Perognathus longimembris pacificus (Pacific pocket mouse): 125351665
Help
Entry
125351665 CDS
T08928
Symbol
Dscam
Name
(RefSeq) Down syndrome cell adhesion molecule
KO
K06767
Down syndrome cell adhesion molecule
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plop04515
]
125351665 (Dscam)
Cell adhesion molecules [BR:
plop04515
]
Immunoglobulin superfamily
DSCAM family
125351665 (Dscam)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
Ig_5
C2-set_2
Pur_ac_phosph_N
Sp38
C1-set
Interfer-bind
V-set_CD47
fn3_2
ChitinaseA_N
DUF6377
ARM_TT21_4th
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
125351665
NCBI-ProteinID:
XP_048202531
LinkDB
All DBs
Position
5:3170865..3476680
Genome browser
AA seq
2050 aa
AA seq
DB search
MEVGGPISPPPPPQEANLLMLGHDEVMEGAAYGLFYVGRRQCLLCLLGCVFTEEAHSSLY
FVNASLQEVVFASTSGTLVPCPAAGVPPVTLRWYLATGEEIYDVPGIRHVHPNGTLQIFP
FPPSSFSTLIHDNTYYCTAENPSGKIRSQDVHIKAVLREPYTVRVEDQKTMRGNVAVFKC
IIPSSVEAYITVVSWEKDTVSLVSGSRFLIPSTGALYIKDVQNEDGLYNYRCITRHRYTG
ETRQSNSARLFVSDPANSAPTILDGFDHRKAMAGQRVELPCKALGHPEPEYRWLKDNMPL
ELSGRFQKTVTGLLIENTRPSDSGSYVCEVSNRYGAAKVIGRLYVKQPLKATITPRKVKS
SVGSQVALSCSVTGTEGQELSWYRNGEILNPGKNVRITGLNHENLIMDHMVKSDGGAYQC
FVRQDRLSAQDYVQVVLEDGTPKIISAFSEKVVSPAEPVSLLCSVKGTPLPTITWTLDED
PILKGGGHRVSQMITSEGNVVSYLNISSSQVRDGGMYRCTANNSAGVVLYQARINVRGPA
SIRPMKNITAIAGRDTYIHCRVIGYPYYSIKWYKNSNLLPFNHRQVAFENNGTLKLSDVQ
KEVDEGEYTCNVLVQPQLSTSQSVHVTVKVPPFIQPFEFPRFSIGQRVFIPCVVVSGDLP
ITITWQKDGRPIPASLGVTIDNIDFTSSLRISNLSLMHNGNYTCIARNEAAAVEHQSQLI
VRVPPKFVVQPRDQDGIYGKAVILNCSAEGYPVPTIVWKFSKGAGVPQFQPIALNGRIQV
LSNGSLLIKHVVEEDSGYYLCKVSNDVGADVSKSMYLTVKIPAMITSYPNTTLATQGQKK
EMSCSAHGEKPIIVRWEKEDRIINPEMARYLVSTKELGEEVISTLQILPTVREDSGFFSC
HAINSYGEDRGIIQLTVQEPPDPPEIEIKDVKARTITLRWTMGFDGNSPITGYDIECKNK
SDSWDSAQRTKDVSPQLNSATIIDIHPSSTYSIRMYAKNRIGKSEPSNELTITADEAAPD
GPPQEVHLEPISSQSIRVTWKAPKKHLQNGIIRGYQIGYREYSTGGNFQFNIISIDTTGD
SEVYTLDNLNKFTQYGLVVQACNRAGTGPSSQEIITTTLEDVPSYPPENVQAIATSPESI
SISWSTLSKEALNGILQGFRVIYWANLMDGELGEIKNVTTTQPSLELDGLEKYTNYSIQV
LAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKAAAASASMVFVSWLPPLKLNGIIRKYTVF
CSHPYPHGKLVISEFEASPDSFAYRIPNLSRNRQYSVWVVAVTSAGRGNSSEIITVEPLA
KAPARILTFSGTVTTPWMKDIVLPCKAVGDPSPAVKWMKDSNGTPSLVTIDGRRGIFSNG
SFVIRTVKAEDSGYYSCVANNNWGSDEIILNLQVQVPPDQPRLTVSKTTSSSITLSWLPG
DNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLENLKCGTWYKFTLTAQNGVGPGRI
SEIIEAKTLGKEPQFSKEQELFASINTTRVRLNLIGWNDGGCPITSFTLEYRPFGTLVWT
TAQRTSLSKSYILYDLQEATWYQLQMRACNSAGCAEKQANFATLNYDGSTIPPLIKSVVQ
SEEGLTTNQGLKMLVTISCILVGVLMLFVLLLVLRRRRREQRLKRLRDAKSLAEMLMSKN
TRTSDTLSKQQQTLRMHIDIPRAQLLIEERDTMETIDDRSTVLLTDADFGEAAKQKSLTV
THTVHYQSVSQATGPLVDVSDARPGTNPTTRRNAKAGPTARNRYASQWTLNRPHPTISAH
TLTTDWRLPTPRATGSVDKESDSYSVSPSQDTDRARSSMVSTESASSTYEELARAYEHAK
MEEQLRHAKFTVTECFISDTSSEQLTAGTNEYTDSLTSSTPSESGICRFTASPPKPQDGG
RVMNMAVPKAHRPGDLIHLPPYLRMDFLLNRGAPGTSRDLSLGQACLEPQKSRTLKRPAV
LEPIPMEASSSASSTREGPSWQQGAVATLPQREGAELGPAAKMSSSQESLLDSRGHLKGN
NPYAKSYTLV
NT seq
6153 nt
NT seq
+upstream
nt +downstream
nt
atggaggtaggaggccccatctcgcccccacctccaccccaggaagcaaatctgctgatg
ttgggacacgatgaagttatggagggtgcagcgtacggcctgttttatgtgggcaggagg
caatgccttctgtgtctccttggttgcgttttcactgaggaagctcactccagcctctac
tttgtcaatgcatcgctgcaagaggtagtgttcgccagtacctcggggacgctggtgccc
tgcccggccgcaggcgtccctcccgtgactctccgatggtacctagccacgggcgaggag
atctacgatgtccccgggatccgccacgtccaccccaacggcactctccagatcttcccc
ttccctccttcgagcttcagcaccttaatccacgataacacttactattgcacagccgaa
aatccttcagggaaaattagaagtcaggatgtccacatcaaggctgttttacgggagccc
tatacagtccgtgtggaggaccagaaaaccatgagaggcaatgtcgcggtcttcaagtgc
attatcccctcctcggtggaggcgtacatcactgtcgtctcctgggagaaagacactgtt
tcacttgtctcaggatctagatttctcatcccatccacgggagccttgtatattaaagat
gtacagaatgaagatggattgtataactaccgctgtattacgcggcacaggtacactgga
gagacgaggcagagtaacagtgcgagactctttgtatcagatccagcaaactccgcccca
accatcctggacgggtttgaccatcgcaaagccatggccgggcagcgcgtggagctgcct
tgcaaagcgctcgggcacccagagcccgaataccgttggctgaaggacaacatgcccctg
gaactctccgggaggttccagaaaacagtgacggggctgctcatcgagaacacccggccc
tccgactcaggcagctacgtgtgcgaggtgtccaaccgctacggggccgcgaaggtgata
ggccgcctgtacgtgaaacagccgctgaaggccaccatcacccccagaaaggtgaagagc
agcgtggggagccaggtggccctgtcctgcagcgtgacgggcaccgagggccaggagctc
tcctggtaccgcaacggcgagatcctcaaccccgggaagaacgtgcggatcacgggcctc
aaccacgagaacctgatcatggatcacatggtcaagagcgacgggggcgcctaccagtgc
ttcgtgcgccaggacaggctgtccgcccaggactacgtgcaggtggttctcgaagacggc
acccccaaaatcatctcggccttcagcgagaaggtggtgagccccgcggagcccgtgtcc
ctcctgtgcagcgtgaaggggacgccgctgcccaccatcacctggaccctggacgaggac
cccatcctgaagggcggtggccaccgcgtcagccagatgatcacgtccgagggcaacgtg
gtcagctacctgaacatctccagctctcaggtccgggatggcggcatgtaccgctgcacc
gccaacaactccgccggagtcgtcctctaccaggctcgaataaacgtaagagggcccgcc
agcatccggcccatgaagaacatcacggccatcgccggacgggatacgtacatccactgc
cgtgtgattggctatccctactactccatcaagtggtacaagaactcgaacctgcttccc
tttaaccaccgccaggtggcatttgagaacaacggcactctgaagctctcggacgtccaa
aaagaggtggacgagggcgagtacacgtgcaacgtgctggtgcagccgcagctctccacc
agccagagcgtccacgtgacggtgaaagtcccacctttcatccagcccttcgagttccca
cgattctccatcggccagcgggtcttcatcccgtgcgtggtggtctcgggggacttgccc
atcaccatcacctggcagaaggacggccggccgatccccgccagcctcggggtgaccatc
gacaacatcgacttcaccagctccctgcgcatctccaacctctccctgatgcacaacggg
aactacacgtgcatcgcgcgcaacgaggcggctgccgtggagcatcagagccagctcatc
gtgagagtgcctcccaagttcgtggttcagccccgggaccaggacggcatctacggcaag
gcggtcatcctcaactgctcggcggagggctaccccgtgcccaccatcgtgtggaagttc
tctaaaggtgctggggtcccccagttccagccgattgccctcaatggccggattcaggtc
ctcagcaacgggtcactgttgatcaagcacgtcgtggaagaagacagcggctactacctc
tgcaaggtcagcaatgatgtgggcgccgacgtcagcaagtccatgtacctcacggtgaaa
attcctgccatgatcacctcctatccaaacacgaccctggccactcagggtcagaagaag
gaaatgagctgttcagcccatggagaaaagcccattattgtccgctgggagaaagaagac
aggatcattaacccggagatggcccgctatcttgtgtccaccaaggagctgggcgaggag
gtgatttctaccctacagattttgccaactgtgagagaagattctggcttcttctcctgc
cacgctatcaattcctacggggaggaccgcggaatcattcagctcacagtgcaagagccc
ccagatcctcctgaaattgagatcaaagatgtcaaagcacgcacaattacactcaggtgg
accatgggctttgacggcaacagccccatcaccggctatgatattgaatgcaaaaataaa
tcagactcgtgggattctgctcagagaaccaaagatgtttcccctcagctgaactcggcc
accatcattgatatccacccttcctccacctacagcatccgcatgtacgccaagaaccgg
atcggcaagagcgagcccagcaacgagctcaccattacagcagatgaagcagctcccgac
ggtccgcctcaggaagttcacctggagcccatctcctctcagagcatcagggtcacctgg
aaggctcccaagaaacacttgcagaacggaatcatccgtggctaccagatcggttaccga
gagtacagcacggggggcaacttccagttcaacatcatcagcatcgacaccaccggggac
agcgaggtgtacacgctggacaatctcaacaagttcacccagtacggcctggtggtgcag
gcttgcaaccgggccggcacggggccttcttctcaggaaatcatcaccaccaccctcgag
gatgtgcccagttacccccctgaaaacgtccaagccatagcaacatccccggaaagcata
tccatctcctggtccacgctttccaaagaagccctgaacggaattctccaggggttcagg
gtcatctactgggccaacctcatggacggagagctgggcgagatcaagaatgtcaccacc
acgcagccgtcgctggagctggacgggctggagaagtacaccaactacagcatccaggtg
ctggccttcacgcgggcgggggacggagtccgcagcgagcagatcttcacgcgcaccaag
gaggatgttccaggtcctccggcgggcgtgaaggctgcggcggcctcggcctccatggtc
ttcgtgtcctggctgcccccgctcaagctgaacggcatcatccggaagtacaccgtgttc
tgctcccacccctacccccacggtaagttggtgatcagcgagttcgaggcctcccccgac
tcgtttgcctacagaattcccaacctgagccggaaccgtcagtacagcgtgtgggtggtg
gcggtcacctctgccgggcgcggcaacagcagcgagatcatcacggtggagccgctggct
aaagctcctgcgcgcatcctcaccttcagcgggacggtgaccactccgtggatgaaggac
atcgtcctgccctgtaaagctgtcggggacccctcgccggcggtgaagtggatgaaggac
agtaacgggacgcccagcctggtgacgattgacggacgcaggggcatcttcagcaacggc
agcttcgtcatccgcacggtgaaagccgaggactccggctactacagctgcgtcgccaac
aacaactggggatccgacgaaatcattctgaatttacaagtgcaagttccacccgaccag
cctcggcttacggtttccaaaacaacgtcttcctccatcaccctttcttggcttcccgga
gacaacgggggcagctccatcagagggtacatcctgcagtactcggaggacaacagcgag
cagtggggcagcttccccatcagccccagcgagcgctcctaccgcctggagaacctgaaa
tgcgggacctggtacaagttcaccctcaccgcccaaaacggagtggggcccgggcgcatc
agcgagatcatagaggccaagacgctggggaaagagccccagttctccaaggagcaagaa
ctcttcgccagcatcaacaccacgcgcgtgcggctgaacctcatcggctggaacgacggc
ggctgccccatcacctccttcacgctcgagtaccggcccttcgggaccctggtgtggacc
acggctcagcgcacctccctctccaagtcctacatcctgtacgacctgcaggaagccacc
tggtaccagctgcagatgcgggcgtgcaacagcgccggctgcgccgagaagcaggccaac
ttcgccacgctcaactacgacggcagtacaattcctccactcattaagtcagttgtccag
agcgaagagggtctgacgaccaaccaagggctcaagatgctggtgaccatctcctgcatc
ctggtgggggtcctgatgctcttcgttctcctgctggtcctgcggaggaggaggcgcgag
cagaggctgaagcggctccgagatgcaaagagcttagctgaaatgctcatgagtaagaat
actcgaacttcagacacgttaagcaagcaacagcaaacgctgagaatgcacatcgacata
ccccgggctcagcttctgatcgaggagagggacaccatggagaccatagatgaccgctcc
accgtgctcctgaccgacgccgactttggagaagcagcgaaacagaagtccctgacggtg
acccacacggtccactaccagtcggtgtcgcaggccactgggcccctggtggacgtctca
gacgctcggccgggaaccaatcccaccaccaggcggaacgccaaggcggggcccacggcg
aggaaccggtacgccagccagtggaccctcaacagaccgcaccccaccatctccgcgcac
accctcaccacggactggaggctgccgacgcccagggccacggggtccgtggacaaggag
agtgacagctacagtgtcagcccgtcgcaagacacagaccgagcgaggagcagcatggtg
tccacggagagcgcctcctccacctacgaggagctggcccgggcctacgagcacgccaag
atggaggagcagctgcggcacgccaagttcaccgtcaccgagtgcttcatctcggacacc
tcctccgagcagctgacggcagggacaaacgagtacacggacagtctgacctccagcacc
ccctcggagtcgggcatctgcaggttcaccgcgtctcctcccaaacctcaggacggaggg
agagtcatgaacatggccgtcccaaaggcacaccggccaggcgacctcatccacctgcct
ccgtaccttcgaatggacttcttgttgaaccggggtgctcccggcaccagcagggacctg
agtttaggacaagcgtgcttggaacctcagaaaagtcggaccctgaagcgccccgcggtc
ctggagcccatcccgatggaggcctcctcctccgcgtcctccacgagagagggaccctcg
tggcagcagggggccgtggccacattacctcagcgagagggagctgagctgggaccggca
gccaagatgagcagctcccaagaatccttgctggactcccggggccatttgaaaggcaac
aatccctacgccaagtcctacaccctggtataa
DBGET
integrated database retrieval system
