Perognathus longimembris pacificus (Pacific pocket mouse): 125351423
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Entry
125351423 CDS
T08928
Symbol
U2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125351423 (U2af1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
plop03041
]
125351423 (U2af1)
Spliceosome [BR:
plop03041
]
Complex A
U2 snRNP components
U2 related factors
125351423 (U2af1)
Complex B
125351423 (U2af1)
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GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
125351423
NCBI-ProteinID:
XP_048202127
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All DBs
Position
5:2190883..2202989
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AA seq
238 aa
AA seq
DB search
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ
SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKKHRSRSRSRERRSRSRDRGRGGGGGGGGGGRERDRRRSRDRERSGRF
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtacttggcctccatcttcggcaccgagaaagacaaagtcaactgctcattc
tatttcaaaattggagcatgtcgtcatggagacagatgttctcggttgcacaataaaccg
acctttagccagaccattgccctcttgaacatttaccgtaaccctcaaaactcttcccag
tctgctgacggtttgcgctgtgcggtgagcgacgtggagatgcaggagcactacgatgag
ttcttcgaggaggtctttacggagatggaggagaagtacggggaggtggaggagatgaac
gtctgtgacaacctgggcgaccacctcgtggggaacgtgtacgtcaagttccgccgggag
gaggatgcggagaaggctgtgatcgacctgaacaaccgctggttcaacgggcagccgatc
cacgccgagctgtcgcccgtgaccgacttcagggaagcctgctgccgccagtatgagatg
ggggagtgcacgcggggtggcttctgcaacttcatgcacctgaagcccatctccagagag
ctgcggcgggagctgtatgggcgccggcgcaagaagcatcgatcgaggtcccggtcccgc
gagcgccggtcccggtccagagaccgcggtcgcggtggcggcggaggcggcggcggcggg
ggacgggagcgcgaccggaggcggtcgagagatcgcgagaggtccgggcgattctga
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