Perognathus longimembris pacificus (Pacific pocket mouse): 125351708
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Entry
125351708 CDS
T08928
Symbol
Zbtb20
Name
(RefSeq) zinc finger and BTB domain-containing protein 20 isoform X1
KO
K10501
zinc finger and BTB domain-containing protein 20
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125351708 (Zbtb20)
04121 Ubiquitin system [BR:
plop04121
]
125351708 (Zbtb20)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
125351708 (Zbtb20)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
125351708 (Zbtb20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
BTB
zf-H2C2_2
zf-C2H2_4
zf-C2H2_6
zf-C2HC_2
Zf-C2H2_ZNF451_2nd
BTB_KLHL33
zf-C2H2_jaz
zf-C2H2_15
zf-met
zf-C2H2_2
BolA
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
125351708
NCBI-ProteinID:
XP_048202605
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All DBs
Position
5:complement(41591659..42339901)
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AA seq
741 aa
AA seq
DB search
MLERKKPKTAENQKASEENEITQPGGSSAKPGLPCLNFEAVLSPDPALIHSTHSLTNSHA
HTGSSDCDISCKGMTERIHSINLHNFSNSVLETLNEQRNRGHFCDVTVRIHGSMLRAHRC
VLAAGSPFFQDKLLLGYSDIEIPSVVSVQSVQKLIDFMYSGVLRVSQSEALQILTAASIL
QIKTVIDECTRIVSQNVGDVFPGIQDSGQDTPRGTPESGTSGQSSDTESGYLQSHPQHSV
DRIYSALYACSMQNGSGERSFYSGAVVSHHETALGLPRDHHMEDPSWITRIHERSQQMER
YLSTTPETTHCRKQPRPVRIQTLVGNIHIKQEMEDDYDYYGQQRVQILERNESEECTEDT
DQAEGTESEPKGESFDSGVSSSIGTEPDSVEQQFGAGASRDGQAEPAQPEQATEAPAEGG
AQPNQLETGASSPERSNEVEMDNTVITVSNSSDKGILQQPSVNTSIGQPLPSTQLYLRQT
ETLTSNLRMPLTLTSNTQVIGTAGNTYLPALFTTQPAGSGPKPFLFSLPQPLTGQQTQFV
TVSQPGLSTFTAQLPAPQPLASSAGHSTASGQGEKKPYECTLCNKTFTAKQNYVKHMFVH
TGEKPHQCSICWRSFSLKDYLIKHMVTHTGVRAYQCSICNKRFTQKSSLNVHMRLHRGEK
SYECYICKKKFSHKTLLERHVALHSASNGTPPAGTPPGARAGPPGVVACTEGTTYVCSVC
PAKFDQIEQFNDHMRMHVSDG
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgctagaacggaagaaacccaagacagctgaaaaccagaaggcatctgaggagaatgag
attactcagccgggaggatccagcgccaagccgggccttccctgcctgaactttgaagct
gttttgtctccagacccagccctcatccactcaacacattcactgacaaactctcacgct
cacaccgggtcatctgattgtgacatcagttgcaaggggatgaccgagcgcattcacagc
atcaacctgcacaacttcagcaattccgtgctcgagaccctcaacgagcagcgcaaccgt
ggccacttctgtgacgtgacggtgcgcatccacgggagcatgctgcgcgcccaccgctgc
gtgctggccgccggcagccccttcttccaggacaagctgctgctgggctacagcgacatt
gagatcccgtcggtggtgtcggtgcagtcagtgcaaaagctcattgacttcatgtacagc
ggcgtgctacgggtctcccagtccgaggcgctgcagatcctcacggccgccagcatcctg
cagatcaaaactgtcatcgatgagtgcacacgcatcgtgtcccagaacgtgggggacgtg
ttccccggcatccaggactcgggccaggacaccccgaggggcaccccggagtcaggcacg
tcgggccagagcagcgacacggaatcgggctacctgcagagccacccacagcatagcgtg
gacagaatctactcggccctctacgcctgctccatgcagaatgggagcggggagcgctcc
ttctacagcggtgctgtggtcagccaccacgagacagcgctgggcctgccccgcgaccac
cacatggaagaccccagctggatcacacgcatccatgagcgctcgcagcagatggagcgc
tacctgtccaccacccctgagaccacgcactgccgcaagcagccccggcccgtgcgcatc
cagaccctggtgggcaacatccacatcaagcaagagatggaggacgactacgactactac
gggcagcaaagggtgcagatcctggagcggaacgaatccgaggagtgcacagaagacacc
gaccaggccgaaggcaccgagagcgagcccaaaggggaaagcttcgactccggggtcagc
tcctccataggcaccgaacctgactcggtggagcagcagtttggggccggggcatcgcgg
gatggccaggcagagcccgcacaacctgagcaggccacggaagcccccgcggagggtggt
gctcagccaaaccagctggaaacaggtgcctcctcccccgagagaagcaacgaggtggag
atggacaacacagtcatcaccgtcagcaacagctccgataagggcatcctgcagcagcct
tccgtcaacacatctatcgggcagccattgccaagtacccagctctacttacgccagaca
gaaaccctcaccagcaacctgaggatgcctctgaccttgaccagcaacacacaggtcatt
ggcacagctggcaacacctacctgccagccctcttcactacccagcccgcgggcagcggc
cccaagcctttcctcttcagcctgccacagcccctgacaggccagcagacccagtttgtg
acggtgtcccagccgggcctgtccacctttactgcacagctgccagcgccacagcccctg
gcctcctccgcaggccacagcacagccagtgggcaaggcgaaaaaaagccttatgagtgc
actctctgcaacaagactttcaccgccaaacagaactacgtcaagcacatgttcgtacac
acaggtgagaagccccaccaatgcagcatctgttggcgctccttctccttaaaggattac
ctaatcaagcacatggtgacacacacaggcgtgagggcctaccagtgcagtatctgcaac
aagcgcttcacccagaagagctcgctcaacgtgcacatgcgcctccaccgcggggagaag
tcgtacgagtgctacatctgcaagaagaagttctcccacaagacgctccttgagcgacac
gtggccctgcacagcgccagcaacgggaccccccctgcaggcacacccccaggggcccgc
gccggcccgccgggcgtggtggcctgcacggagggcaccacctacgtctgctccgtctgc
ccagctaagtttgaccaaatcgagcagttcaacgaccacatgaggatgcatgtgtctgac
ggataa
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