Perognathus longimembris pacificus (Pacific pocket mouse): 125351373
Help
Entry
125351373 CDS
T08928
Name
(RefSeq) germinal-center associated nuclear protein
KO
K24317
germinal-center associated nuclear protein [EC:
2.3.1.48
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125351373
03036 Chromosome and associated proteins [BR:
plop03036
]
125351373
Enzymes [BR:
plop01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
125351373
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
125351373
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
125351373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM3AP_GANP
NupH_GANP
SAC3_GANP
CID_GANP
RRM_1
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
125351373
NCBI-ProteinID:
XP_048202018
LinkDB
All DBs
Position
5:364892..409163
Genome browser
AA seq
1975 aa
AA seq
DB search
MNPGNPFGGQQPSAFAASSSSAGGTFQAKAPFRFGQPSVFGQSNTLSGKNTVFSQVPSFV
APSGISHSSKEQTFGLTQTSSAGLFSGLEHTPFVATSGPSSSPVPGNPGFNLKSSTSIGG
FPSTSTFGPEAGEIVSSGFGKTEFSFKTLENAVFRPILGAESEPEKTQSQVTSGFFTFSH
PVSSGPGSLTTPFSFPQVTSNSATNSNFIFSKPASTSNPSAFAPALLNQNVEEEKRGSRP
VFGGSSSSFSSFAISSGSLGEPFPASKTSARQGCEEAVSQVEPLPNLMKGLKRKEDQDRS
PRRHGHEAAEDSDPLSRGDHPPDKRPVRLTRPRGGTLFGRTIKDVFKSNKEAGRLINKES
KKESCFVESGESEPSRGSQSVLAPSRLPGVNKEEETESRDKKEDSLRGTPVHQKRSESTD
SLGGFSPLEATAIQCKNIPDNLNDRAILENYFSKVAKVQRIFTRRSRKLAVVHFFDHESA
ALARKKGKSLHKDVSIFWHKKKISPNKKPVSLKEKKLGDSETSQGMEDASFQHSSLGKPV
MRAATGSLLNKSSPVKKPSLVKAHQFEGDPFDSGSEGSEGLGPCVSSLSTLIGTMAETSE
DKYRLLDQRDRIMRQARVKRTDLDKARTFVGTCPDMCPEKERYMRETRSQLSVFEVVPGT
DQVDHAAAVKEYSRSSADQEEPLPHELRPSAVLSRTMDYLVTQIMDQKEGSLRDWYDFVW
NRTRGIRKDITQQHLCDPLTVSLIEKCTRFHIHCAHFMCEEPMSSFDAKINNENMTKCLQ
SLKEMYQDLRSKGVSCASEAEFQGYNVLLNLNKGDILREVQQLHPDVRNSPEVGLAVQAF
AALNSNNFVRFFKLVQSASYLSGCLLHCYFNQIRRDALRALNVAYTVSTQRSTVFPLDSV
VRMLLFRDGQEATDFLSFHGLTVSDGCVELNRSAFLEPEALFKARKSVFIAKKLMVSVGE
IVNGGPLPPVPRHAPVCSFNSQNKYIGESLAAELPVSPQRPCADVAGGREEDCEAEPSVP
LPGLLTQSPPGPVHALASLPHAPALTPAVASSLFQPSTQLELMPPKPAPTYSDADLAAVV
DELIQEALQGDCEEVGIAGAAYVSAALGVSNAAMEDLLTAATVGILRHVAAEEVAKERER
KEEETRRAEEERLKQERELVLTQLSQGLAAELTELMVTECVWEICAEELKFAMETDKRVR
MARCSEDVCAHLVSLFLAEEIFQIAKETLQELQCFCKYLQRWREAVAARKKLRRQMRAFP
AAPCCVDVNDPLQALAPSAECPIAEQNLAKGLLDLGHAGKVGISCTRLRRLRNETAHQMK
VQHFHQQLLSKAAWAPLDLPSFVAEHFPVTREQVFWKLVLVLPDGEEQSPGSPGRILTNW
LKVKFMGDDGVASDRCRSAGEMETLAIANALSSKGGQTVSVNVCIKVAHGTLSDGALDAV
EAQKDLLGASGLMLLLPPKVKNEDTVEEDVYRLSALLQLKQLLQAKPFQPALPLVVLVPS
SRRHALGKEVEDGLMLQDLISAKLISDYIVVEIPDSVNDLQGTLKVTHAVEWLVSHCPQA
LDLCCQTLIQYVEDGLGHEFSGRFFHDRKERRLAGLASQEPGAIVELFNSVLQFLASVVS
SEQLCNLSWPVTEFAEAGGSQRLPHLHWNSPEHLAWLKQAVLGFQLPQLDLPPPGAPWLP
MCSMVIQYASQIPSSQQTRPVLQSQVENLLRKTYCQWKGKSLSLRPGAGPSVAEVPWDDV
IALCINHKLRDWIPPKLPVMSEALSEDGQICVYFFKNDLKKFDVPLSWEQARVQTQKELQ
LSQRRLGIKSYHPSASNFPTPLLQVHQKGKRSTERGPKGSPSAEDLMRGASAEELLIQCL
SSSLLLEKEENKRFEDQLQQWLSQDSGTFTDSTSLPLYLPQTLVSLPGNIESMAKASTVT
GPQTAKTREQLQLSETVGTSLTERLKHLERLIQSSREEEVASELHLSALLDMVDI
NT seq
5928 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagggaacccttttggtgggcagcagcctagtgcttttgcagcatcttctagt
agtgctggaggtacatttcaggctaaggcaccatttcgatttggtcaaccttctgttttt
gggcaaagtaacacattatctgggaagaacacggtcttttcacaggtacccagctttgta
gcaccttctggaataagtcattcctctaaagaacaaacatttggcctcacccaaacctca
agtgctggactcttttctggacttgaacacactccttttgtagctacatctgggccttca
agttcacctgtgcctggaaacccaggatttaatctcaaatcatccaccagcattgggggt
ttcccaagcacttctacttttggaccagaagctggagaaatagtgagttctggctttggg
aaaacagaattcagctttaaaactctggaaaatgcagtgttcagaccaatcctgggggct
gagtctgagccagaaaaaacacagagccaagttacttctggattttttacattttcccat
ccagtcagtagtggacctggcagtctaacgacccctttttcttttcctcaggtgacaagt
aattcagctactaattcaaattttatcttttcaaaaccagctagtactagtaacccatct
gcttttgctcctgctttattaaaccaaaatgtagaggaagagaagagaggttctagacca
gtgtttggaggttctagtagtagcttcagtagcttcgccatatcttcagggtctttagga
gaaccctttcctgctagcaaaacaagtgcccggcaggggtgtgaagaagctgtttcccaa
gtggagccacttcccaacctcatgaagggactgaaaaggaaagaggaccaggaccggtca
ccaaggagacatggccatgaggcagcagaagactctgaccctctgtccaggggtgaccat
cctccagataaacgacctgttcgcttaactcggccccggggaggcactttgtttggccgg
acgataaaggatgtcttcaaaagcaataaagaagccggccgtctgatcaacaaggagtct
aaaaaggagagctgttttgtggagtctggggaaagtgaaccatctcgagggagtcagtct
gtcctggcaccttcccggcttccaggtgtgaataaagaggaagaaactgaaagcagagat
aaaaaagaagattctctgaggggaactcctgtgcaccagaaaagaagtgagagcacagac
agtcttggaggtttttctcccttagaagccacggctatccagtgcaagaacatccctgat
aatctcaatgacagagccattttggagaactacttcagtaaagttgctaaagtgcagcgc
atcttcaccaggcgcagcagaaagcttgcagtagtgcacttttttgatcatgaatctgca
gctctggctcgaaagaaagggaaaagtttacataaggatgtatctattttttggcacaag
aagaaaatcagtcccaacaagaaacccgtttccctgaaggagaagaaactcggtgacagt
gaaactagccagggcatggaggatgcatccttccagcactcttcgctgggcaagcctgta
atgagggcagcaactggcagcctcctgaataagagctctccagtgaagaagccaagtctt
gtgaaggcccaccaatttgagggagacccctttgactctgggtctgagggctctgagggc
cttgggccatgtgtgtcctctctcagcactctgataggcaccatggctgagacatcagag
gataagtaccgcctgcttgaccagagagacagaatcatgcggcaagctcgggtaaagagg
acagatctggacaaagcaaggactttcgtagggacgtgccctgatatgtgtcccgagaag
gagcgttatatgcgggagactcggagccagctgagtgtgtttgaagtggtcccagggact
gaccaggtagaccatgcagcggctgtgaaggagtacagccgctcctctgccgaccaggag
gagcccctgccgcacgagctccggccctcggcagtcctcagtcggaccatggactacctt
gtgacccagatcatggaccagaaggagggcagcctgcgggactggtatgactttgtatgg
aaccgcacacgaggcatacggaaggacatcacacagcagcacctctgtgaccctctgacg
gtttccctgattgagaaatgtacccggtttcacattcattgtgcccacttcatgtgtgag
gagcccatgtcctcctttgatgccaagatcaacaatgagaacatgaccaagtgtctgcag
agcctgaaggagatgtaccaggatttgaggagcaaaggggtctcttgtgccagcgaggcg
gagttccagggctacaacgttctgctcaatctcaacaagggagacatcctaagagaagtg
cagcagctccatcctgatgtcagaaactctcccgaggtgggcttagctgtccaagctttt
gctgcactgaacagcaataattttgtgaggtttttcaaactggtccagtcggcttcttat
ctgagtggctgcctattacactgttactttaatcagatccgcagggatgctcttcgggca
cttaatgttgcctacacagtgagcactcagcgatcaactgtcttcccgctggacagtgtg
gtgcgtatgctcctgttcagagatggccaagaggccacggacttcctcagcttccatggc
ctcactgtgtctgatggctgtgtcgagctgaatcggtctgcattcctggaaccagaggca
ctgttcaaggccaggaagtcagtatttattgccaagaagctgatggtgtctgttggggaa
attgtgaatggagggccactgcccccagtccctcgccacgctcctgtgtgcagtttcaac
tcccagaacaagtatattggggagagcctggctgcggagctgcctgtcagtcctcagagg
ccctgtgctgatgtagcaggtggcagagaagaggactgtgaggcagagccgagtgtgcca
ctcccagggctccttacacagtctcctcctggccctgtacacgcccttgcctccctgcct
catgccccagcactgactccagccgtggcatccagcctcttccagccctccactcagctg
gagctaatgccaccaaagcctgcacccacatattctgatgcggacctggcagcagtggtg
gatgagctcatccaggaggctcttcagggcgactgtgaggaagttggcattgcgggggcg
gcctatgtgtccgcagccctgggtgtttctaatgctgccatggaggatttgttaacagct
gcaactgtgggcattttgaggcatgttgcagctgaagaagtggctaaggagagggagaga
aaagaggaggagacccggagggctgaagaggaaaggttgaaacaagaaagagagctggtg
ttaactcagctgagccagggcctggctgcagaactgacggaactcatggtgacagagtgt
gtgtgggaaatctgtgccgaggaattgaagtttgcaatggagacagataagagagtccga
atggcacgttgctctgaggatgtctgtgcccacctggtcagcttgtttcttgctgaggaa
attttccagattgcaaaggagacactccaggaacttcagtgcttctgcaagtacctacag
aggtggagggaagccgttgcagcccggaagaaactgaggcgccagatgcgggccttccca
gcagcaccttgctgcgtggatgtgaatgaccccttgcaggcgctggcacccagtgctgag
tgccccattgctgaacagaacctggccaagggcctgctggatcttggccatgcagggaaa
gtgggcatctcctgtaccaggttgcgacggctcagaaatgagacagctcaccagatgaag
gttcagcactttcaccagcagctgctcagcaaggcagcctgggcgcctctggacctgcca
tcctttgtggctgagcacttccctgtgacccgggagcaagtgttttggaaactagtgcta
gtcttacctgatggagaagagcaatctccagggagtcctggcagaatcctaacaaattgg
ctaaaggtcaagttcatgggagatgatggtgtggcgagtgataggtgccgtagtgctggg
gagatggagaccctcgccattgctaacgcactcagcagcaaagggggtcagacagtgtct
gtgaatgtgtgcataaaggtggcccatggtactctcagtgatggcgccctggatgccgtg
gaggcccagaaagacctcttgggagccagtgggctcatgctgctgcttccccccaaagtg
aagaatgaagacacagtagaagaggatgtgtacaggctgtcggccttgctgcagctgaag
cagctcctgcaggctaagcctttccagcctgcactcccgctggtagttcttgttcccagc
tctagacgacatgctcttgggaaagaagtggaagatggtttgatgctacaggatttgatt
tccgctaaattgatttcagattatattgttgttgagatccctgattctgtcaatgattta
caaggcacgttgaaggttactcacgcagtagagtggctggtctctcactgcccccaagcc
ctggacctctgctgccagactctcattcaatatgtcgaggatggccttggccatgagttt
agtggccgttttttccatgatagaaaggagcggcgcctggctggcctggcttcccaggag
cccggcgccattgtggagctcttcaacagcgtcctgcagttcctggcctctgtggtatcc
tcagagcagctttgtaacctctcctggcctgtcactgagtttgctgaggcaggaggcagt
cagcggcttcctcacctgcactggaactccccggagcacctggcctggctaaagcaggct
gtacttgggttccagcttcctcagttggaccttccgcccccaggagctccctggctcccc
atgtgctccatggtcatccagtatgcctcccagatccccagctcacagcagacgcggcca
gtgctccagtcccaggtggaaaacctgctccgcaagacctactgccagtggaagggcaag
agcctctccctgaggccgggggcagggccctcagtcgccgaggttccctgggacgacgtc
attgccttgtgcatcaaccacaagctgagggattggataccccctaagctccctgtcatg
tcagaggcactgagtgaagatggtcagatatgtgtatatttttttaaaaacgatttgaaa
aaatttgatgttcctttgtcatgggaacaagccagagtgcagacacagaaggagctacag
ctgagtcagcgacgtttagggataaagtcttatcatccttctgcaagcaattttcctact
ccattgcttcaagtgcaccagaaagggaagagaagcacagagcgtggcccaaaggggagt
cccagtgcagaggacctgatgcgcggagcctctgcggaggagctcctgatacagtgtctg
tccagcagcctgctgctagagaaggaggagaacaagaggtttgaagatcaacttcagcag
tggttgtctcaggactcaggaacatttacagattccacttcccttcccctctaccttcct
cagacgctagtatctcttcctggtaatattgagtccatggcgaaagcatctacagtaact
ggtccacagactgcaaagacgagggagcagctgcagctctcagagacagtgggcacctct
ctgactgaacggctgaagcacctggaaaggctgatccagagctccagggaagaggaagtt
gcctctgagctccatctttctgcactgttggacatggtagacatctga
DBGET
integrated database retrieval system
