Perognathus longimembris pacificus (Pacific pocket mouse): 125351654
Help
Entry
125351654 CDS
T08928
Symbol
Bbx
Name
(RefSeq) HMG box transcription factor BBX isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125351654 (Bbx)
Transcription factors [BR:
plop03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
125351654 (Bbx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2028
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
125351654
NCBI-ProteinID:
XP_048202503
LinkDB
All DBs
Position
5:36767690..36991865
Genome browser
AA seq
967 aa
AA seq
DB search
MKGSNRNKDSTEEGTGKRPKRKCLQWHPLLAKKLLDFSEEEEEEDEEEDIDKVQLLGADG
LEQDVGETEDDESPEQRTRRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADWWAILD
PKEKQKYTDMAKEYKDAFMKANPGYKWCPTTNKPVKSPTPTVNPRKKLWAFPPDSSRDLP
SPKKAKTEEMPQLNFGMADPTQMGGLSMLLLAGEHALGTPEISSGTCRPDVSESPELRQK
SPLFQFAEISSSTSHPDAPTKQCQASALFQFAEISSHTSQLGGTESVKRCGKSALFQLAE
MCLASEGVKMEETKEWKKAKESDGGRITELEKGQEEREIKMEKTDEDGLQKEVEFKKSFK
DNVRETMELRNFEELQMDDVMAIKMEDPKEIRKEELEEDQKYSHFPDFSYSASSKIIISD
VPNRKDHMCHPHGIMIIEDPTALNKPEKLKKKKKKSKVDRHGSDKSTPKKTCKKRQSSES
DIESVIYTIEAVAKGDWGVDKFGDTPRKKVRTSSSGKGSILDAKPPKKKVKSREKKMSKE
KSSDITKESRPPDFISISASKSMSGEVPEGIKAEPLTPTEDVLPPNLSGQAKPEDNECHR
KIETCGSRKSERSCKGALYKTLVSEGMLTSLRANVDRGKRSSGKGNSSDHEGCWSEESWT
FNQSGTSGSKKFKKTKPKEDSLLGSAKLDEEFEKKFNSLPQYNPVTFDRKCVSIPRKKKK
TGNMSSEPTKTSKGLLIWENNVVSRSSKMDEERNKVDLLTGPFQSQKKNLFHKIVSKYKH
KKEKPNVPEKGSGDKWSHKQFFLDAIHPTEAIFSEDKNTTEPALKVKNALPTFNTPEPTT
MQEPLVGSQKRKARKTKITHLVRTADGRVSPAGGTLDDKPKEQLQRSLPKATEKDCNDDC
VHRAEAGETRSSTPEMPAVSAFFSLAALAEVAAMENVHRGQRSTPLTHDGQPKEMPQAPV
LISCADQ
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcagtaatagaaataaagattcaacagaagaagggactggaaaacgaccgaaa
cggaagtgtcttcagtggcatccattgctagcaaagaaacttctggacttttcagaagag
gaggaagaagaagacgaagaggaagatattgacaaagttcaacttcttggggccgatggc
ctagagcaagatgttggtgagactgaagatgatgaatcaccagaacagcgcaccaggaga
ccaatgaatgcatttcttttattttgcaaacgccatcgctcccttgtccgtcaagaacac
cctaggcttgataaccgaggtgctaccaagatactagctgattggtgggctattcttgat
ccaaaggaaaagcagaaatatacagacatggctaaggagtataaagatgcatttatgaaa
gcaaatcctggctacaaatggtgtcctaccacaaacaagcctgtgaaatcaccaacaccc
actgtcaatccacgaaagaagctttgggcctttccacccgactcttcaagagatctgcca
agccctaagaaagcaaagactgaagaaatgcctcagcttaacttcggaatggctgatcct
acccaaatgggagggctgagcatgctgctgttagctggagaacatgctcttggaacacca
gagatatcctctggcacatgcagacctgatgtttcagaatcccctgaattacggcagaag
tcaccattgtttcagtttgccgagatatcttcaagtacatcccaccctgacgctcctaca
aagcagtgtcaagcatcagccttgtttcagtttgcagagatctcctcacacacttcccag
ttgggtggcactgaatctgtgaaacgctgtgggaagtctgcgctctttcaactggcagag
atgtgcctagcttcagaaggagtaaaaatggaagaaacaaaagaatggaagaaagcaaaa
gaatcagatggtggaagaattacagaattggagaagggacaggaagaaagagaaataaaa
atggagaaaacagatgaagatgggttacagaaggaagtagaatttaaaaaatcatttaaa
gacaatgtaagagagactatggaattgagaaattttgaagagctacaaatggatgatgta
atggctataaaaatggaagaccccaaagaaattagaaaggaagaattagaagaagaccaa
aaatatagtcacttccctgatttttcttattctgccagtagcaagataataataagtgat
gttcccaatagaaaggaccacatgtgccaccctcatgggattatgatcattgaggatccc
actgcactaaataaaccggaaaagctgaaaaagaaaaagaagaaaagcaaggtggatcga
catggaagtgataaatccacacctaagaagacttgcaaaaagaggcagtcttctgaatct
gacattgagagtgtcatctataccattgaagctgttgcgaaaggagactggggtgttgac
aagtttggagacacccctagaaagaaggtccgtacttcctcaagtggcaagggaagcatt
ttggatgctaagccaccaaagaaaaaagtgaaatcaagagagaagaaaatgtcaaaggag
aaatcctcagacatcaccaaagagtcaagacctccagatttcattagtatatctgccagt
aagagcatgtctggtgaggtgccagagggtataaaagcagaaccattgacccccacggaa
gatgtactaccacctaacctttccggacaagccaagccggaggacaatgaatgtcacaga
aaaatagagacgtgtggctccaggaaatccgagaggtcttgcaaaggtgctctttataaa
accctggtgtctgagggcatgctcacttctctgcgagctaatgttgacagaggtaaacga
agctcaggaaaaggaaactcctctgatcatgaagggtgttggagtgaggaaagctggaca
tttaaccagagtgggaccagtgggagcaagaagttcaagaagacaaagccaaaggaagac
tctctgcttggctcagcaaaattggatgaagaatttgaaaagaaattcaacagcctccct
cagtataatcctgttacatttgaccggaaatgtgtatcgattccaagaaaaaagaagaag
actggaaacatgtcctcagaaccaactaaaaccagcaaaggtttgctcatctgggaaaat
aatgttgtgtcgagatcttccaagatggatgaggaaagaaataaagtagacttgttgaca
ggtcctttccagtctcagaaaaagaacttattccacaaaattgtcagcaaatataagcac
aaaaaggagaagcctaatgttccggaaaaaggaagtggggataaatggtcacacaagcaa
ttcttcttggatgccattcaccctacagaagccatattttcagaagacaaaaataccaca
gagcctgctcttaaggttaaaaatgccctacccactttcaacactccagagccaaccaca
atgcaagagcctctggtgggcagccagaagagaaaagcaagaaaaaccaagatcacacat
cttgtcaggactgctgatggccgagtatcaccagcaggaggtactttggatgacaaacca
aaggaacaactgcagaggagtctccctaaagcaactgagaaagactgcaatgacgattgt
gtacacagagctgaggccggggagacacggagcagcacaccagaaatgcctgctgtgtct
gcgttctttagccttgctgcactggctgaggtagcagccatggagaatgtgcacagaggt
cagaggtcaactccgctcacccacgatggacagccaaaagaaatgccacaggctcctgta
cttatttcttgcgctgaccagtga
DBGET
integrated database retrieval system
