgcagaagaagggctgcgaggaaaaggacatcctggac
cccaagagctctgcggtgccccaggaagaccggcggggggggcccacgcggctgaccccg
ccgcacgtgaccctgcacctgcggccggggcgggaggctgcgttcaacgtgaccttccgg
agggctccggacgaccccctcgacctctacttcctgatggccttccgcgaccccaggcac
ggcagcgccacggccgtccagacgctgggccgggacctgctccgggccctccacggggtg
tccagcgccgcccgcatcggattcgggtacgtggtgaacgagtcgttccggcacgtgctg
aagctgaccgcggataccaaccggctcctgacggaggttcgggggctgcggatttccgga
aggccggtggccctggagagcgggctggatgccatgctccaagtggctgcttgcggggaa
atcggctggcgcaacgcgactcgcgtactggtgtttgctacggaccgcgacctccccact
gcccgcgttcagaagcagggcccccgcccggcccccaacgacggccggtgccacctggag
ggcgacgtgtaccagagcggccacagagctggctacccctcggtgggccagctggcgcac
aagctggcagaaaacggcatccaaaccatctttatggtgaccacgcaggcagggaagacc
tacgagaatctgaccgagatcatccccaagtcggcggtcggggagctgtctgacgactcc
agcaacgtggtgcagctcatcaagaacgcctacaataaactgtcctcccgcgtcttcctg
gaccacagctccctccccaacaccctgaaggtcacctatgactccttctgcagtaacggg
gtgtctctcaccggccagcccagaggagactgcgacggtgtgcagatcaacgtcccggta
agcctgacctccaccgtcacggccaccacgtgcccccagaaccagtcgtttgtcatccgg
gccctgggcttcacagacacggtgaccgtgcaggtcctcccccagtgccagtgccagtgc
cgagaccagaacaaggaccgcgggcactgcgggggcaagggctccctggagtgcgggatc
tgcaggtgtgatgctggctacattgggaagaactgcgagtgtcagacgcagggcaagagc
atccaggagctggagggcagctgccggaaggacaacggctccttcgtgtgctccgggttg
ggggactgcatctgcgggcagtgcgtgtgccacaccagcgaggaacccaacaaggagatc
tttgggcggtactgcgagtgtgacaacgtcaactgtgagcggcaccacggccagccgtgt
ggaggcccggggcggggcctctgctcctgcggccagtgccagtgcctggagggcttcgag
ggctccgcctgccagtgcccccggtccaccgcgggctgcctgaacgcgcgccgcgtggaa
tgcagcggccgcggccggtgccgctgcaacacgtgcgagtgcgacatgggctaccagccg
cccctgtgtgaggagtgccccggctgcccggcgccctgtgcccggtacctcccctgtgcc
gagtgcctgaagttcaagaggggcgccttcaagaagaactgcagcgccgcgtgtgggggc
ctgaggctgctgcccgcccccgtgaggggcaagccgtgcaaggagccgggctcggactac
tgctggatctcctacaccctgcggcagcgcgacgggagggacagctacgacgtctacgtg
gaggacggccaggagtgcataagattttccggaacctccaccatcgcaggaggcaagtgg
tgggtggccgtcactcttccggtggtcatctggttggtcctgacccacttcaaggatgaa
gctccagccccggcagaacaataa

DBGET integrated database retrieval system