Perognathus longimembris pacificus (Pacific pocket mouse): 125351376
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Entry
125351376 CDS
T08928
Symbol
Lss
Name
(RefSeq) LOW QUALITY PROTEIN: lanosterol synthase
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00100
Steroid biosynthesis
plop01100
Metabolic pathways
Module
plop_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
125351376 (Lss)
Enzymes [BR:
plop01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
125351376 (Lss)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
Motif
Other DBs
NCBI-GeneID:
125351376
NCBI-ProteinID:
XP_048202021
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All DBs
Position
5:413112..439017
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AA seq
734 aa
AA seq
DB search
MTDGTCLRRRRGGPYKTEPATDLGRWRLRNELGRQTWTYFPGEEDAGRDQTALEAHSLGL
DTRNYFKDFPKAQTAREAALNGVTFYVRLQAEDGHWAGDYGGPLFLLPGLLITCHVAHIP
LPAGYREEMVRYLRSVQLPDGGWGLHVEDESTVFGTALNYVALRILGIGPDDPDLVRARN
ILHKKGGAVAIPSWGKFWLAILNVYSWEGLNTLFPEMWLFPSWVPAHPSTLWCHCRQVYL
PMSYCYATRLSASEDPLVQSLRQELYVEDYSSINWPSQRNNVSPGDMYTPHSWLLRVVYG
LLNLYERFHSTTLRQQAVQTLYEHIVADDRFTKSISIGPISKTINMLVRWAVDGPASSAF
QEHISRIPDYLWLGLDGMKMQGTNGSQIWDTSFAIQAMLEAGAHHRPEFLSCLQKAHEFL
RLSQVPDNPPSYQKYYRQMNKGGFPFSTLDCGWIVADCTAEALKSVLLLQEKCPSITEHI
PRERLCDAVAVLLNMRNTDGGFATYETKRGGYLLELLNPSEVFGDIMIDYTYVECTSAVM
QALRHFHEYCPDHRAAEIRETLKQGLEFCRQKQRTDGSWEGSWGVCFTYGTWFGLEAFAC
MGHTYQDGAACAEVSRACNFLLSRQMADGGWGENFESCTQQCYVQSAQSQVHNTCWALMG
LMAVRHPDVAAQERGVRCLLEKQLPNGDWPQDNISGVFNKSCSISYTSYRNVFPIWTLGR
FSNLYPERALAGHP
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacggcacgtgtctgcgtcgtcgtcgaggggggccttataagaccgagcccgcc
actgacctgggccgctggcggctccgcaatgagctgggccggcagacgtggacgtacttc
ccgggggaggaggacgccggtcgggaccagaccgcgctggaggcccactccttgggactg
gacaccaggaattactttaaagactttcccaaagctcaaacagcccgtgaggccgctctg
aatggagtaacgttttatgtgaggctacaggctgaagatgggcactgggcaggtgattac
ggtggcccactcttccttctgccagggctcctgattacgtgccacgtggcacacatcccc
ctaccggctggatacagagaggagatggtgcggtacctgcggtctgtgcagctcccggat
ggcggctggggcttgcacgttgaagacgagtccacggtatttgggactgcactcaactat
gtggctctcagaatcctgggtattggtcctgacgatcctgacctggttcgggctcggaac
atccttcacaagaaaggtggtgcagtcgccatcccctcttgggggaagttctggcttgct
atcctgaatgtttacagctgggaaggcctgaacaccctattccctgagatgtggctgttt
cccagctgggtgcctgcacacccctccactctctggtgccactgccggcaggtctacctg
ccaatgagctactgctatgccaccagattgagcgcctcagaggacccgctagttcaaagc
ctccgccaggagctctatgtggaagactattccagcatcaactggccatcacagaggaat
aatgtgtctccaggtgacatgtacacacctcatagctggcttctgcgtgtggtgtatgga
cttctcaacctgtacgagcgcttccatagtaccaccttgcggcagcaggctgtccagacc
ctgtatgagcatattgttgctgatgaccggttcaccaagagcattagcatcggcccgatc
tcgaaaaccatcaatatgcttgtgcgctgggctgtggatgggccggcctcttctgctttc
caggagcacatctccaggatccccgattacctttggctgggccttgatggcatgaaaatg
cagggcaccaacggctcacagatctgggatacctcgtttgccatccaagctatgctggag
gcaggtgcacaccataggcccgagtttttgtcctgcctgcagaaggcacatgaattcctg
cggctttcacaggtcccagacaaccctcccagctatcagaaatactaccgccagatgaat
aagggtggcttccccttcagtacactggattgtggctggattgttgctgactgcaccgct
gaggccttgaagtctgtgctgctcttgcaggagaaatgtccctctatcactgagcatatc
ccccgagaacgactctgtgatgccgtggctgtgttgttgaacatgaggaacactgatgga
ggatttgccacatatgaaaccaaacgtggggggtacttgctggagctactgaacccctca
gaagtcttcggggacatcatgattgactacacatatgtggagtgcacctcagcagtgatg
caggcactgagacactttcatgagtactgcccggaccacagagcagcagagatcagagag
accctcaagcaaggcctggagttctgccggcagaagcagaggactgatggctcctgggag
ggctcatggggggtttgcttcacctatggcacttggtttggtctggaagctttcgcctgc
atggggcacacctaccaagatggggctgcttgtgcagaggtctcccgggcctgcaacttc
ctcctgtcccgacagatggcagatgggggctggggagagaactttgaatcctgtacgcag
cagtgttacgtgcagagcgcccagtcccaggtccacaacacgtgctgggccctcatgggg
ctgatggctgtcaggcatcctgacgttgcggctcaggagagaggggtcaggtgtttgctt
gagaagcagctccccaacggtgactggcctcaggataacatctctggggtcttcaacaag
tcctgctccatcagctacacaagctacaggaatgtctttcccatctggaccctgggtcgc
ttctccaacctgtaccctgagagagctctggctggccacccttga
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