Perognathus longimembris pacificus (Pacific pocket mouse): 125351694
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Entry
125351694 CDS
T08928
Symbol
Boc
Name
(RefSeq) brother of CDO isoform X1
KO
K20020
brother of CDO
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04340
Hedgehog signaling pathway
plop04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
125351694 (Boc)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
125351694 (Boc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plop04515
]
125351694 (Boc)
Cell adhesion molecules [BR:
plop04515
]
Immunoglobulin superfamily
Other
125351694 (Boc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
ISET-FN3_linker
Ig_DSCAM-DSCAML_C
V-set
Pur_ac_phosph_N
C2-set_2
Ig_5
Ig_4
C1-set
CR_prot_dom_plant
Y_Y_Y
PRIMA1
Motif
Other DBs
NCBI-GeneID:
125351694
NCBI-ProteinID:
XP_048202572
LinkDB
All DBs
Position
5:40789434..40869461
Genome browser
AA seq
1091 aa
AA seq
DB search
MQRGTMTAHSRRRPAVSLSWLLLATAGCLADLDEVPRVTVQPASTVQKLGGTVILGCVVE
PAWVNVTWRLNGKELNGSDDNLGVLLSRGTLVITALNNHTVGRYQCVARMPAGAVASVPA
TVTLANLQDFKLDVQHVIEVDEGNTAVIACHLPESHPKAQVRYSVKQEWLEASRDNYLIM
PSGNLQIVNASQEDEGMYKCAAYNPVTQEVKTSGSSDRLRVRRSTAEAARIIYPLEAQTV
IVTKGQSLILECVASGIPPPRVTWAKDGSNIAGYNKTRFLLSNLLIDPTSEEDSGTYHCM
ANNGVGEAGAAVILYNVQVFEPPEVTVELSQLVIPWGQSAKLTCEVRGNPPPSVLWLRNA
VPLTASQRLRLSRRALRVVSVGPEDEGVYQCMAENEVGSAHAVVQLRTARPGTTLRPWRE
AKPASSTPPALPSRSRGPDQMLRERPGLSKPLTSVQPASLQCLGEKGHVTPAEAPIILSS
PRTSKTDSYELVWRPRHEGGSRAPILYYVVKHRKQVTNASDDWTISGIPANQHRLTLTRL
DPGSLYEVEMAAYNCAGEGQTAMVTFRTGRRPKPEIIASKEQQVQRDDPGAGPQSSSQPD
HGRLSPPEAPDRPTISMASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSAI
PPSRLSVEIAGLEKGTSYKFRVRALNMLGESEPSAPSRPYVVSGYSGRVYERPVAGPYIT
FTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDRYWHSISH
LQPETSYDIKMQCFNEGGESEFSNVMICETKARKSSGQPGRLPPPTLAPPQPPPPETIER
PMGTGAMVARASDLPYLIVGVVLGSIVLIIVTFIPFCLWRAWSKQKHTTDLGFPRSALLS
PSCQYTMVPLGGLPGHRANGQSYFGGISGRTCASGIHVSRGCPGAAVGCTGMKPQQHCPG
ELPQQQDAADGLLRQTILGNGYESQSHQATRGPSSSPDEGSFLYTLPDDSTHQLLQPQDC
CHLSEPATTTVHQAGVRKESERLGLEAVWDPPFHSGPPCCLGLVPVEEVDIPDPCQVGGG
DWCPRRPSGPT
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgagggacgatgacagcacacagcagacggaggccggcggtgtcactgtcctgg
ctcctcttggctacagcaggctgccttgcagatttggatgaggtccctcgggtcactgtc
cagcctgcatccactgtccagaagcttggtggaactgtgattctaggctgtgtcgtggag
ccggcttgggtgaatgtaacatggcgcttgaacgggaaggagctgaatggctcggatgat
aatctgggtgttctactcagccggggaacccttgtcatcactgccctcaacaatcacact
gtgggacggtaccagtgtgtggcccggatgcctgcaggggctgtagccagtgtgccagcc
acagtaacactagccaatctccaggacttcaagttagatgtgcagcatgtcattgaagtg
gatgagggaaatacagccgtcattgcctgccacctgcctgagagccaccccaaagcccag
gtccgttacagcgtcaaacaagagtggctggaagcctccagagacaactacctgatcatg
ccatcagggaacctccagattgtcaatgccagccaggaggacgaaggcatgtacaaatgt
gctgcctacaacccggtgacccaggaagtgaagacctccggctctagtgacagactgcgc
gtgcgccgctccactgcagaagctgcccgcatcatttaccctctggaggcgcagactgtc
attgtcaccaaaggccagagtctcatcctggagtgtgtggccagtgggatcccaccccct
cgagttacctgggccaaggacgggtccaacattgctggctacaacaagactcgcttcctg
ttgagcaacttgctcatcgaccccaccagtgaggaggactcgggcacctaccactgcatg
gccaacaacggggttggagaggctggtgcggccgtcatcctctacaatgtccaggtgttt
gagccccccgaagtcactgtggagctgtcccagctggttatcccgtgggggcagagtgcc
aagctcacctgtgaggtgcgtgggaaccctcctccctccgtgctatggctgaggaacgct
gtgccactcacggccagccagcgcctccggctgtcccgcagagccctgcgcgtggtgagc
gtggggcccgaggatgaaggcgtctatcagtgcatggctgagaatgaggtcgggagcgcg
cacgctgtggtccagctgaggacagcccggccaggcacgacactgagaccctggagggag
gctaagccagccagttccacccctcctgccttaccctccagatccagaggccctgaccag
atgctgagggagcgacccgggctctccaagccgctgacctcagtacagcctgcttctctg
cagtgtctgggggagaaggggcacgtgaccccagctgaggctcccatcatcctcagctct
cctcggacctccaagactgactcttatgagctggtgtggcggcctcggcacgagggcggc
agccgggcacccatcctctactacgtggtgaaacaccgaaagcaggtcacaaacgcttct
gatgattggaccatctccggcatcccagccaatcagcaccgcctgaccctcaccaggctt
gaccctgggagtttgtatgaagtggagatggcagcttacaattgtgctggcgaaggccag
accgccatggtcacctttcgaactggacggcgacccaaacctgagatcatagccagcaag
gaacagcaagttcagagagatgaccctggagctggtccccagagcagcagccagccggac
catggccgcctctctcccccagaagctccagacaggcctaccatctccatggcctcagaa
acgtcggtgtatgtcacctggatcccccgtgggaacggcggcttcccaatccagtccttc
cgagtggaatacaagaagctgaagaaagtaggcgactggattctggccaccagtgccatt
cctccatcgcggctctctgtagagatcgcaggtcttgagaaaggcacctcttataaattc
cgagtgcgagctctgaatatgctgggggagagcgagcccagtgccccatcgaggccctac
gtggtgtctggctacagcggccgtgtgtacgagaggccagtggcgggcccttatatcacc
ttcaccgacgcggtcaatgagaccaccatcatgctcaagtggatgtacatcccagcaagt
aacaacaacacccccatccacggcttttacatctactaccgacccacagatagtgacaat
gacagcgactacaagaaggacatggtggaaggggacaggtactggcactccatcagccac
ctgcaacccgagacctcctatgatatcaagatgcagtgtttcaatgaaggaggggagagc
gagttcagcaacgtgatgatctgcgagaccaaagctcgcaagtcttctggtcaacctggc
cgactcccaccgcccactctggccccaccacaacctccacccccagaaaccatagagcgg
ccaatgggcacgggggccatggtagcacgtgctagtgacttgccctatctgattgttggg
gttgtcctgggctcaatcgtcctcatcatcgtcaccttcatccctttctgcctgtggaga
gcatggtccaagcaaaaacatacaaccgatctgggttttcctcgaagtgcgcttctgtcc
ccttcctgccagtacactatggtgcctttgggaggactcccgggccaccgagccaatggc
caatcttacttcggtggcatcagtggccggacctgtgctagtgggatacatgtgagcagg
ggctgcccgggggctgcagttggctgcacaggcatgaaaccacaacagcactgccccggg
gagctgcctcagcagcaggacgccgccgacggcttactgaggcaaaccatccttggcaat
gggtatgaatcccagagccaccaggctaccaggggtcccagttctagccccgatgagggc
tctttcttgtatacactgcctgatgactccacacaccagctgctccagcctcaagactgc
tgccacctctcagagccagcgaccaccaccgttcaccaggcaggcgtgaggaaagagtca
gagcgccttgggctggaagctgtgtgggaccctccatttcactcagggcccccatgctgc
ctgggccttgttccagttgaagaggtggacattcctgacccctgccaagtgggtggagga
gactggtgtccccggcggccctcggggcctacataa
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