Perognathus longimembris pacificus (Pacific pocket mouse): 125351659
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Entry
125351659 CDS
T08928
Symbol
Cd47
Name
(RefSeq) leukocyte surface antigen CD47 isoform X1
KO
K06266
CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04148
Efferocytosis
plop04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125351659 (Cd47)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125351659 (Cd47)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plop02000
]
125351659 (Cd47)
04515 Cell adhesion molecules [BR:
plop04515
]
125351659 (Cd47)
04090 CD molecules [BR:
plop04090
]
125351659 (Cd47)
Transporters [BR:
plop02000
]
Other transporters
Pores ion channels [TC:
1
]
125351659 (Cd47)
Cell adhesion molecules [BR:
plop04515
]
Immunoglobulin superfamily
Other
125351659 (Cd47)
CD molecules [BR:
plop04090
]
Proteins
125351659 (Cd47)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CD47
V-set_CD47
FIIND
Motif
Other DBs
NCBI-GeneID:
125351659
NCBI-ProteinID:
XP_048202517
LinkDB
All DBs
Position
5:complement(37230732..37281662)
Genome browser
AA seq
321 aa
AA seq
DB search
MWPLVAALLLGSSCIGSAQLLLDKTRSVEYTTCNETVVIPCFVTNVGAQNPGEMYVKWKF
NRTYIFIYDGNRNNSTADSNFSSAKISVSELIKGDASLKLDKADAVVGNYTCEVTELSRE
GETVVELKYRVVSWFSPNENILIVIFPILAILLFWGQFGLLTLKYKSNRTNRKIILLLIA
GVVLTTIVIVGAILFIPGEYSVKNACGLGLIVISTGMLVSLQYNVFMAAFGMTSFTIAIL
ITQVLGYVLAVVGLCLCILACVPVHGPLLISGLGIIALAELLGLVYMKFVASNQRTIQPP
RKAVEEPLNAFKESKGMMNDE
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtggcccttggtggcagcgctgttgttgggatcgtcgtgcatcggttcagctcagcta
ctattggataagaccagatctgtagaatacaccacttgcaatgaaaccgttgtcatcccg
tgctttgtcactaatgtgggagcacaaaaccctggggaaatgtatgtgaagtggaaattt
aacagaacatacattttcatctatgatggaaatagaaacaattctactgcagatagcaac
ttttccagtgccaaaatctcagtctcagaattaatcaaaggagatgcatctttgaagctg
gataaggctgatgctgttgtaggaaactacacatgtgaagtaacagaattaagtagagaa
ggcgaaacagttgtcgaactgaagtatcgtgttgtttcctggttttctccaaatgaaaat
atcctcattgttattttcccaattttggctatacttctgttctggggacagtttggtctt
ttaacacttaaatacaaatccaatcgtacaaataggaaaatcatcctcttactcattgct
ggagtagtactcaccaccattgttattgttggagccattctcttcatcccaggagaatat
tcagtaaagaatgcatgtggccttggtctcattgtaatttctactggaatgttagtatca
cttcagtacaatgtatttatggcagcttttgggatgacctccttcaccattgctatattg
atcactcaggtgctgggctatgtgcttgctgtggttggattgtgtctctgtatcttggca
tgtgtaccagtgcatggcccactattgatttcaggtttgggcatcatagctctagcagaa
ttactcggactagtttatatgaagtttgtggcttccaatcagagaactatacaacctcca
aggaaagctgtagaggaaccccttaatgcatttaaagaatcaaaaggaatgatgaacgat
gaataa
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integrated database retrieval system
