Perognathus longimembris pacificus (Pacific pocket mouse): 125351537
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Entry
125351537 CDS
T08928
Name
(RefSeq) amyloid-beta precursor protein isoform X1
KO
K04520
amyloid beta A4 protein
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04517
IgSF CAM signaling
plop04726
Serotonergic synapse
plop05010
Alzheimer disease
plop05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125351537
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
125351537
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
125351537
05022 Pathways of neurodegeneration - multiple diseases
125351537
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
plop01002
]
125351537
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
plop00535
]
125351537
00536 Glycosaminoglycan binding proteins [BR:
plop00536
]
125351537
Peptidases and inhibitors [BR:
plop01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
125351537
Proteoglycans [BR:
plop00535
]
Cell surface proteoglycans
Others
125351537
Glycosaminoglycan binding proteins [BR:
plop00536
]
Heparan sulfate / Heparin
Others
125351537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_amyloid
APP_Cu_bd
Beta-APP
Kunitz_BPTI
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
125351537
NCBI-ProteinID:
XP_048202323
LinkDB
All DBs
Position
5:12109428..12307780
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AA seq
770 aa
AA seq
DB search
MLPGLALLLLAAWTARALEVPTDGNAGLLAEPQIAMFCGKLNMHMNVQNGKWESDPSGTK
TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRGRKQCKTHTHMVIPYRCLVG
EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR
GVEFVCCPLAEESENVDSADAEEDDSDVWWGGADTDYADGSEDKVVEVAEEEDVADIEEE
EADEEEDVEDGDEVEEEAEEPYEEAKERTTSIATTTTTTTESVEEVVREVCSEQAETGPC
RAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLLKTTQEPLPQD
AVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQA
KNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMINDRRRLALDNYLTAL
QAVPPRPHHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER
MNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTET
KTTVELLPVNGEFSLDDLQPWHPFAVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTN
IKTEEISEVKMDAEFRHDSGFEVRHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITL
VMLKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccggtttggcgttgctcctgctggccgcctggacggctcgggcgctggaggtt
cccactgatggcaatgctggcctgctggcagagccccagatcgccatgttctgtggcaaa
ctgaacatgcacatgaatgtccagaatgggaagtgggagtccgatccatctgggaccaaa
acctgtattggaaccaaggagggcatcctgcagtactgccaagaagtctaccctgaactg
cagatcaccaatgtggtagaagccaaccagccagtgactattcagaactggtgcaagcgg
ggccggaagcagtgcaagacccacacacacatggtgattccctaccgctgcctagttggt
gagtttgtaagcgatgccctgctcgttcctgacaaatgcaaattcttacaccaggagcgg
atggatgtttgtgagacccaccttcactggcataccgtcgccaaagagacctgcagtgag
aagagcaccaacttgcatgactatggcatgttgctgccctgtggaatcgacaagttccga
ggtgtggagtttgtgtgctgcccactggctgaagaaagtgagaatgttgactctgctgac
gcagaagaggatgactcagatgtctggtggggcggagcagacacagattatgcagatgga
agtgaagacaaagtagtagaagtagcagaggaggaggatgtggctgatattgaggaagaa
gaagctgatgaggaggaggatgtggaggatggtgacgaggtagaagaggaggccgaagaa
ccctatgaagaggcaaaggagagaaccaccagcattgccaccaccaccaccaccaccaca
gagtctgtggaagaggtggtccgagaggtgtgctcagaacaagccgagacggggccatgc
cgagcaatgatctcccgctggtactttgatgtcactgaagggaagtgcgccccgttcttt
tacggtggatgtggcggcaacaggaacaactttgacacagaagagtactgcatggccgtg
tgtggcagcgtcatgtcccaaagtttactcaagaccacccaagaacctctgccccaagat
gctgttaaacttcctaccacagccgccagcactcctgatgctgttgataagtatctggag
acaccaggtgatgagaatgagcatgcccacttccagaaagctaaagagaggctggaggcc
aagcaccgagagagaatgtcccaggtcatgagagaatgggaggaagctgaacgccaagca
aagaacttgcccaaagctgacaagaaggctgtcatccagcatttccaggagaaagtggag
tcactggaacaagaagcagccaatgagagacagcagctggtggagacacacatggcgaga
gtggaggctatgatcaatgaccgccgccgcctggccctggacaactaccttactgcgctg
caggctgtgcctccacggcctcatcatgtgttcaacatgctgaagaagtacgtccgtgct
gaacagaaagacaggcagcataccttaaagcattttgaacacgtacgcatggtggatccc
aagaaagctgctcagatccggtcccaggtgatgacacacctccgcgtgatctatgagcgc
atgaatcagtctctgtctctgctctacaatgtccccgctgtggctgaagaaattcaggat
gaagttgatgagctgcttcagaaagagcaaaactactcggatgatgtcttggccaacatg
atcagtgagccaagaatcagttacggaaacgatgctctcatgccatctttgacggaaacc
aagaccaccgtggagcttcttcctgtgaatggcgagtttagcctggatgatctccagccg
tggcatcctttcgcggtggactcggtgccagccaatacagaaaatgaagttgagcctgtt
gatgcgcgccctgctgctgaccgcggactgaccactcgaccaggttctgggttgacaaac
atcaagacagaagagatctcagaagtgaagatggatgcggagttccgacatgactcagga
tttgaagttcgtcatcaaaaactggtgttctttgcagaagatgtgggttcaaacaaagga
gccatcattggactcatggtgggtggtgttgtcatagcgacggtgattgtcatcacctta
gtgatgctgaagaagaaacagtacacatccatccatcatggcgtcgtggaggttgatgct
gcagtgacacctgaggagcgccacctctccaagatgcagcagaatggctacgagaatcca
acttacaagttcttcgagcagatgcagaactag
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